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Research Article

Differentially Expressed RNA from Public Microarray Data Identifies Serum Protein Biomarkers for Cross-Organ Transplant Rejection and Other Conditions

  • Rong Chen,

    Affiliations: Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America, Lucile Packard Children's Hospital, Palo Alto, California, United States of America

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  • Tara K. Sigdel,

    Affiliations: Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America, Lucile Packard Children's Hospital, Palo Alto, California, United States of America

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  • Li Li,

    Affiliations: Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America, Lucile Packard Children's Hospital, Palo Alto, California, United States of America

    X
  • Neeraja Kambham,

    Affiliation: Department of Pathology, Stanford University School of Medicine, Stanford, California, United States of America

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  • Joel T. Dudley,

    Affiliations: Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America, Lucile Packard Children's Hospital, Palo Alto, California, United States of America

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  • Szu-chuan Hsieh,

    Affiliations: Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America, Lucile Packard Children's Hospital, Palo Alto, California, United States of America

    X
  • R. Bryan Klassen,

    Affiliations: Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America, Lucile Packard Children's Hospital, Palo Alto, California, United States of America

    X
  • Amery Chen,

    Affiliations: Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America, Lucile Packard Children's Hospital, Palo Alto, California, United States of America

    X
  • Tuyen Caohuu,

    Affiliation: Division of Cardiovascular Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, California, United States of America

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  • Alexander A. Morgan,

    Affiliations: Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America, Lucile Packard Children's Hospital, Palo Alto, California, United States of America

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  • Hannah A. Valantine,

    Affiliation: Division of Cardiovascular Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, California, United States of America

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  • Kiran K. Khush,

    Affiliation: Division of Cardiovascular Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, California, United States of America

    X
  • Minnie M. Sarwal mail,

    abutte@stanford.edu (AJB); msarwal@stanford.edu (MMS)

    Affiliations: Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America, Lucile Packard Children's Hospital, Palo Alto, California, United States of America

    These authors are joint senior authors on this work.

    X
  • Atul J. Butte mail

    abutte@stanford.edu (AJB); msarwal@stanford.edu (MMS)

    Affiliations: Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America, Lucile Packard Children's Hospital, Palo Alto, California, United States of America

    These authors are joint senior authors on this work.

    X
  • Published: September 23, 2010
  • DOI: 10.1371/journal.pcbi.1000940

About the Authors

Rong Chen, Tara K. Sigdel, Li Li, Joel T. Dudley, Szu-chuan Hsieh, R. Bryan Klassen, Amery Chen, Alexander A. Morgan, Minnie M. Sarwal, Atul J. Butte
Department of Pediatrics, Stanford University School of Medicine, Stanford, California, United States of America
Rong Chen, Tara K. Sigdel, Li Li, Joel T. Dudley, Szu-chuan Hsieh, R. Bryan Klassen, Amery Chen, Alexander A. Morgan, Minnie M. Sarwal, Atul J. Butte
Lucile Packard Children's Hospital, Palo Alto, California, United States of America
Neeraja Kambham
Department of Pathology, Stanford University School of Medicine, Stanford, California, United States of America
Tuyen Caohuu, Hannah A. Valantine, Kiran K. Khush
Division of Cardiovascular Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, California, United States of America

Corresponding Authors

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

Conceived and designed the experiments: RC MMS AJB. Performed the experiments: RC TKS NK ScH. Analyzed the data: RC. Contributed reagents/materials/analysis tools: RC TKS LL JTD RBK AC TC AAM HAV KKK. Wrote the paper: RC AJB.