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Research Article

Network-Based Prediction and Analysis of HIV Dependency Factors

  • T. M. Murali mail,

    murali@cs.vt.edu (TMM) (TM); honey@u.washington.edu (MGK) (MK)

    Affiliation: Department of Computer Science, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, United States of America

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  • Matthew D. Dyer equal contributor,

    equal contributor Contributed equally to this work with: Matthew D. Dyer, David Badger

    Affiliation: Applied Biosystems, Foster City, California, United States of America

    X
  • David Badger equal contributor,

    equal contributor Contributed equally to this work with: Matthew D. Dyer, David Badger

    Affiliation: Department of Computer Science, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, United States of America

    X
  • Brett M. Tyler ,

    Affiliation: Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, United States of America

    These authors also contributed equally to this work.

    X
  • Michael G. Katze mail

    murali@cs.vt.edu (TMM) (TM); honey@u.washington.edu (MGK) (MK)

    Affiliation: Department of Microbiology, University of Washington, Seattle, Washington, United States of America

    These authors also contributed equally to this work.

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  • Published: September 22, 2011
  • DOI: 10.1371/journal.pcbi.1002164

About the Authors

T. M. Murali, David Badger
Department of Computer Science, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, United States of America
Matthew D. Dyer
Applied Biosystems, Foster City, California, United States of America
Brett M. Tyler
Virginia Bioinformatics Institute, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, United States of America
Michael G. Katze
Department of Microbiology, University of Washington, Seattle, Washington, United States of America

Corresponding Authors

Competing Interests

I have read the journal's policy and have the following conflicts: MDD is employed by and owns stock in Life Technologies.

Author Contributions

Conceived and designed the experiments: TMM MDD. Performed the experiments: TMM. Analyzed the data: TMM MDD BMT MGK. Contributed reagents/materials/analysis tools: TMM MDD DB BMT. Wrote the paper: TMM MDD BMT MGK. Conceived and designed the algorithm used in analysis: TMM BMT. Designed and implemented the software used in analysis: TMM DB.