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Research Article

ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun

  • Ruiqiang Li equal contributor,

    equal contributor Contributed equally to this work with: Ruiqiang Li, Jia Ye, Songgang Li, Jing Wang

    Affiliations: James D. Watson Institute of Genome Sciences of Zhejiang University, Hangzhou, China, Beijing Institute of Genomics of Chinese Academy of Sciences, Beijing Genomics Institute, Beijing, China

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  • Jia Ye equal contributor,

    equal contributor Contributed equally to this work with: Ruiqiang Li, Jia Ye, Songgang Li, Jing Wang

    Affiliations: James D. Watson Institute of Genome Sciences of Zhejiang University, Hangzhou, China, Beijing Institute of Genomics of Chinese Academy of Sciences, Beijing Genomics Institute, Beijing, China

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  • Songgang Li equal contributor,

    equal contributor Contributed equally to this work with: Ruiqiang Li, Jia Ye, Songgang Li, Jing Wang

    Affiliations: Beijing Institute of Genomics of Chinese Academy of Sciences, Beijing Genomics Institute, Beijing, China, College of Life Sciences, Peking University, Beijing, China

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  • Jing Wang equal contributor,

    equal contributor Contributed equally to this work with: Ruiqiang Li, Jia Ye, Songgang Li, Jing Wang

    Affiliation: Beijing Institute of Genomics of Chinese Academy of Sciences, Beijing Genomics Institute, Beijing, China

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  • Yujun Han,

    Affiliation: Beijing Institute of Genomics of Chinese Academy of Sciences, Beijing Genomics Institute, Beijing, China

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  • Chen Ye,

    Affiliation: Beijing Institute of Genomics of Chinese Academy of Sciences, Beijing Genomics Institute, Beijing, China

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  • Jian Wang,

    Affiliations: James D. Watson Institute of Genome Sciences of Zhejiang University, Hangzhou, China, Beijing Institute of Genomics of Chinese Academy of Sciences, Beijing Genomics Institute, Beijing, China

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  • Huanming Yang,

    Affiliations: James D. Watson Institute of Genome Sciences of Zhejiang University, Hangzhou, China, Beijing Institute of Genomics of Chinese Academy of Sciences, Beijing Genomics Institute, Beijing, China

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  • Jun Yu,

    Affiliations: James D. Watson Institute of Genome Sciences of Zhejiang University, Hangzhou, China, Beijing Institute of Genomics of Chinese Academy of Sciences, Beijing Genomics Institute, Beijing, China

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  • Gane Ka-Shu Wong mail,

    To whom correspondence should be addressed. E-mail: gksw@genomics.org.cn (GKW), wangj@genomics.org.cn (JW)

    Affiliations: James D. Watson Institute of Genome Sciences of Zhejiang University, Hangzhou, China, Beijing Institute of Genomics of Chinese Academy of Sciences, Beijing Genomics Institute, Beijing, China, UW Genome Center, Department of Medicine, University of Washington, Seattle, Washington, United States of America

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  • Jun Wang mail

    To whom correspondence should be addressed. E-mail: gksw@genomics.org.cn (GKW), wangj@genomics.org.cn (JW)

    Affiliations: James D. Watson Institute of Genome Sciences of Zhejiang University, Hangzhou, China, Beijing Institute of Genomics of Chinese Academy of Sciences, Beijing Genomics Institute, Beijing, China, The Institute of Human Genetics, University of Aarhus, Aarhus, Denmark, Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark

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  • Published: September 23, 2005
  • DOI: 10.1371/journal.pcbi.0010043

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