Supplementary Table S1c: Clusters with Tandem Repeats

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chr1:18009084-18017953
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
18009084	18009282	+	22.5	1735	1939	-1480	L2	L2	LINE
18009303	18009606	-	28.3	7684	8013	-29	L1MC4	L1	LINE
18009623	18010943	-	22.2	4754	6142	-24	L1ME1	L1	LINE
18010944	18011239	-	15.3	1	306	-6	AluJb	Alu	SINE
18011240	18011499	-	22.5	4509	4753	-1393	L1MD	L1	LINE
18011500	18011746	-	11.0	76	312	0	AluSg/x	Alu	SINE
18011747	18011874	-	13.3	1	129	-183	AluSq/x	Alu	SINE
18011875	18013169	-	22.5	3154	4508	-1638	L1MD	L1	LINE
18013175	18013295	+	14.1	1	132	-214	MER7A	MER2_type	DNA
18013298	18013427	+	23.9	2	132	-11	FLAM_C	Alu	SINE
18013429	18013514	+	17.4	2806	2894	-135	Tigger3(Golem)	MER2_type	DNA
18013532	18013601	+	17.1	2806	2877	-152	Tigger3(Golem)	MER2_type	DNA
18013633	18013704	+	16.7	2806	2877	-152	Tigger3(Golem)	MER2_type	DNA
18013736	18013807	+	15.3	2806	2877	-152	Tigger3(Golem)	MER2_type	DNA
18013839	18013910	+	9.7	2806	2877	-152	Tigger3(Golem)	MER2_type	DNA
18013942	18014013	+	12.5	2806	2877	-152	Tigger3(Golem)	MER2_type	DNA
18014035	18014106	+	15.3	2806	2877	-152	Tigger3(Golem)	MER2_type	DNA
18014138	18014258	+	12.4	2806	2926	-103	Tigger3(Golem)	MER2_type	DNA
18014259	18015014	-	23.7	1389	2171	-4469	L1MEa	L1	LINE
18015044	18015272	-	21.8	6057	6291	0	L1MA7	L1	LINE
18015283	18015585	-	16.2	1	298	-14	AluJb	Alu	SINE
18015625	18015834	-	24.1	851	1067	-5480	L1MEa	L1	LINE
18015837	18016165	-	21.8	521	853	-5681	L1MEa	L1	LINE
18016285	18016424	-	27.3	7518	7678	-364	L1MC4	L1	LINE
18016425	18016772	+	29.6	1927	2304	-1115	L2	L2	LINE
18016773	18017083	-	10.6	1	310	-2	AluSx	Alu	SINE
18017084	18017953	+	30.2	2305	3325	-94	L2	L2	LINE

chr1:91900472-91910675
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
91900472	91900588	-	26.3	3297	3414	-5	L2	L2	LINE
91900596	91901056	-	5.9	1	463	0	LTR2	ERV1	LTR
91901057	91906145	-	6.6	1806	6896	0	Harlequin	ERV1	LTR
91906127	91906217	-	5.9	1333	1422	-5474	Harlequin	ERV1	LTR
91906244	91906788	-	5.9	770	1332	-5564	Harlequin	ERV1	LTR
91906821	91906860	-	10.0	769	808	-6088	Harlequin	ERV1	LTR
91906857	91906896	-	10.0	769	808	-6088	Harlequin	ERV1	LTR
91906893	91906932	-	10.0	769	808	-6088	Harlequin	ERV1	LTR
91906929	91906968	-	10.0	769	808	-6088	Harlequin	ERV1	LTR
91906965	91907005	-	14.6	765	805	-7008	Harlequin	ERV1	LTR
91907001	91907040	-	10.0	769	808	-6088	Harlequin	ERV1	LTR
91907037	91907076	-	10.0	769	808	-6088	Harlequin	ERV1	LTR
91907073	91907112	-	7.5	769	808	-6088	Harlequin	ERV1	LTR
91907109	91907148	-	7.5	769	808	-6088	Harlequin	ERV1	LTR
91907145	91907180	-	8.3	773	808	-6088	Harlequin	ERV1	LTR
91907181	91907220	-	10.0	769	808	-6088	Harlequin	ERV1	LTR
91907217	91907256	-	7.5	769	808	-6088	Harlequin	ERV1	LTR
91907253	91907292	-	7.5	769	808	-6088	Harlequin	ERV1	LTR
91907289	91907328	-	10.0	769	808	-6088	Harlequin	ERV1	LTR
91907325	91907364	-	10.0	769	808	-6088	Harlequin	ERV1	LTR
91907361	91907400	-	10.0	769	808	-6088	Harlequin	ERV1	LTR
91907397	91907436	-	10.0	769	808	-6088	Harlequin	ERV1	LTR
91907433	91907472	-	10.0	769	808	-6088	Harlequin	ERV1	LTR
91907469	91907508	-	7.5	769	808	-6088	Harlequin	ERV1	LTR
91907505	91908049	-	6.3	263	808	-6088	Harlequin	ERV1	LTR
91908043	91908432	-	12.7	1	387	-6509	Harlequin	ERV1	LTR
91908433	91908892	-	8.3	1	463	0	LTR2	ERV1	LTR
91908903	91909218	-	28.8	2959	3289	-130	L2	L2	LINE
91909266	91909766	+	25.6	5254	5762	-2046	L1MC4a	L1	LINE
91909767	91910076	+	12.9	1	310	0	AluSg	Alu	SINE
91910077	91910329	+	25.6	5763	6030	-1778	L1MC4a	L1	LINE
91910392	91910675	-	30.3	2572	2885	-534	L2	L2	LINE

chr1:245878999-245880437
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
245878999	245879154	-	11.5	745	903	0	MER4D	ERV1	LTR
245879151	245879256	-	10.4	714	800	-103	MER4D	ERV1	LTR
245879252	245879306	-	12.7	509	564	-100	MER4A	ERV1	LTR
245879304	245879358	-	10.9	714	769	-103	MER4D0	ERV1	LTR
245879359	245879405	-	10.6	718	765	-107	MER4D0	ERV1	LTR
245879406	245879460	-	9.1	714	769	-103	MER4D0	ERV1	LTR
245879461	245879562	-	12.3	714	796	-107	MER4D0	ERV1	LTR
245879559	245879613	-	12.7	714	769	-103	MER4D0	ERV1	LTR
245879617	245879661	-	15.6	718	762	-110	MER4D0	ERV1	LTR
245879662	245880437	-	13.5	1	800	-103	MER4D	ERV1	LTR

chr2:95860533-95865476
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
95860533	95861233	+	20.5	5	1166	-5815	L1PA12	L1	LINE
95861238	95861516	-	23.6	802	1090	-5891	L1PA10	L1	LINE
95861520	95861636	-	25.5	793	900	-6081	L1PA10	L1	LINE
95861749	95861838	-	17.8	814	904	-6077	L1PA10	L1	LINE
95861852	95861939	-	23.9	815	903	-6078	L1PA10	L1	LINE
95861953	95862071	-	22.9	793	903	-6078	L1PA10	L1	LINE
95862067	95862155	-	23.9	814	901	-6080	L1PA10	L1	LINE
95862169	95862662	-	22.7	799	1174	-5807	L1PA12	L1	LINE
95862682	95862764	-	15.7	815	897	-6084	L1PA12	L1	LINE
95862779	95862864	-	15.1	814	903	-6078	L1PA12	L1	LINE
95862889	95862980	-	25.0	799	892	-6089	L1PA12	L1	LINE
95862981	95863083	-	22.6	798	904	-6077	L1PA12	L1	LINE
95863087	95863398	-	25.7	799	1169	-5812	L1PA12	L1	LINE
95863399	95863512	-	25.0	798	903	-6078	L1PA12	L1	LINE
95863513	95863601	-	21.6	814	901	-6080	L1PA12	L1	LINE
95863615	95863914	-	25.3	814	1174	-5807	L1PA12	L1	LINE
95863931	95864031	-	22.0	799	900	-6081	L1PA12	L1	LINE
95864032	95864434	-	24.4	810	1174	-5807	L1PA12	L1	LINE
95864444	95864507	-	20.3	838	904	-6077	L1PA12	L1	LINE
95864506	95865476	+	24.8	734	1627	-5890	L1PA12	L1	LINE

chr2:114082492-114085741
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
114082492	114082603	+	23.6	500	623	-4733	MER31-int	ERV1	LTR
114082645	114082984	+	25.9	173	515	-4421	MER31-int	ERV1	LTR
114082960	114083323	+	26.7	620	1063	-3873	MER31-int	ERV1	LTR
114083330	114083680	-	18.8	167	551	-3	MLT2B3	ERVL	LTR
114083681	114084042	-	15.0	1	375	0	THE1C	MaLR	LTR
114084043	114084269	-	20.4	3	274	-388	MLT2B3	ERVL	LTR
114084295	114084362	-	20.6	3	72	-482	MLT2B3	ERVL	LTR
114084363	114084455	-	21.6	3	96	-501	MLT2B3	ERVL	LTR
114084456	114084548	-	21.6	3	96	-501	MLT2B3	ERVL	LTR
114084574	114084641	-	19.1	3	72	-482	MLT2B3	ERVL	LTR
114084667	114084734	-	20.6	3	72	-482	MLT2B3	ERVL	LTR
114084760	114084827	-	19.1	3	72	-482	MLT2B3	ERVL	LTR
114084853	114084920	-	19.1	3	72	-482	MLT2B3	ERVL	LTR
114084946	114085013	-	22.1	3	72	-482	MLT2B3	ERVL	LTR
114085039	114085106	-	17.6	3	72	-482	MLT2B3	ERVL	LTR
114085107	114085199	-	16.1	3	97	-483	MLT2B3	ERVL	LTR
114085225	114085291	-	22.4	3	72	-482	MLT2B3	ERVL	LTR
114085295	114085741	+	21.6	1063	1506	-3430	MER31-int	ERV1	LTR

chr2:128696761-128704217
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
128696761	128696830	-	18.8	5749	5816	-817	L1M	L1	LINE
128696836	128696861	-	15.5	401	423	-5	MSTC	MaLR	LTR
128696862	128697276	-	17.4	136	594	-1	LTR49	ERV1	LTR
128697277	128697585	-	10.9	1	309	0	AluSq	Alu	SINE
128697586	128697724	-	17.4	2	135	-460	LTR49	ERV1	LTR
128697725	128697844	-	15.5	284	400	-28	MSTC	MaLR	LTR
128697848	128698064	-	16.6	3907	4123	-2414	L1M	L1	LINE
128698065	128698366	-	16.6	1	302	-10	AluJb	Alu	SINE
128698393	128698528	-	18.8	2	142	-1	FLAM_C	Alu	SINE
128698530	128698679	-	18.2	3394	3537	-3000	L1M	L1	LINE
128698680	128698979	+	10.0	1	299	-13	AluSx	Alu	SINE
128698980	128699052	-	18.2	3322	3393	-3144	L1M	L1	LINE
128699053	128699353	-	9.3	1	302	-10	AluSx	Alu	SINE
128699354	128699679	-	18.2	2990	3321	-3216	L1M	L1	LINE
128699680	128699853	+	16.6	1	178	-250	MSTB	MaLR	LTR
128699840	128699871	+	6.2	102	133	-324	MSTB2	MaLR	LTR
128699877	128699908	+	6.2	102	133	-324	MSTB2	MaLR	LTR
128699914	128699945	+	6.2	102	133	-324	MSTB2	MaLR	LTR
128699951	128699982	+	6.2	102	133	-324	MSTB2	MaLR	LTR
128699988	128700019	+	6.2	102	133	-324	MSTB2	MaLR	LTR
128700025	128700056	+	6.2	102	133	-324	MSTB2	MaLR	LTR
128700062	128700093	+	6.2	102	133	-324	MSTB2	MaLR	LTR
128700099	128700130	+	6.2	102	133	-324	MSTB2	MaLR	LTR
128700136	128700167	+	6.2	102	133	-324	MSTB	MaLR	LTR
128700173	128700283	+	16.3	86	190	-236	MSTB	MaLR	LTR
128700284	128700590	+	14.4	1	306	-6	AluJo	Alu	SINE
128700591	128700824	+	16.3	191	426	0	MSTB	MaLR	LTR
128700825	128701093	-	13.9	2690	2994	-3543	L1M	L1	LINE
128701095	128701505	+	15.3	1	426	-2	MSTC	MaLR	LTR
128701506	128701665	-	15.2	2521	2689	-3848	L1M	L1	LINE
128701668	128701954	-	10.1	24	310	-2	AluSx	Alu	SINE
128701956	128702133	+	16.7	170	347	0	AluSg/x	Alu	SINE
128702238	128702347	-	21.7	2383	2498	-4135	L1M	L1	LINE
128702424	128702734	+	9.5	1	305	-6	AluY	Alu	SINE
128702776	128702957	-	21.7	2211	2387	-4246	L1M	L1	LINE
128702958	128703197	+	15.2	8	336	-1	MER7A	MER2_type	DNA
128703198	128703317	-	22.4	2075	2209	-4424	L1M	L1	LINE
128703318	128703623	-	18.6	5	310	-2	AluSx	Alu	SINE
128703624	128703691	-	22.4	2013	2074	-4559	L1M	L1	LINE
128703692	128703981	-	10.7	10	298	-12	AluSg	Alu	SINE
128703982	128704217	-	22.4	1789	2012	-4621	L1M	L1	LINE

chr2:241429813-241435302
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
241429813	241429951	-	16.8	476	653	0	LTR49	ERV1	LTR
241429952	241430257	+	15.3	1	309	-3	AluJo	Alu	SINE
241430258	241430282	-	23.9	481	507	-146	MER39B	ERV1	LTR
241430295	241430345	+	14.0	1	50	-850	MER4D1	ERV1	LTR
241430350	241430743	-	10.7	104	508	-3	LTR10F	ERV1	LTR
241430744	241430794	-	11.8	107	159	-352	LTR10F	ERV1	LTR
241430795	241430878	-	8.3	104	197	-314	LTR10F	ERV1	LTR
241430902	241430987	-	8.1	104	197	-314	LTR10F	ERV1	LTR
241431011	241431096	-	8.1	104	197	-314	LTR10F	ERV1	LTR
241431120	241431204	-	5.9	104	197	-314	LTR10F	ERV1	LTR
241431228	241431310	-	3.6	104	197	-314	LTR10F	ERV1	LTR
241431311	241431361	-	11.8	107	159	-352	LTR10F	ERV1	LTR
241431362	241431447	-	8.1	104	197	-314	LTR10F	ERV1	LTR
241431471	241431551	-	6.2	108	197	-314	LTR10F	ERV1	LTR
241431553	241431738	-	8.6	1	197	-314	LTR10F	ERV1	LTR
241431740	241432595	+	16.0	49	895	-8	MER4D	ERV1	LTR
241432602	241432761	-	16.2	205	415	-180	LTR49	ERV1	LTR
241432762	241433122	+	14.6	1	373	-2	THE1C	MaLR	LTR
241433125	241434727	+	10.9	1	1580	0	THE1C-int	MaLR	LTR
241434728	241435098	+	11.2	1	375	0	THE1C	MaLR	LTR
241435099	241435302	-	10.3	3	207	-388	LTR49	ERV1	LTR

chr4:183278667-183284028
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
183278667	183279134	-	31.1	2814	3278	-141	L2	L2	LINE
183279135	183279444	-	11.3	1	311	-1	AluSx	Alu	SINE
183279445	183279640	-	30.3	2621	2813	-606	L2	L2	LINE
183279656	183281293	-	13.3	706	2383	-35	Tigger1	MER2_type	DNA
183281320	183282002	-	13.3	19	705	-1713	Tigger1	MER2_type	DNA
183282007	183282184	-	25.8	2439	2616	-803	L2	L2	LINE
183282185	183282498	-	12.5	1	312	0	AluSx	Alu	SINE
183282499	183282876	-	25.8	2046	2438	-981	L2	L2	LINE
183282881	183283093	+	20.4	7	230	-2261	Tigger7	MER2_type	DNA
183283089	183283154	+	20.0	166	230	-475	Tigger7	MER2_type	DNA
183283132	183283215	+	18.8	150	230	-321	Tigger7	MER2_type	DNA
183283219	183283276	+	15.8	174	230	-2261	Tigger7	MER2_type	DNA
183283272	183283337	+	20.0	166	230	-475	Tigger7	MER2_type	DNA
183283333	183283550	+	18.9	166	395	-2096	Tigger7	MER2_type	DNA
183283561	183283632	+	19.4	2410	2482	-9	Tigger7	MER2_type	DNA
183283643	183284028	-	27.0	1699	2055	-1364	L2	L2	LINE

chr4:185113171-185116769
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
185113171	185113842	-	28.1	1683	2397	-110	HAL1	L1	LINE
185113945	185114349	-	27.5	313	819	-1688	HAL1	L1	LINE
185114425	185114509	-	26.3	7931	8015	-27	L1MC4	L1	LINE
185114631	185115118	-	26.3	7434	7930	-112	L1MC4	L1	LINE
185115119	185115295	+	3.4	5952	6136	-18	L1PA5	L1	LINE
185115333	185115979	-	26.3	6777	7433	-609	L1MC4	L1	LINE
185115986	185116040	-	14.6	6778	6825	-1217	L1MC4	L1	LINE
185116049	185116100	-	13.3	6781	6825	-1217	L1MC4	L1	LINE
185116113	185116168	-	10.2	6776	6824	-1218	L1MC4	L1	LINE
185116176	185116231	-	14.3	6776	6824	-1218	L1MC4	L1	LINE
185116238	185116294	-	14.0	6776	6825	-1217	L1MC4	L1	LINE
185116301	185116466	-	19.6	6570	6740	-1068	L1MC4a	L1	LINE
185116621	185116769	-	27.1	51	207	-2300	HAL1	L1	LINE

chr4:189354756-189356151
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
189354756	189355200	+	15.2	16	429	-356	LTR1	ERV1	LTR
189355200	189355260	+	7.3	374	429	-356	LTR1	ERV1	LTR
189355320	189355380	+	16.4	362	424	-402	LTR1B	ERV1	LTR
189355380	189355440	+	13.1	362	424	-402	LTR1B	ERV1	LTR
189355440	189355500	+	16.4	362	424	-402	LTR1B	ERV1	LTR
189355500	189355560	+	14.8	362	424	-402	LTR1B	ERV1	LTR
189355560	189355620	+	13.1	362	424	-402	LTR1B	ERV1	LTR
189355621	189355680	+	16.7	363	424	-402	LTR1B	ERV1	LTR
189355680	189355739	+	15.0	362	423	-403	LTR1B	ERV1	LTR
189355740	189356151	+	12.4	374	785	0	LTR1	ERV1	LTR

chr5:2132993-2142793
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
2132993	2134322	+	27.4	310	1641	-4759	L1MEc	L1	LINE
2134348	2135069	+	20.3	6219	6925	-860	L1MC3	L1	LINE
2135070	2135131	+	14.5	6863	6924	-861	L1MC3	L1	LINE
2135132	2135195	+	14.1	6862	6925	-860	L1MC3	L1	LINE
2135195	2135258	+	12.5	6862	6925	-860	L1MC3	L1	LINE
2135258	2135321	+	14.1	6862	6925	-860	L1MC3	L1	LINE
2135304	2135384	+	12.8	6848	6925	-860	L1MC3	L1	LINE
2135384	2135428	+	11.1	6862	6906	-879	L1MC3	L1	LINE
2135430	2135510	+	16.7	6848	6925	-860	L1MC3	L1	LINE
2135511	2135573	+	14.3	6863	6925	-860	L1MC3	L1	LINE
2135573	2135636	+	12.5	6862	6925	-860	L1MC3	L1	LINE
2135636	2135699	+	15.6	6862	6925	-860	L1MC3	L1	LINE
2135682	2135762	+	14.1	6848	6925	-860	L1MC3	L1	LINE
2135763	2135825	+	12.7	6863	6925	-860	L1MC3	L1	LINE
2135825	2135888	+	15.6	6862	6925	-860	L1MC3	L1	LINE
2135889	2135954	+	22.7	6863	6928	-857	L1MC3	L1	LINE
2136202	2136407	+	21.0	7003	7207	-578	L1MC3	L1	LINE
2136408	2136669	+	11.1	1	286	-25	AluY	Alu	SINE
2136726	2137276	+	21.0	7208	7785	0	L1MC3	L1	LINE
2137270	2138793	+	23.2	20	1654	-4746	L1MEc	L1	LINE
2138794	2138926	+	17.6	2	133	-10	FLAM_C	Alu	SINE
2138927	2139500	+	23.2	1655	2270	-4130	L1MEc	L1	LINE
2139507	2140476	+	13.7	5	973	-329	HSMAR2	Mariner	DNA
2140477	2141070	-	11.6	1	602	0	LTR43	ERV1	LTR
2141071	2141409	+	16.1	974	1301	-1	HSMAR2	Mariner	DNA
2141410	2141512	+	20.4	2277	2379	-4021	L1MEc	L1	LINE
2141570	2141597	+	20.7	2369	2388	-4012	L1MEc	L1	LINE
2141598	2141903	+	17.0	4	307	-5	AluJb	Alu	SINE
2141904	2142793	+	25.8	2285	3261	-2958	L1MEc	L1	LINE

chr5:133841124-133852948
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
133841124	133841163	-	5.0	5616	5660	-461	L1M5	L1	LINE
133841164	133841577	+	19.5	1	412	-74	MER66B	ERV1	LTR
133841596	133841731	+	12.1	1	132	-178	AluSg	Alu	SINE
133841732	133841848	+	11.1	1	118	-191	AluSc	Alu	SINE
133841873	133842057	+	11.1	119	304	-5	AluSc	Alu	SINE
133842058	133842161	+	13.5	383	486	0	MER66B	ERV1	LTR
133842266	133842547	+	19.5	1	296	-16	AluJb	Alu	SINE
133842585	133842866	-	12.2	1	280	-32	AluSx	Alu	SINE
133842876	133843043	-	20.2	1	166	-10	FRAM	Alu	SINE
133843050	133843291	+	25.1	5031	5309	-837	L1M5	L1	LINE
133843292	133843838	-	18.9	2	550	0	MER44B	MER2_type	DNA
133843839	133843852	+	25.1	5310	5322	-824	L1M5	L1	LINE
133843842	133844056	+	27.0	2942	3181	-2965	L1M5	L1	LINE
133844059	133844347	-	11.1	6	294	-16	AluSg	Alu	SINE
133844348	133844638	+	25.6	3184	3478	-2668	L1M5	L1	LINE
133844639	133844929	+	12.4	1	291	-22	AluSq	Alu	SINE
133844930	133845287	+	25.6	3479	3844	-2302	L1M5	L1	LINE
133845288	133845586	+	8.8	1	311	-2	AluSp	Alu	SINE
133845587	133845688	+	25.6	3845	3944	-2202	L1M5	L1	LINE
133845689	133845986	-	8.1	1	301	-12	AluSq	Alu	SINE
133846012	133846322	-	4.8	1	311	0	AluY	Alu	SINE
133846323	133846494	+	25.6	3945	4103	-2043	L1M5	L1	LINE
133846495	133846599	-	9.6	202	305	-6	AluY	Alu	SINE
133846600	133846635	-	13.9	205	240	-60	Alu	Alu	SINE
133846636	133846693	-	17.2	191	248	-52	Alu	Alu	SINE
133846677	133846731	-	23.6	215	269	-33	AluSg/x	Alu	SINE
133846730	133846787	-	15.5	191	248	-52	Alu	Alu	SINE
133846771	133846825	-	21.8	203	257	-43	Alu	Alu	SINE
133846824	133846864	-	12.2	208	248	-52	Alu	Alu	SINE
133846865	133847132	-	9.0	1	268	-43	AluY	Alu	SINE
133847153	133847299	+	35.4	3955	4102	-2044	L1M5	L1	LINE
133847301	133847400	-	10.1	202	300	-11	AluY	Alu	SINE
133847401	133847436	-	13.9	205	240	-60	Alu	Alu	SINE
133847437	133847494	-	15.5	191	248	-52	Alu	Alu	SINE
133847495	133847532	-	13.2	203	240	-60	Alu	Alu	SINE
133847531	133847588	-	15.5	191	248	-52	Alu	Alu	SINE
133847572	133847626	-	21.8	203	257	-43	Alu	Alu	SINE
133847625	133847665	-	12.2	208	248	-52	Alu	Alu	SINE
133847666	133847933	-	9.3	1	268	-43	AluY	Alu	SINE
133847996	133848017	+	26.5	4160	4178	-1968	L1M5	L1	LINE
133848018	133848322	+	12.0	2	312	0	AluSx	Alu	SINE
133848323	133848717	+	26.5	4179	4609	-1537	L1M5	L1	LINE
133848718	133849002	+	16.2	1	273	-39	AluJo	Alu	SINE
133849003	133850059	+	26.3	4610	5724	-516	L1M5	L1	LINE
133850061	133850133	-	33.8	368	450	0	LTR16A	ERVL	LTR
133850134	133850518	+	17.9	1	361	-65	MSTB	MaLR	LTR
133850519	133850831	-	13.4	1	313	0	AluSq	Alu	SINE
133850832	133850896	+	17.9	362	426	0	MSTB	MaLR	LTR
133850897	133851249	-	33.8	4	367	-83	LTR16A	ERVL	LTR
133851359	133851823	-	19.4	5478	5957	-209	L1ME1	L1	LINE
133851824	133852134	-	11.6	1	311	-1	AluSx	Alu	SINE
133852135	133852696	-	20.0	4832	5477	-689	L1ME1	L1	LINE
133852720	133852948	-	33.2	4791	5016	-1130	L1M5	L1	LINE

chr5:175565061-175571358
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
175565061	175565292	-	17.6	4472	4716	-1430	L1M4	L1	LINE
175565293	175565601	+	9.1	1	310	0	AluSg	Alu	SINE
175565602	175565694	-	17.6	4379	4471	-1675	L1M4	L1	LINE
175565695	175565927	-	16.0	192	428	0	MSTA	MaLR	LTR
175565928	175566221	-	13.9	1	294	-18	AluSx	Alu	SINE
175566229	175566525	-	12.8	1	302	-10	AluSx	Alu	SINE
175566526	175566668	-	16.0	58	191	-237	MSTA	MaLR	LTR
175566669	175566720	-	13.5	58	110	-318	MSTA	MaLR	LTR
175566721	175566772	-	13.5	58	110	-318	MSTA	MaLR	LTR
175566773	175566824	-	11.5	58	110	-318	MSTA	MaLR	LTR
175566877	175566928	-	11.5	58	110	-318	MSTA	MaLR	LTR
175566929	175566980	-	15.4	58	110	-318	MSTA	MaLR	LTR
175567085	175567136	-	13.5	58	110	-318	MSTA	MaLR	LTR
175567137	175567188	-	11.5	58	110	-318	MSTA	MaLR	LTR
175567189	175567240	-	9.6	58	110	-318	MSTA	MaLR	LTR
175567241	175567312	-	16.7	38	110	-318	MSTA	MaLR	LTR
175567315	175568929	-	14.3	1	1635	-16	MSTA-int	MaLR	LTR
175568930	175568986	-	15.1	390	428	0	MSTA	MaLR	LTR
175568987	175569298	-	14.0	2	310	-2	AluSx	Alu	SINE
175569299	175569672	-	15.1	1	389	-39	MSTA	MaLR	LTR
175569673	175569769	-	15.9	4294	4381	-1765	L1M4	L1	LINE
175569770	175570059	-	12.4	1	291	-21	AluSx	Alu	SINE
175570060	175571358	-	15.9	2987	4293	-1853	L1M4	L1	LINE

chr5:177058798-177065789
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
177058798	177060127	+	15.0	2987	4293	-1853	L1M4	L1	LINE
177060128	177060417	+	11.0	1	291	-21	AluSx	Alu	SINE
177060418	177060514	+	15.0	4294	4381	-1765	L1M4	L1	LINE
177060515	177060889	+	14.4	1	389	-39	MSTA	MaLR	LTR
177060890	177061178	+	15.6	2	291	-21	AluSx	Alu	SINE
177061179	177061256	+	14.4	390	428	0	MSTA	MaLR	LTR
177061257	177061518	+	14.8	1	263	-1388	MSTA-int	MaLR	LTR
177061519	177061814	-	3.7	1	295	-16	AluY	Alu	SINE
177061815	177063176	+	14.8	264	1635	-16	MSTA-int	MaLR	LTR
177063179	177063250	+	15.3	38	110	-318	MSTA	MaLR	LTR
177063251	177063302	+	15.4	58	110	-318	MSTA	MaLR	LTR
177063303	177063354	+	13.5	58	110	-318	MSTA	MaLR	LTR
177063355	177063406	+	13.5	58	110	-318	MSTA	MaLR	LTR
177063407	177063458	+	13.5	58	110	-318	MSTA	MaLR	LTR
177063459	177063510	+	11.5	58	110	-318	MSTA	MaLR	LTR
177063511	177063562	+	11.5	58	110	-318	MSTA	MaLR	LTR
177063563	177063614	+	13.5	58	110	-318	MSTA	MaLR	LTR
177063615	177063666	+	13.5	58	110	-318	MSTA	MaLR	LTR
177063667	177063718	+	15.4	58	110	-318	MSTA	MaLR	LTR
177063719	177063770	+	15.4	58	110	-318	MSTA	MaLR	LTR
177063771	177063822	+	13.5	58	110	-318	MSTA	MaLR	LTR
177063823	177063874	+	13.5	58	110	-318	MSTA	MaLR	LTR
177063875	177063926	+	11.5	58	110	-318	MSTA	MaLR	LTR
177063927	177063978	+	13.5	58	110	-318	MSTA	MaLR	LTR
177063979	177064030	+	13.5	58	110	-318	MSTA	MaLR	LTR
177064031	177064082	+	13.5	58	110	-318	MSTA	MaLR	LTR
177064083	177064134	+	13.5	58	110	-318	MSTA	MaLR	LTR
177064135	177064186	+	11.5	58	110	-318	MSTA	MaLR	LTR
177064187	177064329	+	14.9	58	194	-234	MSTA	MaLR	LTR
177064330	177064621	+	13.8	1	296	-16	AluSx	Alu	SINE
177064629	177064922	+	13.9	1	294	-18	AluSx	Alu	SINE
177064923	177065155	+	14.9	195	428	0	MSTA	MaLR	LTR
177065156	177065255	+	16.7	4379	4475	-1671	L1M4	L1	LINE
177065256	177065564	-	8.4	1	310	0	AluSg	Alu	SINE
177065565	177065789	+	16.7	4476	4716	-1430	L1M4	L1	LINE

chr5:180273505-180283529
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
180273505	180273682	+	30.2	2589	2768	-3378	L1M5	L1	LINE
180273683	180274070	+	17.8	4	407	-1	MLT1A1	MaLR	LTR
180274071	180274263	+	30.2	2769	2965	-3181	L1M5	L1	LINE
180274290	180275233	+	26.2	2	1006	-5135	L1MB1	L1	LINE
180275249	180275545	+	14.7	3737	4040	-2103	L1M2	L1	LINE
180275547	180275888	-	18.7	3	396	0	MSTD	MaLR	LTR
180275907	180276288	+	13.9	3013	3408	-2796	L1MB1	L1	LINE
180276291	180276383	-	17.2	2397	2489	-2	Tigger7	MER2_type	DNA
180276382	180276563	-	23.1	3	185	-520	Tigger7	MER2_type	DNA
180276567	180276611	+	15.6	3408	3452	-2752	L1MB1	L1	LINE
180276636	180276680	+	15.6	3408	3452	-2752	L1MB1	L1	LINE
180276695	180276749	+	13.8	3406	3455	-2752	L1MB1	L1	LINE
180276774	180276818	+	11.1	3408	3452	-2752	L1MB1	L1	LINE
180276843	180276887	+	11.1	3408	3452	-2752	L1MB1	L1	LINE
180276912	180276956	+	11.1	3408	3452	-2752	L1MB1	L1	LINE
180276981	180277025	+	11.1	3408	3452	-2752	L1MB1	L1	LINE
180277050	180277094	+	11.1	3408	3452	-2752	L1MB1	L1	LINE
180277089	180277347	+	17.4	3384	3641	-2566	L1MB1	L1	LINE
180277353	180277664	+	7.7	1	311	0	AluY	Alu	SINE
180277665	180278137	+	17.7	3633	4070	-2134	L1MB1	L1	LINE
180278138	180279036	-	14.6	1	900	0	MER4D1	ERV1	LTR
180279037	180279734	+	17.7	4071	4811	-1393	L1MB1	L1	LINE
180279735	180279814	-	7.5	1	80	0	MADE1	Mariner	DNA
180279815	180281221	+	19.8	4748	6119	-181	L1MA6	L1	LINE
180280761	180281266	+	21.3	5617	6158	-31	L1MB1	L1	LINE
180281314	180281480	+	21.3	6159	6313	-21	L1MA10	L1	LINE
180281549	180282786	-	11.6	2156	3404	-2742	L1PREC2	L1	LINE
180282819	180283529	+	30.3	3713	4437	-1709	L1M5	L1	LINE

chr5:180832122-180835373
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
180832122	180832568	-	21.1	1063	1506	-3430	MER34B-int	ERV1	LTR
180832572	180832639	+	25.0	3	72	-482	MLT2B3	ERVL	LTR
180832665	180832757	+	20.3	3	96	-501	MLT2B3	ERVL	LTR
180832758	180832825	+	19.1	3	72	-482	MLT2B3	ERVL	LTR
180832851	180832943	+	21.6	3	96	-501	MLT2B3	ERVL	LTR
180832944	180833011	+	19.1	3	72	-482	MLT2B3	ERVL	LTR
180833037	180833104	+	16.2	3	72	-482	MLT2B3	ERVL	LTR
180833130	180833197	+	19.1	3	72	-482	MLT2B3	ERVL	LTR
180833223	180833290	+	19.1	3	72	-482	MLT2B3	ERVL	LTR
180833316	180833383	+	20.6	3	72	-482	MLT2B3	ERVL	LTR
180833409	180833476	+	16.2	3	72	-482	MLT2B3	ERVL	LTR
180833502	180833569	+	17.6	3	72	-482	MLT2B5	ERVL	LTR
180833595	180833821	+	20.4	3	274	-388	MLT2B3	ERVL	LTR
180833822	180834183	+	13.9	1	375	0	THE1C	MaLR	LTR
180834184	180834533	+	23.1	159	597	-4	MLT2B5	ERVL	LTR
180834541	180834905	-	27.3	620	1063	-3873	MER34B-int	ERV1	LTR
180834881	180835220	-	26.5	173	515	-4421	MER34B-int	ERV1	LTR
180835262	180835373	-	19.2	500	623	-4733	MER34B-int	ERV1	LTR

chr6:161650260-161659077
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
161650260	161650372	-	27.7	7930	8042	0	L1MC4	L1	LINE
161650380	161650675	-	11.7	19	313	0	AluSp	Alu	SINE
161650676	161651180	-	9.0	1	508	-3	LTR10F	ERV1	LTR
161651181	161656136	-	9.6	1	5102	0	HERVIP10FH	ERV1	LTR
161656137	161656537	-	9.3	104	511	0	LTR10F	ERV1	LTR
161656543	161656649	-	3.0	104	210	-301	LTR10F	ERV1	LTR
161656655	161656684	-	0.0	127	156	-355	LTR10F	ERV1	LTR
161656685	161656896	-	5.4	1	210	-301	LTR10F	ERV1	LTR
161656993	161657875	+	14.7	45	977	-254	Tigger3b	MER2_type	DNA
161657876	161658167	-	13.0	1	295	-18	AluSq	Alu	SINE
161658168	161658355	+	14.7	978	1170	-61	Tigger3b	MER2_type	DNA
161658356	161658644	-	8.0	10	298	-14	AluSx	Alu	SINE
161658645	161658725	+	14.7	1171	1231	0	Tigger3b	MER2_type	DNA
161658920	161659077	-	27.4	7742	7912	-130	L1MC4	L1	LINE

chr6:170475891-170479754
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
170475891	170476548	-	24.7	2154	2780	-3439	L1MEc	L1	LINE
170476572	170476881	+	9.0	1	300	-13	AluSq	Alu	SINE
170476902	170476947	+	6.5	1	46	-34	MADE1	Mariner	DNA
170476948	170477266	-	25.0	1968	8008	-4290	L1MC4	L1	LINE
170477080	170477510	-	23.3	5961	6416	-16	L1MD2	L1	LINE
170477541	170477740	-	19.4	163	340	-1	MER58B	MER1_type	DNA
170477741	170478056	-	16.4	1	311	-1	AluJo	Alu	SINE
170478067	170478358	-	5.8	1	292	-19	AluY	Alu	SINE
170478359	170478508	-	19.4	7	162	-179	MER58B	MER1_type	DNA
170478548	170478650	-	20.4	2587	2693	-336	Tigger3(Golem)	MER2_type	DNA
170478644	170478746	-	19.4	2587	2691	-338	Tigger3(Golem)	MER2_type	DNA
170478737	170478842	-	21.7	2587	2694	-335	Tigger3(Golem)	MER2_type	DNA
170478836	170478939	-	22.1	2584	2691	-338	Tigger3(Golem)	MER2_type	DNA
170478930	170479356	-	12.7	2284	2691	-338	Tigger3(Golem)	MER2_type	DNA
170479488	170479754	-	28.7	1266	1561	-4839	L1MEc	L1	LINE

chr7:1964627-1969750
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
1964627	1965130	+	27.0	624	1174	-5226	L1ME1	L1	LINE
1965131	1965434	+	13.9	1	307	-5	AluSx	Alu	SINE
1965435	1967829	+	27.5	1175	5177	-1042	L1ME1	L1	LINE
1967831	1967961	+	11.4	1	133	-242	THE1C	MaLR	LTR
1967945	1968027	+	18.5	51	133	-242	THE1C	MaLR	LTR
1968011	1968093	+	17.3	51	133	-242	THE1C	MaLR	LTR
1968077	1968159	+	19.8	51	133	-242	THE1C	MaLR	LTR
1968143	1968222	+	20.5	51	130	-245	THE1C	MaLR	LTR
1968209	1968290	+	18.8	51	132	-243	THE1C	MaLR	LTR
1968269	1968581	+	15.9	45	353	-2	THE1A	MaLR	LTR
1968585	1968947	+	19.3	5180	5550	-689	L1ME1	L1	LINE
1968954	1969135	+	13.4	1	171	-5	FRAM	Alu	SINE
1969187	1969750	+	34.3	5633	6234	-5	L1ME1	L1	LINE

chr8:10920764-10922384
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
10920764	10920948	+	20.9	9	191	-133	MER33	MER1_type	DNA
10920952	10921105	-	15.6	2880	3028	-1	Tigger3(Golem)	MER2_type	DNA
10921129	10921180	-	13.5	2880	2936	-93	Tigger3(Golem)	MER2_type	DNA
10921195	10921252	-	10.5	2882	2943	-86	Tigger3(Golem)	MER2_type	DNA
10921253	10921302	-	20.0	2882	2936	-93	Tigger3(Golem)	MER2_type	DNA
10921303	10921354	-	11.5	2880	2936	-93	Tigger3(Golem)	MER2_type	DNA
10921378	10921429	-	9.6	2880	2936	-93	Tigger3(Golem)	MER2_type	DNA
10921432	10921486	-	11.3	2875	2932	-97	Tigger3(Golem)	MER2_type	DNA
10921494	10921553	-	13.6	2880	2943	-86	Tigger3(Golem)	MER2_type	DNA
10921593	10921652	-	11.9	2880	2943	-86	Tigger3(Golem)	MER2_type	DNA
10921655	10921685	-	9.7	2902	2932	-97	Tigger3(Golem)	MER2_type	DNA
10921694	10921750	-	14.3	2882	2942	-87	Tigger3(Golem)	MER2_type	DNA
10921751	10921805	-	16.4	2877	2936	-93	Tigger3(Golem)	MER2_type	DNA
10921826	10921877	-	11.5	2880	2936	-93	Tigger3(Golem)	MER2_type	DNA
10921893	10921952	-	18.6	2880	2943	-86	Tigger3(Golem)	MER2_type	DNA
10921976	10922229	-	14.2	2	254	-92	MER7A	MER2_type	DNA
10922233	10922384	+	14.1	195	322	-2	MER33	MER1_type	DNA

chr8:122738771-122740537
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
122738771	122738955	-	16.3	4168	4362	-1778	L1M3	L1	LINE
122738938	122738957	-	13.3	6146	6164	-1	L1PA15	L1	LINE
122738958	122739009	-	1.9	6105	6161	-4	L1PA15	L1	LINE
122739010	122739050	-	13.3	6105	6145	-20	L1PA15	L1	LINE
122739051	122739091	-	4.9	6105	6145	-20	L1PA15	L1	LINE
122739092	122739132	-	4.9	6105	6145	-20	L1PA15	L1	LINE
122739133	122739173	-	4.9	6105	6145	-15	L1PREC2	L1	LINE
122739174	122739214	-	2.4	6105	6145	-15	L1PREC2	L1	LINE
122739215	122739255	-	2.4	6105	6145	-20	L1PA15	L1	LINE
122739256	122739296	-	4.9	6105	6145	-15	L1PREC2	L1	LINE
122739297	122739337	-	2.4	6105	6145	-15	L1PREC2	L1	LINE
122739338	122739564	-	8.6	5925	6145	-15	L1PREC2	L1	LINE
122739570	122739996	-	18.3	3743	4150	-1990	L1M3	L1	LINE
122739997	122740290	-	10.9	18	311	-1	AluSx	Alu	SINE
122740291	122740537	-	18.3	3508	3742	-2398	L1M3	L1	LINE

chr8:122861964-122864322
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
122861964	122862049	+	28.1	2552	2630	-789	L2	L2	LINE
122862050	122862344	-	6.1	1	295	-16	AluY	Alu	SINE
122862345	122862872	+	28.9	2631	3192	-227	L2	L2	LINE
122862887	122863202	-	8.9	141	464	0	LTR7B	ERV1	LTR
122863203	122863255	-	7.5	185	238	-226	LTR7B	ERV1	LTR
122863256	122863382	-	11.8	141	278	-186	LTR7B	ERV1	LTR
122863406	122863532	-	12.6	141	278	-186	LTR7B	ERV1	LTR
122863533	122863636	-	13.5	163	269	-195	LTR7B	ERV1	LTR
122863646	122863918	-	6.2	1	278	-186	LTR7B	ERV1	LTR
122864058	122864190	+	18.8	1	133	0	FLAM_A	Alu	SINE
122864219	122864322	+	31.1	3305	3415	-4	L2	L2	LINE

chr8:145804715-145811191
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
145804715	145805590	-	27.1	3860	4804	-1415	L1MEc	L1	LINE
145805591	145805894	-	10.0	1	302	-8	AluSg	Alu	SINE
145805895	145806622	-	27.1	3109	3859	-2360	L1MEc	L1	LINE
145806623	145806916	+	7.5	1	293	-18	AluY	Alu	SINE
145806917	145807023	-	27.1	3003	3108	-3111	L1MEc	L1	LINE
145807024	145807311	-	11.2	1	286	-26	AluSx	Alu	SINE
145807312	145807926	-	27.1	2312	3002	-3217	L1MEc	L1	LINE
145807927	145808219	+	17.1	1	300	-13	AluSq	Alu	SINE
145808220	145808314	+	22.1	177	271	-41	AluJb	Alu	SINE
145808315	145808363	+	16.3	224	272	-30	AluJ/FRAM	Alu	SINE
145808364	145808411	+	16.7	225	272	-30	AluJ/FRAM	Alu	SINE
145808412	145808507	+	18.5	89	272	-30	AluJ/FRAM	Alu	SINE
145808508	145808555	+	16.7	225	272	-30	AluJ/FRAM	Alu	SINE
145808556	145808651	+	18.5	89	272	-30	AluJ/FRAM	Alu	SINE
145808652	145808699	+	16.7	225	272	-30	AluJ/FRAM	Alu	SINE
145808700	145808747	+	16.7	225	272	-30	AluJ/FRAM	Alu	SINE
145808748	145808843	+	18.5	89	272	-30	AluJ/FRAM	Alu	SINE
145808844	145808891	+	16.7	225	272	-30	AluJ/FRAM	Alu	SINE
145808892	145808939	+	16.7	225	272	-30	AluJ/FRAM	Alu	SINE
145808962	145809054	+	19.4	197	291	-21	AluJb	Alu	SINE
145809062	145810547	-	21.2	762	2340	-4060	L1MEc	L1	LINE
145810548	145810845	-	9.1	1	298	-14	AluSx	Alu	SINE
145810846	145811191	-	21.2	400	761	-5639	L1MEc	L1	LINE

chr9:135147896-135150343
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
135147896	135148139	-	13.4	217	480	-2	MER51E	ERV1	LTR
135148261	135148525	-	15.0	49	309	-3	AluJo	Alu	SINE
135148552	135148673	-	16.4	209	330	-131	MER65C	ERV1	LTR
135148729	135148765	-	10.8	209	245	-216	MER65C	ERV1	LTR
135148792	135149788	+	15.1	1	1002	0	LTR5B	ERVK	LTR
135149796	135149832	-	13.5	209	245	-216	MER65C	ERV1	LTR
135149925	135149961	-	16.2	209	245	-216	MER65C	ERV1	LTR
135149957	135149993	-	13.5	209	245	-216	MER65C	ERV1	LTR
135150081	135150198	-	16.2	156	266	-195	MER65C	ERV1	LTR
135150198	135150343	-	10.3	86	231	-251	MER51E	ERV1	LTR

chr10:1491080-1493171
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
1491080	1491675	+	12.2	5336	5951	-212	L1PA13	L1	LINE
1491676	1491968	+	13.0	1	295	-18	AluSq	Alu	SINE
1491969	1492149	+	12.2	5952	6122	-41	L1PA13	L1	LINE
1492165	1492217	+	19.6	6072	6122	-38	L1PREC2	L1	LINE
1492199	1492251	+	19.6	6072	6122	-38	L1PREC2	L1	LINE
1492335	1492403	+	22.4	6072	6141	-19	L1PREC2	L1	LINE
1492390	1492455	+	21.0	6061	6122	-38	L1PREC2	L1	LINE
1492437	1492489	+	21.6	6072	6122	-41	L1PA13	L1	LINE
1492471	1492523	+	17.6	6072	6122	-38	L1PREC2	L1	LINE
1492508	1492555	+	17.4	6075	6120	-41	L1PA14	L1	LINE
1492539	1492625	+	20.7	6072	6141	-38	L1PREC2	L1	LINE
1492811	1492863	+	21.6	6072	6122	-38	L1PREC2	L1	LINE
1492845	1492913	+	22.4	6072	6141	-19	L1PREC2	L1	LINE
1492900	1492965	+	19.4	6061	6122	-38	L1PREC2	L1	LINE
1492947	1492998	+	20.0	6072	6121	-39	L1PREC2	L1	LINE
1492981	1493033	+	21.6	6072	6122	-38	L1PREC2	L1	LINE
1493015	1493067	+	19.6	6072	6122	-38	L1PREC2	L1	LINE
1493092	1493171	+	12.8	6081	6163	0	L1PA13	L1	LINE

chr10:116684136-116685757
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
116684136	116684160	-	23.4	3394	3419	0	L2	L2	LINE
116684161	116684479	+	9.4	1	313	0	AluSq	Alu	SINE
116684480	116684620	-	23.4	3255	3393	-26	L2	L2	LINE
116684622	116684987	-	15.2	52	425	-1	MSTB	MaLR	LTR
116684989	116685060	-	13.9	53	124	-304	MSTA	MaLR	LTR
116685059	116685133	-	14.7	53	127	-301	MSTA	MaLR	LTR
116685132	116685206	-	14.7	53	127	-301	MSTA	MaLR	LTR
116685205	116685279	-	14.7	53	127	-301	MSTA	MaLR	LTR
116685278	116685352	-	13.3	53	127	-301	MSTA	MaLR	LTR
116685351	116685425	-	13.3	53	127	-301	MSTA	MaLR	LTR
116685424	116685498	-	12.0	53	127	-301	MSTA	MaLR	LTR
116685497	116685618	-	13.9	5	126	-300	MSTB	MaLR	LTR
116685623	116685757	-	28.6	3136	3260	-159	L2	L2	LINE

chr12:131975201-131985541
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
131975201	131975682	+	12.7	1	533	-367	MER4D1	ERV1	LTR
131975683	131975967	+	15.8	1	306	-6	AluJb	Alu	SINE
131975968	131976083	+	12.7	534	659	-241	MER4D1	ERV1	LTR
131976107	131976169	+	9.5	1	63	-255	AluSg1	Alu	SINE
131976170	131976628	+	7.8	1	448	-2	LTR7	ERV1	LTR
131976631	131980865	+	18.3	1	4017	-2512	HERVH	ERV1	LTR
131980866	131981174	-	8.1	2	311	-2	AluSp	Alu	SINE
131981175	131981342	+	7.9	4015	4181	-2372	HERVH	ERV1	LTR
131981337	131981734	+	7.8	6283	6680	-1033	HERVH	ERV1	LTR
131981735	131981812	+	19.2	6600	6678	-1035	HERVH	ERV1	LTR
131981815	131981895	+	13.6	6600	6680	-1033	HERVH	ERV1	LTR
131981896	131981976	+	13.6	6600	6680	-1033	HERVH	ERV1	LTR
131981977	131982057	+	13.6	6600	6680	-1033	HERVH	ERV1	LTR
131982058	131982138	+	13.6	6600	6680	-1033	HERVH	ERV1	LTR
131982139	131982216	+	19.2	6600	6678	-1035	HERVH	ERV1	LTR
131982219	131982299	+	13.6	6600	6680	-1033	HERVH	ERV1	LTR
131982300	131982380	+	14.8	6600	6680	-1033	HERVH	ERV1	LTR
131982381	131982461	+	16.1	6600	6680	-1033	HERVH	ERV1	LTR
131982462	131982541	+	18.8	6600	6680	-1033	HERVH	ERV1	LTR
131982542	131982622	+	13.6	6600	6680	-1033	HERVH	ERV1	LTR
131982623	131982703	+	16.1	6600	6680	-1033	HERVH	ERV1	LTR
131982704	131982784	+	16.1	6600	6680	-1033	HERVH	ERV1	LTR
131982785	131982865	+	13.6	6600	6680	-1033	HERVH	ERV1	LTR
131982866	131982945	+	17.5	6600	6680	-1033	HERVH	ERV1	LTR
131982946	131983026	+	14.8	6600	6680	-1033	HERVH	ERV1	LTR
131983027	131983107	+	12.3	6600	6680	-1033	HERVH	ERV1	LTR
131983108	131983187	+	15.0	6600	6680	-1033	HERVH	ERV1	LTR
131983188	131983268	+	14.8	6600	6680	-1033	HERVH	ERV1	LTR
131983269	131983349	+	16.1	6600	6680	-1033	HERVH	ERV1	LTR
131983350	131983430	+	14.8	6600	6680	-1033	HERVH	ERV1	LTR
131983431	131983510	+	11.2	6600	6680	-1033	HERVH	ERV1	LTR
131983511	131983590	+	12.5	6600	6680	-1033	HERVH	ERV1	LTR
131983591	131984707	+	8.5	6600	7713	0	HERVH	ERV1	LTR
131984708	131985158	+	6.1	1	448	-2	LTR7	ERV1	LTR
131985161	131985407	+	9.9	59	301	-8	AluSg1	Alu	SINE
131985408	131985541	+	17.2	765	900	0	MER4D1	ERV1	LTR

chr13:113224343-113230575
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
113224343	113224640	-	17.9	4279	4589	-1948	L1MDa	L1	LINE
113224674	113224955	-	7.6	2	283	-28	AluY	Alu	SINE
113224957	113225245	-	11.8	1	291	-19	AluSg	Alu	SINE
113225246	113226657	-	17.9	2793	4278	-2259	L1MDa	L1	LINE
113226658	113226951	-	12.3	1	303	-9	AluSx	Alu	SINE
113226952	113227479	-	20.5	2230	2792	-3745	L1MDa	L1	LINE
113227487	113227905	+	19.9	2	434	-797	Tigger3b	MER2_type	DNA
113227902	113227952	+	19.6	2177	2227	-802	Tigger3(Golem)	MER2_type	DNA
113227953	113228007	+	16.4	2177	2231	-798	Tigger3(Golem)	MER2_type	DNA
113228004	113228058	+	20.0	2177	2231	-798	Tigger3(Golem)	MER2_type	DNA
113228106	113228160	+	20.0	2177	2231	-798	Tigger3(Golem)	MER2_type	DNA
113228208	113228262	+	23.6	2177	2231	-798	Tigger3(Golem)	MER2_type	DNA
113228263	113228313	+	25.5	2182	2232	-797	Tigger3(Golem)	MER2_type	DNA
113228310	113228356	+	23.4	2177	2223	-806	Tigger3(Golem)	MER2_type	DNA
113228361	113228753	+	15.9	2177	2580	-449	Tigger3(Golem)	MER2_type	DNA
113228754	113229035	+	16.0	1	283	-29	AluJo	Alu	SINE
113229036	113229439	+	15.9	2581	3028	-1	Tigger3(Golem)	MER2_type	DNA
113229440	113230575	-	27.6	1027	2223	-4410	L1MDa	L1	LINE

chr17:245915-249940
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
245915	246042	-	23.6	317	468	0	LTR37B	ERV1	LTR
246183	246493	+	4.9	1	308	-3	AluY	Alu	SINE
246516	247079	-	18.1	475	1068	0	Tigger2b_Pri	MER2_type	DNA
247080	247368	-	17.2	9	312	0	AluJo	Alu	SINE
247369	247528	-	18.1	331	474	-594	Tigger2b_Pri	MER2_type	DNA
247524	247588	-	18.5	336	404	-664	Tigger2b_Pri	MER2_type	DNA
247589	247662	-	18.9	331	404	-664	Tigger2b_Pri	MER2_type	DNA
247658	247726	-	18.8	336	404	-664	Tigger2b_Pri	MER2_type	DNA
247728	247795	-	19.1	336	403	-665	Tigger2b_Pri	MER2_type	DNA
247796	247869	-	18.9	331	404	-664	Tigger2b_Pri	MER2_type	DNA
247865	247938	-	17.6	331	404	-664	Tigger2b_Pri	MER2_type	DNA
247934	248007	-	18.9	331	404	-664	Tigger2b_Pri	MER2_type	DNA
248003	248071	-	17.4	336	404	-664	Tigger2b_Pri	MER2_type	DNA
248072	248145	-	17.6	331	404	-664	Tigger2b_Pri	MER2_type	DNA
248141	248214	-	18.9	331	404	-664	Tigger2b_Pri	MER2_type	DNA
248210	248283	-	17.6	331	404	-664	Tigger2b_Pri	MER2_type	DNA
248279	248352	-	18.9	331	404	-664	Tigger2b_Pri	MER2_type	DNA
248348	248421	-	18.9	331	404	-664	Tigger2b_Pri	MER2_type	DNA
248417	248448	-	18.9	377	404	-664	Tigger2b_Pri	MER2_type	DNA
248449	248756	-	10.8	1	305	-8	AluSq	Alu	SINE
248757	248802	-	18.9	331	376	-692	Tigger2b_Pri	MER2_type	DNA
248798	248995	-	13.8	197	404	-664	Tigger2b_Pri	MER2_type	DNA
248999	249125	+	22.1	2	128	-15	FLAM_C	Alu	SINE
249283	249492	+	16.0	95	291	-21	AluJo	Alu	SINE
249493	249686	-	11.9	9	207	-861	Tigger2b_Pri	MER2_type	DNA
249698	249940	-	21.1	94	304	-164	LTR37B	ERV1	LTR

chr17:5083597-5086174
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
5083597	5083760	+	24.7	10	177	-413	MLT1H1	MaLR	LTR
5083764	5083856	+	8.6	2	94	-215	AluSg1	Alu	SINE
5083892	5084089	+	21.9	25	190	-274	LTR7B	ERV1	LTR
5084187	5084255	+	23.5	123	190	-282	LTR7Y	ERV1	LTR
5084229	5084295	+	23.9	123	190	-282	LTR7Y	ERV1	LTR
5084310	5084378	+	20.6	123	190	-282	LTR7Y	ERV1	LTR
5084394	5084462	+	23.5	123	190	-282	LTR7Y	ERV1	LTR
5084477	5084549	+	19.4	123	189	-283	LTR7Y	ERV1	LTR
5084519	5084586	+	20.9	123	190	-282	LTR7Y	ERV1	LTR
5084628	5084710	+	21.9	107	190	-282	LTR7Y	ERV1	LTR
5084752	5084834	+	21.9	107	190	-282	LTR7Y	ERV1	LTR
5084891	5084959	+	23.5	123	190	-282	LTR7Y	ERV1	LTR
5084933	5084999	+	23.9	123	190	-282	LTR7Y	ERV1	LTR
5085014	5085085	+	18.2	123	189	-283	LTR7Y	ERV1	LTR
5085082	5085205	+	19.3	107	190	-282	LTR7Y	ERV1	LTR
5085220	5085600	+	20.5	107	464	0	LTR7B	ERV1	LTR
5085601	5085803	+	8.4	93	296	-16	AluSg1	Alu	SINE
5085807	5086174	+	27.1	168	555	0	MLT1H1	MaLR	LTR

chr18:65578567-65580563
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
65578567	65578609	+	13.9	3	45	-257	AluJb	Alu	SINE
65578629	65578733	-	16.2	502	600	-134	MER50	ERV1	LTR
65578724	65579161	-	25.2	122	563	-171	MER50	ERV1	LTR
65579164	65579261	-	7.1	122	222	-512	MER50	ERV1	LTR
65579264	65579361	-	9.2	122	222	-512	MER50	ERV1	LTR
65579364	65579461	-	8.2	122	222	-512	MER50	ERV1	LTR
65579464	65579687	-	14.7	1	222	-512	MER50	ERV1	LTR
65579688	65580015	-	13.1	6882	7197	-8	MER50-int	ERV1	LTR
65580050	65580294	-	17.1	513	734	0	MER50	ERV1	LTR
65580295	65580361	+	18.9	51	133	-179	AluJb	Alu	SINE
65580410	65580563	+	18.9	134	288	-24	AluJb	Alu	SINE

chr19:34325264-34326765
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
34325264	34325380	-	23.4	1348	1469	-3	MLT1H-int	MaLR	LTR
34325586	34325865	+	16.8	5854	6136	-25	L1PA17	L1	LINE
34325840	34325880	+	12.2	6084	6124	-42	L1PA17	L1	LINE
34325880	34325917	+	13.2	6086	6123	-43	L1PA17	L1	LINE
34325918	34325956	+	7.7	6086	6124	-42	L1PA17	L1	LINE
34325986	34326034	+	12.2	6076	6124	-42	L1PA17	L1	LINE
34326034	34326071	+	7.9	6086	6123	-43	L1PA17	L1	LINE
34326100	34326152	+	17.5	6074	6126	-40	L1PA16	L1	LINE
34326187	34326225	+	7.7	6086	6124	-42	L1PA17	L1	LINE
34326225	34326263	+	7.7	6086	6124	-42	L1PA17	L1	LINE
34326263	34326301	+	7.7	6086	6124	-42	L1PA17	L1	LINE
34326329	34326377	+	18.4	6076	6124	-42	L1PA17	L1	LINE
34326407	34326483	+	16.9	6076	6152	-14	L1PA17	L1	LINE
34326613	34326765	-	32.2	768	923	-549	MLT1H-int	MaLR	LTR

chr19:63802699-63805611
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
63802699	63803145	-	21.6	1063	1506	-3430	MER72-int	ERV1	LTR
63803149	63803216	+	22.1	3	72	-482	MLT2B3	ERVL	LTR
63803242	63803309	+	16.2	3	72	-482	MLT2B3	ERVL	LTR
63803335	63803402	+	17.6	3	72	-482	MLT2B3	ERVL	LTR
63803428	63803495	+	22.1	3	72	-482	MLT2B3	ERVL	LTR
63803521	63803588	+	20.6	3	72	-482	MLT2B3	ERVL	LTR
63803614	63803681	+	20.6	3	72	-482	MLT2B3	ERVL	LTR
63803707	63803774	+	17.6	3	72	-482	MLT2B3	ERVL	LTR
63803800	63803867	+	19.1	3	72	-482	MLT2B3	ERVL	LTR
63803893	63803960	+	22.1	3	72	-482	MLT2B5	ERVL	LTR
63803986	63804210	+	21.1	3	274	-388	MLT2B3	ERVL	LTR
63804211	63804572	+	14.2	1	375	0	THE1C	MaLR	LTR
63804573	63804922	+	24.0	159	597	-4	MLT2B5	ERVL	LTR
63804930	63805296	-	27.0	620	1063	-3873	MER72-int	ERV1	LTR
63805272	63805611	-	26.5	173	515	-4421	MER72-int	ERV1	LTR

chr20:2370303-2373113
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
2370303	2371100	+	22.8	4070	4952	-1194	L1M5	L1	LINE
2371105	2371403	+	11.0	1	304	-8	AluSx	Alu	SINE
2371423	2371701	+	22.6	1	258	-194	LTR47A	ERVL	LTR
2371704	2371762	+	19.6	200	258	-185	LTR47B	ERVL	LTR
2371765	2371823	+	19.6	200	258	-185	LTR47B	ERVL	LTR
2371826	2371884	+	19.6	200	258	-185	LTR47B	ERVL	LTR
2371887	2371945	+	27.1	200	258	-194	LTR47A	ERVL	LTR
2371948	2372006	+	19.6	200	258	-185	LTR47B	ERVL	LTR
2372009	2372067	+	19.6	200	258	-185	LTR47B	ERVL	LTR
2372070	2372128	+	19.6	200	258	-185	LTR47B	ERVL	LTR
2372131	2372189	+	19.6	200	258	-185	LTR47B	ERVL	LTR
2372216	2372250	+	17.1	224	258	-194	LTR47A	ERVL	LTR
2372253	2372311	+	19.6	200	258	-185	LTR47B	ERVL	LTR
2372314	2372372	+	19.6	200	258	-185	LTR47B	ERVL	LTR
2372375	2372433	+	19.6	200	258	-185	LTR47B	ERVL	LTR
2372436	2372494	+	19.6	200	258	-185	LTR47B	ERVL	LTR
2372505	2372740	+	20.5	210	443	0	LTR47B	ERVL	LTR
2372742	2372780	+	17.9	405	443	0	LTR47B	ERVL	LTR
2372781	2373113	+	24.3	4962	5298	-848	L1M5	L1	LINE

chr20:55192488-55194895
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
55192488	55192620	-	32.6	3286	3419	0	L2	L2	LINE
55192697	55192812	-	26.1	6	133	-276	MLT1I	MaLR	LTR
55192814	55193006	-	29.3	2938	3139	-280	L2	L2	LINE
55193062	55193427	+	24.0	22	478	-27	MLT1C	MaLR	LTR
55193503	55193682	-	30.3	2629	2809	-610	L2	L2	LINE
55193692	55193847	-	27.6	6204	6359	0	L1MD2	L1	LINE
55193856	55194089	-	30.6	2396	2621	-798	L2	L2	LINE
55194199	55194262	+	26.6	198	261	-7	MIRb	MIR	SINE
55194267	55194307	+	21.9	221	261	-7	MIRb	MIR	SINE
55194329	55194397	+	24.5	185	261	-6	MIRb	MIR	SINE
55194402	55194442	+	19.5	221	261	-7	MIRb	MIR	SINE
55194464	55194532	+	22.6	185	261	-6	MIRb	MIR	SINE
55194528	55194895	-	29.6	1999	2377	-1042	L2	L2	LINE

chr21:46935652-46938527
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
46935652	46936098	-	21.6	1063	1506	-3430	MER34B-int	ERV1	LTR
46936102	46936169	+	22.1	3	72	-482	MLT2B3	ERVL	LTR
46936195	46936262	+	14.7	3	72	-482	MLT2B3	ERVL	LTR
46936288	46936355	+	16.2	3	72	-482	MLT2B3	ERVL	LTR
46936381	46936448	+	22.1	3	72	-482	MLT2B3	ERVL	LTR
46936474	46936541	+	19.1	3	72	-482	MLT2B3	ERVL	LTR
46936567	46936632	+	16.7	3	72	-482	MLT2B3	ERVL	LTR
46936658	46936725	+	14.7	3	72	-482	MLT2B5	ERVL	LTR
46936751	46936977	+	19.9	3	279	-388	MLT2B3	ERVL	LTR
46936978	46937339	+	14.4	1	375	0	THE1C	MaLR	LTR
46937340	46937689	+	21.8	164	597	-4	MLT2B5	ERVL	LTR
46937697	46938061	-	27.3	620	1063	-3873	MER34B-int	ERV1	LTR
46938037	46938374	-	26.9	173	515	-4421	MER34B-int	ERV1	LTR
46938416	46938527	-	19.2	500	623	-4733	MER34B-int	ERV1	LTR

chrX:1770724-1778476
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
1770724	1770900	-	16.9	6101	6283	-8	L1MA8	L1	LINE
1770905	1771205	+	12.0	1	301	-11	AluSx	Alu	SINE
1771206	1771448	+	6.2	5900	6154	0	L1PA7	L1	LINE
1771487	1771722	-	12.3	1	236	-77	AluSq	Alu	SINE
1771727	1772028	-	7.3	1	302	-9	AluY	Alu	SINE
1772057	1772186	+	17.6	12	137	-6	FLAM_C	Alu	SINE
1772288	1772591	-	5.6	1	303	-8	AluY	Alu	SINE
1772593	1772762	-	21.2	130	299	-13	AluJb	Alu	SINE
1772887	1772943	-	27.8	6098	6178	-5	L1MB3	L1	LINE
1772944	1773078	+	10.7	1	135	-177	AluSx	Alu	SINE
1773079	1773392	+	14.5	1	312	0	AluSx	Alu	SINE
1773393	1773558	+	10.7	136	298	-14	AluSx	Alu	SINE
1773560	1773593	-	22.5	6061	6094	-80	L1MB5	L1	LINE
1773594	1773879	-	29.9	5767	6057	-1938	L1MD3	L1	LINE
1773925	1774226	-	12.9	1	303	-9	AluSx	Alu	SINE
1774242	1774425	-	16.3	6098	6286	-5	L1MA8	L1	LINE
1774426	1774714	+	12.2	1	286	-26	AluSx	Alu	SINE
1774736	1774811	-	16.3	6030	6097	-194	L1MA8	L1	LINE
1774812	1775112	-	10.0	1	301	-10	AluY	Alu	SINE
1775113	1775221	-	16.3	5921	6029	-262	L1MA8	L1	LINE
1775222	1775457	-	26.8	5703	5938	-228	L1PA16	L1	LINE
1775458	1775577	-	21.2	5648	5829	-355	L1MB7	L1	LINE
1775585	1775706	-	20.0	5707	5828	-346	L1MB5	L1	LINE
1775711	1775831	-	25.0	5711	5831	-469	L1MA5	L1	LINE
1775821	1775966	-	20.5	5702	5847	-309	L1MB5	L1	LINE
1775966	1776090	-	20.2	5707	5831	-353	L1MB7	L1	LINE
1776086	1776207	-	25.8	5707	5837	-463	L1MA5	L1	LINE
1776212	1776332	-	25.0	5711	5831	-469	L1MA5	L1	LINE
1776320	1776467	-	21.8	5699	5846	-445	L1MB5	L1	LINE
1776467	1776587	-	24.2	5711	5831	-469	L1MA5	L1	LINE
1776577	1776722	-	20.5	5702	5847	-309	L1MB5	L1	LINE
1776722	1776846	-	19.4	5707	5831	-353	L1MB7	L1	LINE
1776842	1776963	-	25.8	5707	5837	-463	L1MA5	L1	LINE
1776968	1777088	-	25.0	5711	5831	-469	L1MA5	L1	LINE
1777076	1777223	-	20.9	5699	5846	-445	L1MB5	L1	LINE
1777223	1777343	-	24.2	5711	5831	-469	L1MA5	L1	LINE
1777333	1777478	-	20.5	5702	5847	-309	L1MB5	L1	LINE
1777478	1777602	-	20.2	5707	5831	-353	L1MB7	L1	LINE
1777598	1777719	-	25.8	5707	5837	-463	L1MA5	L1	LINE
1777724	1777844	-	25.0	5711	5831	-469	L1MA5	L1	LINE
1777832	1777974	-	20.8	5707	5846	-454	L1MB5	L1	LINE
1777979	1778099	-	25.0	5711	5831	-343	L1MB5	L1	LINE
1778089	1778224	-	24.6	5711	5844	-461	L1MB5	L1	LINE
1778212	1778351	-	25.9	5711	5846	-454	L1MA4	L1	LINE
1778339	1778476	-	26.7	5707	5846	-445	L1MA8	L1	LINE

chrX:1902319-1906638
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
1902319	1902488	+	21.3	1	161	-306	MLT1C	MaLR	LTR
1902489	1902669	-	24.3	179	365	0	MLT1A0	MaLR	LTR
1902707	1902766	-	15.0	32	92	-334	MLT1A0	MaLR	LTR
1902765	1902823	-	16.9	32	92	-334	MSTB	MaLR	LTR
1902817	1902880	-	14.5	32	95	-331	MSTB	MaLR	LTR
1902881	1902937	-	10.5	32	89	-337	MSTB	MaLR	LTR
1902940	1902995	-	19.6	32	88	-338	MSTB	MaLR	LTR
1902994	1903053	-	18.3	32	92	-334	MSTB	MaLR	LTR
1903047	1903105	-	14.0	37	95	-331	MSTB	MaLR	LTR
1903109	1903167	-	11.9	32	92	-334	MSTB	MaLR	LTR
1903166	1903224	-	16.9	33	92	-340	MSTB1	MaLR	LTR
1903228	1903283	-	14.3	32	88	-338	MSTB	MaLR	LTR
1903282	1903340	-	16.9	33	92	-340	MSTB1	MaLR	LTR
1903340	1903399	-	15.0	32	92	-334	MSTB	MaLR	LTR
1903398	1903456	-	20.3	33	92	-340	MSTB1	MaLR	LTR
1903456	1903515	-	16.7	32	92	-334	MSTB	MaLR	LTR
1903514	1903571	-	17.2	34	92	-340	MSTB1	MaLR	LTR
1903567	1903631	-	12.9	31	95	-331	MSTB	MaLR	LTR
1903624	1903688	-	15.9	32	95	-331	MSTB	MaLR	LTR
1903687	1903746	-	15.0	32	92	-334	MSTB	MaLR	LTR
1903745	1903804	-	18.3	32	92	-334	MSTB	MaLR	LTR
1903861	1903920	-	16.7	32	92	-340	MSTB1	MaLR	LTR
1903924	1903975	-	15.4	35	87	-339	MSTB	MaLR	LTR
1903969	1904035	-	21.5	33	98	-334	MSTB1	MaLR	LTR
1904035	1904094	-	21.7	32	92	-334	MSTB	MaLR	LTR
1904093	1904152	-	13.3	32	92	-334	MSTB	MaLR	LTR
1904151	1904210	-	11.7	32	92	-334	MSTB	MaLR	LTR
1904213	1904268	-	17.9	32	88	-338	MSTB	MaLR	LTR
1904267	1904326	-	20.0	32	92	-334	MSTB	MaLR	LTR
1904325	1904383	-	18.6	33	92	-340	MSTB1	MaLR	LTR
1904383	1904442	-	16.7	32	92	-334	MSTB	MaLR	LTR
1904441	1904500	-	18.3	32	92	-334	MSTB	MaLR	LTR
1904499	1904558	-	15.0	32	92	-334	MSTB	MaLR	LTR
1904557	1904616	-	20.0	32	92	-334	MSTB	MaLR	LTR
1904615	1904674	-	13.3	32	92	-340	MSTB1	MaLR	LTR
1904668	1904732	-	17.5	32	95	-337	MSTB1	MaLR	LTR
1904726	1904790	-	11.3	32	95	-331	MSTB	MaLR	LTR
1904789	1904848	-	16.7	32	92	-334	MSTB	MaLR	LTR
1904847	1904906	-	15.0	32	92	-334	MSTB	MaLR	LTR
1904905	1904962	-	17.2	34	92	-334	MSTB	MaLR	LTR
1904958	1905022	-	19.1	32	95	-331	MSTB	MaLR	LTR
1905021	1905080	-	18.3	32	92	-334	MSTB	MaLR	LTR
1905083	1905138	-	14.3	32	88	-338	MSTB	MaLR	LTR
1905137	1905196	-	16.7	32	92	-334	MSTB	MaLR	LTR
1905195	1905254	-	18.3	32	92	-334	MSTB	MaLR	LTR
1905253	1905312	-	13.3	32	92	-334	MSTB	MaLR	LTR
1905311	1905371	-	15.0	32	92	-334	MSTB	MaLR	LTR
1905370	1905424	-	16.4	33	92	-340	MSTB1	MaLR	LTR
1905424	1905483	-	16.7	32	92	-340	MSTB1	MaLR	LTR
1905477	1905541	-	15.9	32	95	-331	MSTB	MaLR	LTR
1905540	1905598	-	15.2	33	92	-340	MSTB1	MaLR	LTR
1905598	1905657	-	16.7	32	92	-334	MSTB	MaLR	LTR
1905656	1905715	-	20.0	32	92	-334	MSTB	MaLR	LTR
1905714	1905773	-	16.7	32	92	-334	MSTB	MaLR	LTR
1905772	1905832	-	16.4	31	92	-334	MSTB	MaLR	LTR
1905830	1905893	-	16.4	32	92	-334	MSTB	MaLR	LTR
1905892	1905955	-	16.4	32	92	-334	MSTB	MaLR	LTR
1905954	1906012	-	16.9	32	92	-334	MSTB	MaLR	LTR
1906016	1906072	-	17.5	30	87	-339	MSTB	MaLR	LTR
1906069	1906129	-	17.2	34	92	-340	MSTB1	MaLR	LTR
1906125	1906186	-	11.7	34	95	-331	MSTB	MaLR	LTR
1906240	1906335	-	13.8	1	95	-331	MSTB	MaLR	LTR
1906373	1906638	+	25.7	157	465	-2	MLT1C	MaLR	LTR

chrX:1957407-1958538
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
1957407	1957484	+	7.7	6073	6151	-153	L1MA2	L1	LINE
1957485	1957526	-	4.8	314	355	0	THE1B	MaLR	LTR
1957527	1957836	+	10.3	1	310	-2	AluSx	Alu	SINE
1957837	1958188	-	14.3	16	334	-41	THE1B	MaLR	LTR
1958189	1958245	-	10.5	16	72	-292	THE1B	MaLR	LTR
1958245	1958302	-	10.3	16	73	-291	THE1B	MaLR	LTR
1958302	1958358	-	10.5	17	73	-291	THE1B	MaLR	LTR
1958359	1958431	-	12.3	1	73	-291	THE1B	MaLR	LTR
1958432	1958538	+	9.3	6147	6253	-51	L1MA2	L1	LINE

chrX:82837600-82852732
Genome Start	Genome End	Strand	Div	Repeat Start	Repeat End	Repeat Left	Name	Family	Class
82837600	82838654	-	20.4	3197	4481	-2364	L1M2	L1	LINE
82838698	82839189	-	21.8	2691	3196	-3649	L1M2	L1	LINE
82839301	82839586	-	13.4	5851	6149	-2	L1PB1	L1	LINE
82839622	82839651	-	10.0	5851	5880	-276	L1PB1	L1	LINE
82839636	82839683	-	8.3	5851	5902	-249	L1PB1	L1	LINE
82839668	82839715	-	8.3	5851	5902	-249	L1PB1	L1	LINE
82839700	82839747	-	8.3	5851	5902	-249	L1PB1	L1	LINE
82839732	82839779	-	8.3	5851	5902	-249	L1PB1	L1	LINE
82839764	82839811	-	8.3	5851	5902	-249	L1PB1	L1	LINE
82839796	82839936	-	12.9	5783	5902	-249	L1PB1	L1	LINE
82840027	82841089	-	11.8	4706	5782	-369	L1PB1	L1	LINE
82841221	82841409	-	27.5	1672	1937	-4445	L1M4c	L1	LINE
82841398	82843795	-	16.5	3790	6164	-1	L1PA15	L1	LINE
82843796	82844050	-	9.8	1	301	-10	AluY	Alu	SINE
82844051	82844637	-	17.2	3359	3993	-2357	L1M2	L1	LINE
82844623	82844989	-	29.0	1685	2053	-4298	L1M2	L1	LINE
82844997	82846132	-	17.4	5740	6865	-5	L1PB3	L1	LINE
82846133	82846513	-	17.1	1	381	0	THE1D	MaLR	LTR
82846514	82850279	-	19.6	2013	5739	-1123	L1PB3	L1	LINE
82850298	82850740	-	33.6	142	595	-6268	L1PB3	L1	LINE
82850789	82851902	-	29.2	602	1709	-4572	L1M2	L1	LINE
82851878	82852732	-	30.8	3	759	-5537	L1M2	L1	LINE