About the Authors
- Philippe Lemey
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*To whom correspondence should be addressed. E-mail: philippe.lemey@zoo.ox.ac.uk
Affiliation Department of Zoology, University of Oxford, Oxford, United Kingdom
- Sergei L Kosakovsky Pond
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Affiliation Department of Pathology, University of California San Diego, La Jolla, United States of America
- Alexei J Drummond
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Affiliation Department of Computer Science, University of Auckland, Auckland, New Zealand
- Oliver G Pybus
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Affiliation Department of Zoology, University of Oxford, Oxford, United Kingdom
- Beth Shapiro
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Affiliation Department of Zoology, University of Oxford, Oxford, United Kingdom
- Helena Barroso
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Affiliations Centro de Patogénese Molecular, Faculdade de Farmácia de Lisboa, Lisbon, Portugal , Instituto Superior de Ciências da Saúde Egas Moniz, Lisbon, Portugal
- Nuno Taveira
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Affiliations Centro de Patogénese Molecular, Faculdade de Farmácia de Lisboa, Lisbon, Portugal , Instituto Superior de Ciências da Saúde Egas Moniz, Lisbon, Portugal
- Andrew Rambaut
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Affiliation Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, United Kingdom
Competing Interests
The authors have declared that no competing interests exist.
Author Contributions
PL, OGP, and AR designed the analysis strategy. PL analysed the data and wrote the paper. SLKP assisted in HYPHY analyses. AJD and AR provided programming assistance. BS, AJD, and AR assisted in BEAST analyses. NT and HB contributed unpublished HIV-2 transmission chain data.