Understanding Variation in Transcription Factor Binding by Modeling Transcription Factor Genome-Epigenome Interactions

Chieh-Chun Chen; Shu Xiao; Dan Xie; Xiaoyi Cao; Chun-Xiao Song; Ting Wang; Chuan He; Sheng Zhong

doi:10.1371/journal.pcbi.1003367

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Open Access

Peer-reviewed

Research Article

Understanding Variation in Transcription Factor Binding by Modeling Transcription Factor Genome-Epigenome Interactions

Chieh-Chun Chen,

Affiliation Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America
⨯
Shu Xiao,

Affiliation Department of Bioengineering, University of California San Diego, La Jolla, California, United States of America
⨯
Dan Xie,

Affiliation Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America
⨯
Xiaoyi Cao,

Affiliation Department of Bioengineering, University of California San Diego, La Jolla, California, United States of America
⨯
Chun-Xiao Song,

Affiliation Department of Chemistry, University of Chicago, Chicago, Illinois, United States of America
⨯
Ting Wang,

Affiliation Department of Genetics, Washington University in St. Louis, St. Louis, Missouri, United States of America
⨯
Chuan He,

Affiliation Department of Chemistry, University of Chicago, Chicago, Illinois, United States of America
⨯
Sheng Zhong

* E-mail: szhong@ucsd.edu

Affiliations Department of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America, Department of Bioengineering, University of California San Diego, La Jolla, California, United States of America
⨯

Understanding Variation in Transcription Factor Binding by Modeling Transcription Factor Genome-Epigenome Interactions

Chieh-Chun Chen,
Shu Xiao,
Dan Xie,
Xiaoyi Cao,
Chun-Xiao Song,
Ting Wang,
Chuan He,
Sheng Zhong

Published: December 5, 2013
https://doi.org/10.1371/journal.pcbi.1003367

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Supplementary figures in JPEG format

Posted by xiaoyicao03 on 20 Feb 2014 at 00:28 GMT

We have converted all supplementary figures in this article to JPEG format from EPS/PDF and hosted them on our lab website: http://systemsbio.ucsd.ed...

If you want a JPEG format of any supplementary figure, please visit the link above.

Xiaoyi Cao

No competing interests declared.

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Epigenomics
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Epigenetics
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Genomics
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Sequence motif analysis
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Transcription factors
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Cell binding
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Mammalian genomics
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Binding analysis
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Understanding Variation in Transcription Factor Binding by Modeling Transcription Factor Genome-Epigenome Interactions

Understanding Variation in Transcription Factor Binding by Modeling Transcription Factor Genome-Epigenome Interactions

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Supplementary figures in JPEG format

Posted by xiaoyicao03 on 20 Feb 2014 at 00:28 GMT