Network-based Survival Analysis Reveals Subnetwork Signatures for Predicting Outcomes of Ovarian Cancer Treatment

Wei Zhang; Takayo Ota; Viji Shridhar; Jeremy Chien; Baolin Wu; Rui Kuang

doi:10.1371/journal.pcbi.1002975

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Peer-reviewed

Research Article

Network-based Survival Analysis Reveals Subnetwork Signatures for Predicting Outcomes of Ovarian Cancer Treatment

Wei Zhang,

Affiliation Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, Minnesota, United States of America
⨯
Takayo Ota,

Affiliation Department of Laboratory Medicine and Experimental Pathology, Mayo Clinic College of Medicine, Rochester, Minnesota, United States of America
⨯
Viji Shridhar,

Affiliation Department of Laboratory Medicine and Experimental Pathology, Mayo Clinic College of Medicine, Rochester, Minnesota, United States of America
⨯
Jeremy Chien,

Affiliation Department of Laboratory Medicine and Experimental Pathology, Mayo Clinic College of Medicine, Rochester, Minnesota, United States of America
⨯
Baolin Wu,

Affiliation Division of Biostatistics, School of Public Health, University of Minnesota Twin Cities, Minneapolis, Minnesota, United States of America
⨯
Rui Kuang

* E-mail: kuang@cs.umn.edu

Affiliation Department of Computer Science and Engineering, University of Minnesota Twin Cities, Minneapolis, Minnesota, United States of America
⨯

Network-based Survival Analysis Reveals Subnetwork Signatures for Predicting Outcomes of Ovarian Cancer Treatment

Wei Zhang,
Takayo Ota,
Viji Shridhar,
Jeremy Chien,
Baolin Wu,
Rui Kuang

Published: March 21, 2013
https://doi.org/10.1371/journal.pcbi.1002975

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Publisher's Note: Acknowledgement missing and correction to Figure 1

Posted by PLOS_CompBiol on 02 Aug 2013 at 16:00 GMT

The following information was missing from the Acknowledgments: "The results published in this paper are in part based upon data generated by The Cancer Genome Atlas established by the NCI and NHGRI. Information about TCGA and the investigators and institutions who constitute the TCGA research network can be found at http://cancergenome.nih.g.... The dbGaP accession number to the specific version of the TCGA dataset is phs000178.v8.p7."

In the Net-Cox formulation at the top-right of the figure, the network constraint should be subtracted from the likelihood instead of being added to. The corrected figure is available here: http://www.ploscompbiol.o...

No competing interests declared.

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Network-based Survival Analysis Reveals Subnetwork Signatures for Predicting Outcomes of Ovarian Cancer Treatment

Network-based Survival Analysis Reveals Subnetwork Signatures for Predicting Outcomes of Ovarian Cancer Treatment

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Publisher's Note: Acknowledgement missing and correction to Figure 1

Posted by PLOS_CompBiol on 02 Aug 2013 at 16:00 GMT