Use of Data-Biased Random Walks on Graphs for the Retrieval of Context-Specific Networks from Genomic Data

Kakajan Komurov; Michael A. White; Prahlad T. Ram

doi:10.1371/journal.pcbi.1000889

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Open Access

Peer-reviewed

Research Article

Use of Data-Biased Random Walks on Graphs for the Retrieval of Context-Specific Networks from Genomic Data

Kakajan Komurov ,

* E-mail: kkomurov@mdanderson.org

Affiliation Department of Systems Biology, University of Texas M.D. Anderson Cancer Center, Houston, Texas, United States of America
⨯
Michael A. White,

Affiliation Department of Cell Biology, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America
⨯
Prahlad T. Ram

Affiliation Department of Systems Biology, University of Texas M.D. Anderson Cancer Center, Houston, Texas, United States of America
⨯

Use of Data-Biased Random Walks on Graphs for the Retrieval of Context-Specific Networks from Genomic Data

Kakajan Komurov,
Michael A. White,
Prahlad T. Ram

Published: August 19, 2010
https://doi.org/10.1371/journal.pcbi.1000889

About the Authors

Kakajan Komurov

* E-mail: kkomurov@mdanderson.org

Affiliation Department of Systems Biology, University of Texas M.D. Anderson Cancer Center, Houston, Texas, United States of America

Michael A. White

Affiliation Department of Cell Biology, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America

Prahlad T. Ram

Affiliation Department of Systems Biology, University of Texas M.D. Anderson Cancer Center, Houston, Texas, United States of America

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

Conceived and designed the experiments: KK PTR. Performed the experiments: KK. Analyzed the data: KK. Contributed reagents/materials/analysis tools: MAW. Wrote the paper: KK PTR.

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Genetic networks
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Gene expression
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Random walk
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Cell cycle and cell division
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Genome analysis
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Genomics
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Apoptosis
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Microarrays
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