Genome-Wide Modeling of Transcription Preinitiation Complex Disassembly Mechanisms using ChIP-chip Data

Eric Samorodnitsky; B. Franklin Pugh

doi:10.1371/journal.pcbi.1000733

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Open Access

Peer-reviewed

Research Article

Genome-Wide Modeling of Transcription Preinitiation Complex Disassembly Mechanisms using ChIP-chip Data

Eric Samorodnitsky,

Affiliations Center for Eukaryotic Gene Regulation, The Pennsylvania State University, University Park, Pennsylvania, United States of America, Center for Comparative Genomics and Bioinformatics, The Pennsylvania State University, University Park, Pennsylvania, United States of America, Department of Biochemistry and Molecular Biology, North Frear Laboratory, The Pennsylvania State University, University Park, Pennsylvania, United States of America
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B. Franklin Pugh

* E-mail: bfp2@psu.edu

Affiliations Center for Eukaryotic Gene Regulation, The Pennsylvania State University, University Park, Pennsylvania, United States of America, Center for Comparative Genomics and Bioinformatics, The Pennsylvania State University, University Park, Pennsylvania, United States of America, Department of Biochemistry and Molecular Biology, North Frear Laboratory, The Pennsylvania State University, University Park, Pennsylvania, United States of America
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Genome-Wide Modeling of Transcription Preinitiation Complex Disassembly Mechanisms using ChIP-chip Data

Eric Samorodnitsky,
B. Franklin Pugh

Published: April 1, 2010
https://doi.org/10.1371/journal.pcbi.1000733

About the Authors

Eric Samorodnitsky

Affiliations Center for Eukaryotic Gene Regulation, The Pennsylvania State University, University Park, Pennsylvania, United States of America, Center for Comparative Genomics and Bioinformatics, The Pennsylvania State University, University Park, Pennsylvania, United States of America, Department of Biochemistry and Molecular Biology, North Frear Laboratory, The Pennsylvania State University, University Park, Pennsylvania, United States of America

B. Franklin Pugh

* E-mail: bfp2@psu.edu

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

Conceived and designed the experiments: ES BFP. Analyzed the data: ES. Contributed reagents/materials/analysis tools: ES. Wrote the paper: ES BFP.

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DNA transcription
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Chemical dissociation
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Genomics
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Gene regulation
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Transcription factors
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Principal component analysis
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DNA
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Cross-linking
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