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Research Article

Benchmarking Ontologies: Bigger or Better?

  • Lixia Yao,

    Affiliations: Department of Biomedical Informatics, Columbia University, New York, New York, United States of America, Institute for Genomics and Systems Biology, University of Chicago, Chicago, Illinois, United States of America

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  • Anna Divoli,

    Affiliations: Institute for Genomics and Systems Biology, University of Chicago, Chicago, Illinois, United States of America, Department of Medicine, University of Chicago, Chicago, Illinois, United States of America

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  • Ilya Mayzus,

    Affiliations: Institute for Genomics and Systems Biology, University of Chicago, Chicago, Illinois, United States of America, Department of Medicine, University of Chicago, Chicago, Illinois, United States of America

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  • James A. Evans,

    Affiliations: Computation Institute, University of Chicago, Chicago, Illinois, United States of America, Sociology Department, University of Chicago, Chicago, Illinois, United States of America

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  • Andrey Rzhetsky mail

    arzhetsky@uchicago.edu

    Affiliations: Institute for Genomics and Systems Biology, University of Chicago, Chicago, Illinois, United States of America, Department of Medicine, University of Chicago, Chicago, Illinois, United States of America, Computation Institute, University of Chicago, Chicago, Illinois, United States of America, Department of Human Genetics, University of Chicago, Chicago, Illinois, United States of America

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  • Published: January 13, 2011
  • DOI: 10.1371/journal.pcbi.1001055

About the Authors

Lixia Yao
Department of Biomedical Informatics, Columbia University, New York, New York, United States of America
Lixia Yao, Anna Divoli, Ilya Mayzus, Andrey Rzhetsky
Institute for Genomics and Systems Biology, University of Chicago, Chicago, Illinois, United States of America
Anna Divoli, Ilya Mayzus, Andrey Rzhetsky
Department of Medicine, University of Chicago, Chicago, Illinois, United States of America
James A. Evans, Andrey Rzhetsky
Computation Institute, University of Chicago, Chicago, Illinois, United States of America
James A. Evans
Sociology Department, University of Chicago, Chicago, Illinois, United States of America
Andrey Rzhetsky
Department of Human Genetics, University of Chicago, Chicago, Illinois, United States of America

Corresponding Author

Email: arzhetsky@uchicago.edu

Competing Interests

The authors have declared that no competing interests exist.

Author Contributions

Conceived and designed the experiments: LY AD JAE AR. Performed the experiments: LY AD IM. Analyzed the data: LY AD IM AR. Wrote the paper: LY JAE AR.