Genome-Wide Localization of Protein-DNA Binding and Histone Modification by a Bayesian Change-Point Method with ChIP-seq Data

Haipeng Xing; Yifan Mo; Will Liao; Michael Q. Zhang

doi:10.1371/journal.pcbi.1002613

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Peer-reviewed

Research Article

Genome-Wide Localization of Protein-DNA Binding and Histone Modification by a Bayesian Change-Point Method with ChIP-seq Data

Haipeng Xing ,

Contributed equally to this work with: Haipeng Xing, Yifan Mo, Will Liao

* E-mail: xing@ams.sunysb.edu

Affiliation Applied Mathematics and Statistics, Stony Brook University, Stony Brook, New York, United States of America
⨯
Yifan Mo ,

Contributed equally to this work with: Haipeng Xing, Yifan Mo, Will Liao

Affiliations Applied Mathematics and Statistics, Stony Brook University, Stony Brook, New York, United States of America, Computational Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America
⨯
Will Liao ,

Contributed equally to this work with: Haipeng Xing, Yifan Mo, Will Liao

Affiliations Applied Mathematics and Statistics, Stony Brook University, Stony Brook, New York, United States of America, Computational Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America
⨯
Michael Q. Zhang

Current address: Department of Molecular and Cell Biology, The University of Texas at Dallas, Richardson, Texas, United States of America.

Affiliations Computational Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America, Bioinformatics Division, Tsinghua University, Beijing, China
⨯

Genome-Wide Localization of Protein-DNA Binding and Histone Modification by a Bayesian Change-Point Method with ChIP-seq Data

Haipeng Xing,
Yifan Mo,
Will Liao,
Michael Q. Zhang

Published: July 26, 2012
https://doi.org/10.1371/journal.pcbi.1002613

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Update on author affiliation and software availability

Posted by PLOS_CompBiol on 19 Nov 2012 at 16:41 GMT

Next-generation sequencing (NGS) technologies have matured considerably since their introduction and a focus has been placed on developing sophisticated analytical tools to deal with the amassing volumes of data.
http://ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1002613#article1.front1.article-meta1.abstract1.p1

Please note that Michael Zhang moved his lab from CSHL to UTD in 2010. The link to the software has been updated (see under Availability in the Methods section) and queries about software usage and model development should be addressed to michael.zhang@utd.edu.

No competing interests declared.

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Genome-Wide Localization of Protein-DNA Binding and Histone Modification by a Bayesian Change-Point Method with ChIP-seq Data

Genome-Wide Localization of Protein-DNA Binding and Histone Modification by a Bayesian Change-Point Method with ChIP-seq Data

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Update on author affiliation and software availability

Posted by PLOS_CompBiol on 19 Nov 2012 at 16:41 GMT