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Research Article

CSMET: Comparative Genomic Motif Detection via Multi-Resolution Phylogenetic Shadowing

  • Pradipta Ray equal contributor,

    equal contributor Contributed equally to this work with: Pradipta Ray, Suyash Shringarpure

    Affiliation: School of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America

    X
  • Suyash Shringarpure equal contributor,

    equal contributor Contributed equally to this work with: Pradipta Ray, Suyash Shringarpure

    Affiliation: School of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America

    X
  • Mladen Kolar,

    Affiliation: School of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America

    X
  • Eric P. Xing mail

    eric.xing@gmail.com

    Affiliation: School of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America

    X
  • Published: June 06, 2008
  • DOI: 10.1371/journal.pcbi.1000090

About the Authors

Pradipta Ray, Suyash Shringarpure, Mladen Kolar, Eric P. Xing
School of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America

Corresponding Author

Email: eric.xing@gmail.com

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

Conceived and designed the experiments: EX. Performed the experiments: PR SS. Analyzed the data: PR SS MK EX. Wrote the paper: EX. Designed the model: EX.