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Research Article

A Mapping of Drug Space from the Viewpoint of Small Molecule Metabolism

  • James Corey Adams equal contributor,

    equal contributor Contributed equally to this work with: James Corey Adams, Michael J. Keiser

    Affiliation: Graduate Program in Pharmaceutical Sciences and Pharmacogenomics, University of California, San Francisco, California, United States of America

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  • Michael J. Keiser equal contributor,

    equal contributor Contributed equally to this work with: James Corey Adams, Michael J. Keiser

    Affiliation: Graduate Program in Bioinformatics, University of California, San Francisco, California, United States of America

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  • Li Basuino,

    Affiliation: San Francisco General Hospital, University of California San Francisco, San Francisco, California, United States of America

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  • Henry F. Chambers,

    Affiliation: San Francisco General Hospital, University of California San Francisco, San Francisco, California, United States of America

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  • Deok-Sun Lee,

    Affiliations: Center for Complex Network Research and Departments of Physics, Biology, and Computer Science, Northeastern University, Boston, Massachusetts, United States of America, Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, United States of America, Department of Natural Medical Sciences, Inha University, Incheon, Korea

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  • Olaf G. Wiest,

    Affiliation: Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana, United States of America

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  • Patricia C. Babbitt mail

    Babbitt@cgl.ucsf.edu

    Affiliations: Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, California, United States of America, Department of Pharmaceutical Chemistry, University of California, San Francisco, California, United States of America, California Institute for Quantitative Biosciences, University of California, San Francisco, California, United States of America

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  • Published: August 21, 2009
  • DOI: 10.1371/journal.pcbi.1000474

About the Authors

James Corey Adams
Graduate Program in Pharmaceutical Sciences and Pharmacogenomics, University of California, San Francisco, California, United States of America
Michael J. Keiser
Graduate Program in Bioinformatics, University of California, San Francisco, California, United States of America
Li Basuino, Henry F. Chambers
San Francisco General Hospital, University of California San Francisco, San Francisco, California, United States of America
Deok-Sun Lee
Center for Complex Network Research and Departments of Physics, Biology, and Computer Science, Northeastern University, Boston, Massachusetts, United States of America
Deok-Sun Lee
Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, United States of America
Deok-Sun Lee
Department of Natural Medical Sciences, Inha University, Incheon, Korea
Olaf G. Wiest
Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana, United States of America
Patricia C. Babbitt
Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, California, United States of America
Patricia C. Babbitt
Department of Pharmaceutical Chemistry, University of California, San Francisco, California, United States of America
Patricia C. Babbitt
California Institute for Quantitative Biosciences, University of California, San Francisco, California, United States of America

Corresponding Author

Email: Babbitt@cgl.ucsf.edu

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

Conceived and designed the experiments: JCA MJK OGW PCB. Performed the experiments: JCA MJK LB. Analyzed the data: JCA OGW. Contributed reagents/materials/analysis tools: MJK D-SL HFC. Wrote the paper: JCA PCB.