KEGG Name #Nodes Environmental robustness NGR Condition-independent NGR (487) Condition-independent NGR (487+20000) Regulatory genes fraction Environmental complexity score Lifestyle Doubling time Oxygen Centrality Mean rank Modularity rho Conservation V. essentiality P. value Conservation V. essentiality rho Conncetivity V. essentiality P. value Conectivity V. essentiality rho Centrality V. essentiality P. value Centrality V. essentiality aae Aquifex aeolicus 226 0.0020534 0.65487 0.65487 0.64602 0.021583 2 Specialized Aerobic 5.7644 4.0265 0.61246 -0.00442266 0.947283245 0.219528505 0.000891953 -0.158001562 0.017451074 aau Arthrobacter aurescens 378 0.0041068 0.80159 0.78042 0.77249 Terrestrial Aerobic 3.7719 6.3862 0.60406 0.262633933 2.21E-07 0.357817988 7.36E-13 -0.32364418 1.15E-10 aav Acidovorax avenae 193 0.010267 0.81865 0.78238 0.66839 Multiple Aerobic 3.5885 5.0984 0.60003 0.144102111 0.045567969 0.203376771 0.00455746 -0.11159255 0.122333635 abo Alcanivorax borkumensis 304 0.0020534 0.72368 0.72368 0.69737 Aquatic Aerobic 3.802 5.8224 0.5677 0.129300419 0.024157513 0.231916644 2.96E-05 -0.164459461 0.003269057 abu Arcobacter butzleri 243 0.016427 0.72016 0.61317 0.49383 Multiple Aerobic 4.3678 4.4444 0.61211 0.293098643 3.35E-06 0.257768087 5.29E-06 -0.229344436 5.43E-05 ace Acidothermus cellulolyticus 253 0.0061602 0.73518 0.70751 0.65613 Aquatic Aerobic 4.5 5.3992 0.6355 0.201186761 0.001294559 0.200571064 0.001675309 -0.16060475 0.012177234 aci Acinetobacter sp. ADP1 380 0.026694 0.80263 0.76579 0.71842 Multiple 0.5 Aerobic 3.4406 6.8526 0.55539 0.326510676 6.87E-11 0.287641665 3.30E-06 -0.17833257 0.004436265 acr Acidiphilium cryptum JF-5 129 0.0020534 0.71318 0.71318 0.71318 Multiple Aerobic 7.5 4.0775 0.60997 0.311386032 0.000328188 0.173968939 0.000658944 -0.189109627 0.000209076 ajs Acidovorax sp. JS42 213 0.0020534 0.82629 0.82629 0.78404 Terrestrial Aerobic 3.8632 5.6526 0.60793 0.163854431 0.016688294 0.172533028 0.050557889 -0.259619399 0.002967076 ama Anaplasma marginale 117 0.0041068 0.50427 0.49573 0.49573 Host-associated Aerobic 5.0086 3.4701 0.69135 -0.108651408 0.24358119 0.223384127 6.52E-05 -0.224210161 6.12E-05 ana Anabaena sp. PCC7120 302 0.0041068 0.74503 0.72848 0.68543 5 Multiple Aerobic 4.0266 5.3311 0.61363 0.278902341 8.45E-07 0.202259889 0.000404775 -0.128970633 0.025003758 aph Anaplasma phagocytophilum 105 0.0020534 0.73333 0.73333 0.73333 Host-associated Aerobic 4.3942 3.7143 0.68447 0.146028159 0.137170257 -0.007921644 0.934843788 -0.040838242 0.673299308 atc Agrobacterium tumefaciens C58 (Cereon) 405 0.010267 0.84198 0.8321 0.8 0.059169 5 Multiple 3 Aerobic 3.2871 6.9333 0.55151 0.35152965 3.18E-13 0.244873378 2.40E-07 -0.233960815 8.28E-07 atu Agrobacterium tumefaciens C58 (UWash/Dupont) 406 0.010267 0.84236 0.83251 0.80049 0.060323 5 Multiple 3 Aerobic 3.2864 6.936 0.55452 0.351882335 2.81E-13 0.271591197 5.92E-05 -0.163149132 0.017169355 ava Anabaena variabilis 331 0.016427 0.81571 0.8006 0.74018 Multiple Aerobic 4.1545 5.7885 0.60989 0.289539261 8.18E-08 0.127090133 0.172104031 0.051521009 0.58117574 ayw Phytoplasma AYWB 20 0.036961 0.6 0.25 0.2 Host-associated Aerobic 2.9474 3.2 0.45459 0.150420616 0.526730744 0.217910345 0.000135005 -0.163080927 0.004492478 baf Borrelia afzelii 57 0.0020534 0.66667 0.66667 0.66667 Host-associated Aerobic 10.036 2.4912 0.64045 0.041857203 0.757207968 0.207055769 0.034063715 0.022385213 0.820685972 bay Bacillus amyloliquefaciens 308 0.024641 0.79545 0.76623 0.74026 Terrestrial Aerobic 3.4756 5.3571 0.61877 0.248795872 9.95E-06 0.314761761 4.33E-08 -0.232943662 6.20E-05 bba Bdellovibrio bacteriovorus 256 0.0020534 0.8125 0.8125 0.80078 Multiple 1.4 Aerobic 3.8667 5.5547 0.62478 0.127640655 0.041289595 0.145005003 0.056976743 -0.230211149 0.002311093 bbk Bartonella bacilliformis 135 0.0020534 0.74815 0.74815 0.74815 Host-associated Aerobic 5.1791 3.9407 0.65467 0.105317655 0.224104672 0.198263974 0.034464916 -0.188440415 0.044659699 bbr Bordetella bronchiseptica 384 0.034908 0.80469 0.78906 0.71615 0.087105 4 Host-associated Aerobic 3.0809 7.6927 0.54639 0.282705674 1.73E-08 0.161986702 0.001069879 -0.131801774 0.007910718 bbt Bradyrhizobium sp. BTAi1 486 0.01232 0.86214 0.85391 0.82922 Host-associated Aerobic 2.8227 7.7531 0.50982 0.330457898 7.58E-14 0.160773104 0.00115133 -0.130834047 0.008303834 bca Bacillus cereus ATCC 10987 393 0.41068 0.84733 0.75064 0.743 Terrestrial Aerobic 2.8418 7.1399 0.60365 0.239327531 1.59E-06 0.168758157 0.00206448 -0.1165648 0.034012828 bce Bacillus cereus ATCC 14579 409 0.024641 0.84841 0.78729 0.7555 0.05598 6 Terrestrial 0.3 Aerobic 3.1127 6.802 0.60813 0.176852544 0.000325585 -0.138536387 0.560242548 0.236886737 0.314615998 bcz Bacillus cereus ZK 424 0.080082 0.85613 0.82075 0.78302 Terrestrial Aerobic 2.7825 7.4104 0.58994 0.263070974 3.84E-08 0.194873713 9.11E-05 -0.197623631 7.21E-05 bhe Bartonella henselae 192 0.0041068 0.67188 0.67188 0.65625 Host-associated 3 Aerobic 4.3665 4.4583 0.55208 0.098311785 0.174895199 0.148308295 0.003997949 -0.113877189 0.027451441 bja Bradyrhizobium japonicum 443 0.020534 0.84424 0.7991 0.77652 0.063725 4 Host-associated 20 Aerobic 3.2172 7.553 0.56742 0.356241243 1.06E-14 0.167292826 0.088051974 -0.33127617 0.000556559 bme Brucella melitensis 396 0.020534 0.82576 0.78788 0.7702 0.043225 4 Host-associated 2 Aerobic 3.2354 7.1061 0.57042 0.369901325 2.76E-14 0.115697151 0.100222465 0.036395024 0.606191102 bms Brucella suis 359 0.0061602 0.81894 0.79666 0.7688 0.04017 4 Host-associated 2 Aerobic 3.4302 5.9666 0.60374 0.336849638 5.65E-11 0.344597859 0.008666127 -0.35890544 0.006113328 bpa Bordetella parapertussis 360 0.057495 0.78056 0.74167 0.68889 0.088411 1 Host-associated Aerobic 3.3036 6.95 0.56683 0.278945498 7.39E-08 0.111944085 0.02443921 -0.073679272 0.139312415 bpd Burkholderia pseudomallei 668 386 0.0020534 0.85233 0.85233 0.77979 Terrestrial Aerobic 2.8727 6.5026 0.54606 0.332001083 2.20E-11 0.195322984 0.000117051 -0.149265506 0.003368945 bpe Bordetella pertussis 348 0.0020534 0.78448 0.78448 0.75287 0.139542 1 Host-associated 6 Aerobic 3.3112 6.8851 0.56843 0.251938656 1.94E-06 0.197333565 9.91E-05 -0.150595323 0.003093191 bpl Burkholderia pseudomallei 1106a 420 0.0082136 0.85238 0.84762 0.79762 Terrestrial Aerobic 2.8687 6.8762 0.55935 0.320279174 1.79E-11 0.150286221 0.137600841 -0.303856066 0.002231391 bpm Burkholderia pseudomallei 1710b 494 0.030801 0.88664 0.85628 0.83198 Terrestrial Aerobic 2.8945 8.1498 0.55284 0.306894246 3.11E-12 0.190711492 0.000157331 -0.148271358 0.003418299 bps Burkholderia pseudomallei K96243 475 0.12936 0.86316 0.82737 0.8 Terrestrial 0.7 Aerobic 2.9599 7.5832 0.55578 0.306359414 8.85E-12 0.21303443 0.000165309 -0.105240087 0.065099882 bpu Bacillus pumilus 369 0.016427 0.80759 0.75068 0.69106 Terrestrial Aerobic 3.4185 6.1301 0.58985 0.219050344 2.18E-05 0.228653106 0.000224657 -0.163935673 0.008590441 bqu Bartonella quintana 172 0.0020534 0.68023 0.68023 0.68023 Host-associated 3 Aerobic 5.2222 4.0814 0.63644 0.079090624 0.302392307 0.206012637 0.016522481 0.047514298 0.58421259 bte Burkholderia thailandensis 486 0.080082 0.89095 0.86626 0.83333 Terrestrial Aerobic 2.9505 7.4156 0.58072 0.312057166 1.95E-12 0.167676532 0.000972216 -0.150908431 0.00303132 btr Bartonella tribocorum 79 0.0020534 0.60759 0.60759 0.60759 Host-associated Aerobic 3.3205 3.7975 0.4976 0.250112503 0.026210666 0.225096928 5.33E-07 -0.218645939 1.13E-06 bxe Burkholderia xenovorans 519 0.036961 0.87091 0.84586 0.8131 Multiple Aerobic 2.9903 8.2736 0.54829 0.305774326 1.08E-12 0.062332979 0.71798705 -0.150965145 0.379468347 ccr Caulobacter crescentus 351 0.0020534 0.75783 0.75783 0.75783 0.055124 3 Aquatic 1.5 Aerobic 3.8486 6.0855 0.6012 0.282430723 7.35E-08 0.226666792 5.67E-06 -0.177999522 0.000391394 cdi Corynebacterium diphtheriae 270 0.0020534 0.70741 0.70741 0.70741 0.038732 Multiple Aerobic 5.7584 4.6963 0.63239 0.138657745 0.022677333 0.194357581 7.61E-05 -0.203382242 3.41E-05 chu Cytophaga hutchinsonii 310 0.0020534 0.79032 0.79032 0.77742 0.027436 Multiple Aerobic 4.0194 5.0452 0.58889 0.182018344 0.001287522 0.180084573 0.00017391 -0.163469719 0.000666917 cmi Clavibacter michiganensis 229 0.0020534 0.73799 0.73799 0.73799 Multiple Aerobic 3.7061 5.0131 0.62624 0.298726398 4.20E-06 0.076139698 0.359354673 -0.143000726 0.084009328 dge Deinococcus geothermalis 326 0.0020534 0.83742 0.83742 0.79141 Aquatic Aerobic 3.5477 6.4785 0.60516 0.341305278 2.45E-10 0.277643379 1.50E-08 -0.224648353 5.40E-06 dra Deinococcus radiodurans 321 0.020534 0.77259 0.76636 0.74143 0.029669 6 Terrestrial Aerobic 3.6875 5.757 0.62653 0.257389662 2.98E-06 0.165711242 0.000660516 -0.158565753 0.001127192 dsh Dinoroseobacter shibae 149 0.0020534 0.74497 0.74497 0.74497 unknown Aerobic 5.1486 4.9396 0.62931 0.25775198 0.001505786 0.183501949 0.000144874 -0.184174194 0.000136815 eli Erythrobacter litoralis 258 0.01848 0.72481 0.66667 0.64729 Aquatic Aerobic 3.7276 5.7209 0.58383 0.198756801 0.001331598 0.1942866 0.013235486 -0.143397227 0.068692719 fps Flavobacterium psychrophilum 230 0.0020534 0.71739 0.71739 0.66957 Aquatic Aerobic 3.7249 4.9913 0.65525 0.220338074 0.000765896 0.280571416 1.92E-06 -0.163661461 0.006145592 fra Frankia sp. CcI3 324 0.024641 0.78395 0.72531 0.71605 Multiple Aerobic 3.9443 6.0926 0.6117 0.234026206 2.09E-05 0.268099731 5.59E-06 -0.136841641 0.022242023 fta Francisella tularensis subsp. holarctica FTA 185 0.0020534 0.73514 0.73514 0.73514 Multiple Aerobic 5.8641 4.6054 0.67342 0.201402289 0.00597724 0.2361891 0.082555342 -0.219320676 0.107655326 ftf Francisella tularensis subsp. tularensis FSC 198 256 0.0041068 0.81641 0.81641 0.81641 Aquatic Aerobic 3.9922 5.2813 0.61761 0.193468132 0.0018723 0.270347066 6.85E-08 -0.215238582 2.00E-05 fth Francisella tularensis subsp. holarctica OSU18 256 0.0041068 0.78906 0.78906 0.78125 Multiple Aerobic 4.0471 5.1172 0.58967 0.147899346 0.01789201 0.136885037 0.058321882 -0.029049369 0.689174311 ftl Francisella tularensis subsp. holarctica LVS 239 0.0041068 0.79916 0.79916 0.79079 Host-associated Aerobic 3.9664 5.2218 0.61227 0.189906117 0.003205068 0.194577977 3.73E-05 -0.158597332 0.00080846 ftn Francisella tularensis subsp. novicida U112 255 0.0020534 0.79216 0.79216 0.74902 Multiple Aerobic 3.6063 5.1765 0.6173 0.139501187 0.025906257 0.238635932 1.19E-06 -0.144114134 0.003655396 ftu Francisella tularensis subsp. tularensis SCHU S4 253 0.0041068 0.81818 0.81818 0.81818 Aquatic Aerobic 4.0159 5.17 0.62175 0.174627418 0.005347859 0.291229914 3.68E-09 -0.188170442 0.000168818 ftw Francisella tularensis subsp. tularensis WY96-3418 261 0.010267 0.8046 0.77011 0.70115 Host-associated Aerobic 3.7346 5.272 0.63579 0.254211337 3.24E-05 0.19793552 0.00268131 -0.13656453 0.039359532 gfo Gramella forsetii 280 0.01232 0.84286 0.79286 0.76429 Multiple Aerobic 3.0287 5.9357 0.58994 0.26618019 6.31E-06 0.128671778 0.007342462 -0.129254379 0.007078244 gka Geobacillus kaustophilus 397 0.069815 0.79345 0.75567 0.72796 Aquatic Aerobic 3.6717 6.7103 0.56946 0.245720076 7.17E-07 0.125413922 0.017280105 -0.128325801 0.014833264 gox Gluconobacter oxydans 296 0.0020534 0.78378 0.78378 0.73649 Multiple 1 Aerobic 3.5932 5.2838 0.61348 0.257544778 7.18E-06 0.157256559 0.001695102 -0.173144016 0.000538564 hhe Helicobacter hepaticus 231 0.0041068 0.71429 0.67965 0.54545 0.0128 4 Host-associated 4.2 Aerobic 4.3652 4.5195 0.66267 0.227038666 0.000506127 0.162980145 0.001892007 -0.19885287 0.000142868 hne Hyphomonas neptunium 304 0.0020534 0.74013 0.74013 0.74013 Aquatic Aerobic 3.4884 6.1974 0.5717 0.250901579 9.53E-06 0.108552733 0.046782034 -0.021231021 0.698190343 hpa Helicobacter pylori HPAG1 218 0.0061602 0.61009 0.58257 0.57339 Host-associated Aerobic 5.3502 4.4128 0.6849 0.233408152 0.000511743 0.122560289 0.00638304 -0.110702291 0.01382344 hpj Helicobacter pylori J99 163 0.0041068 0.57055 0.57055 0.57055 0.008719 4 Host-associated Aerobic 5.9383 3.5951 0.6837 0.021759176 0.782780593 0.091206814 0.084402459 -0.060821463 0.250371442 hpy Helicobacter pylori 26695 144 0.0020534 0.52778 0.52778 0.52778 0.007614 4 Host-associated 2.4 Aerobic 7.6713 3.375 0.67912 0.032461836 0.699312384 0.176381181 0.029728145 -0.08882284 0.276509432 ilo Idiomarina loihiensis 295 0.0020534 0.79322 0.79322 0.7661 Specialized Aerobic 3.585 5.9186 0.57877 0.242725133 2.50E-05 0.114462602 0.029903715 -0.041439283 0.433123763 jan Jannaschia sp. CCS1 357 0.0041068 0.80952 0.78992 0.7591 Aquatic Aerobic 3.3876 7.2941 0.63785 0.247078425 2.30E-06 0.142541803 0.030693631 -0.075393285 0.254791748 lbj Leptospira borgpetersenii JB197 219 0.0041068 0.71233 0.71233 0.60274 Host-associated Aerobic 5.6743 4.3927 0.61399 -0.009372218 0.890315137 0.134047319 0.010895765 -0.09504259 0.071684918 lbl Leptospira borgpetersenii L550 218 0.0020534 0.70183 0.70183 0.6055 Host-associated Aerobic 5.5346 4.367 0.6311 -0.035853622 0.598542049 0.116053665 0.022583475 -0.067304272 0.18699291 lic Leptospira interrogans serovar Copenhageni 232 0.0020534 0.6681 0.6681 0.60345 Host-associated Aerobic 5.1602 4.6379 0.58199 0.109413046 0.096407901 0.173271793 0.001173291 -0.155030649 0.003741137 lil Leptospira interrogans serovar lai 258 0.0020534 0.7093 0.7093 0.70543 0.013073 4 Host-associated 9 Aerobic 4.8093 4.9535 0.56363 0.077534621 0.21452731 0.055495623 0.256456191 -0.017926319 0.71413022 lpf Legionella pneumophila Lens 296 0.0061602 0.78716 0.77703 0.77703 Host-associated Aerobic 3.3051 6.277 0.53836 0.256999767 7.52E-06 0.090690579 0.043931286 -0.064466192 0.152518676 lpn Legionella pneumophila Philadelphia 1 300 0.0061602 0.79333 0.79333 0.79333 0.027211 Host-associated 3.3 Aerobic 3.3545 6.2933 0.55235 0.247153624 1.49E-05 0.187421724 0.014389969 -0.17777859 0.020375825 lpp Legionella pneumophila Paris 300 0.0061602 0.79333 0.79333 0.79333 Host-associated Aerobic 3.2876 6.4867 0.54068 0.247533888 1.44E-05 0.098402307 0.032018135 -0.057806794 0.208535647 lxx Leifsonia xyli xyli CTCB07 254 0.0061602 0.70866 0.69291 0.61811 Host-associated 5 Aerobic 4.6285 4.7008 0.61772 0.193960724 0.001899429 0.167721998 0.001319494 -0.109493402 0.036789018 mav Mycobacterium avium 104 385 0.0020534 0.7974 0.7974 0.7974 Host-associated Aerobic 3.638 7.0026 0.56418 0.302533417 1.37E-09 0.184529576 0.000366196 -0.104615095 0.044612922 mbb Mycobacterium bovis BCG Pasteur 1173P2 294 0.0020534 0.81293 0.81293 0.81293 Host-associated Aerobic 4.1058 6.0816 0.57568 0.222962213 0.000115559 0.102961638 0.17892972 0.069423173 0.365502627 mbo Mycobacterium bovis AF2122/97 364 0.0082136 0.77747 0.77473 0.72802 0.045153 4 Host-associated Aerobic 3.8595 6.7308 0.57245 0.207879425 6.44E-05 0.207957146 7.38E-06 -0.198563719 1.90E-05 mca Methylococcus capsulatus 307 0.0041068 0.77199 0.74593 0.72964 Multiple Aerobic 3.6601 5.1922 0.59195 0.252931486 7.23E-06 0.191477291 0.000123685 -0.088902468 0.076845749 mes Mesorhizobium sp. BNC1 350 0.020534 0.83143 0.78857 0.76286 Multiple Aerobic 3.4126 6.5143 0.58878 0.315040904 1.67E-09 0.104291802 0.021476073 -0.043034884 0.34378291 mfa Methylobacillus flagellatus 266 0.0020534 0.70301 0.70301 0.61654 Specialized Aerobic 4.0792 4.7895 0.62702 0.145668614 0.017440434 0.306568135 1.16E-07 -0.191686413 0.001100387 mle Mycobacterium leprae 257 0.0020534 0.67315 0.67315 0.6537 0.024299 1 Host-associated 240 Aerobic 4.9492 4.8872 0.63732 0.22995207 0.000200494 0.204335951 3.35E-05 -0.2269073 3.87E-06 mlo Mesorhizobium loti 444 0.078029 0.86486 0.81982 0.80405 0.075304 5 Multiple Aerobic 2.9819 7.464 0.58258 0.302814258 7.21E-11 0.171644925 0.000513334 -0.124419048 0.012107314 mmw Marinomonas sp. MWYL1 152 0.0020534 0.82895 0.82895 0.78947 Aquatic Aerobic 4.3576 5.1316 0.6255 0.165648342 0.041399822 0.191397018 0.091081812 -0.149511804 0.188471538 mpa Mycobacterium avium paratuberculosis 358 0.073922 0.75698 0.71788 0.69832 Multiple 10 Aerobic 3.2129 6.8715 0.59671 0.289921046 2.31E-08 0.100711514 0.252391023 -0.158521655 0.070540082 mra Mycobacterium tuberculosis H37Ra 331 0.0020534 0.76737 0.76737 0.76133 Host-associated Aerobic 4.0152 6.3142 0.58172 0.195171585 0.00035452 0.137454126 0.001768381 -0.141360723 0.001298299 msm Mycobacterium smegmatis 415 0.0020534 0.84578 0.84578 0.78554 Host-associated Aerobic 3.3937 7.4506 0.53551 0.243742498 5.00E-07 0.173528283 0.002278988 -0.12600204 0.027276819 mtc Mycobacterium tuberculosis CDC1551 353 0.0082136 0.74788 0.74504 0.70255 0.04108 4 Host-associated Aerobic 3.7983 6.5099 0.58333 0.231030136 1.16E-05 0.157739425 0.000309166 -0.145989352 0.000850739 mtf Mycobacterium tuberculosis F11 179 0.0020534 0.72067 0.72067 0.63128 Host-associated Aerobic 6.7753 4.6034 0.68972 0.20977149 0.004827629 0.322119447 0.000805154 -0.356597692 0.000188591 mtu Mycobacterium tuberculosis H37Rv 361 0.0082136 0.76454 0.76177 0.71468 0.044054 4 Host-associated 24 Aerobic 3.8694 6.687 0.57282 0.210140562 5.73E-05 0.239031766 3.15E-05 -0.1737421 0.002660408 mul Mycobacterium ulcerans 342 0.0020534 0.76608 0.76608 0.74854 Host-associated Aerobic 3.8065 6.0175 0.56409 0.249877745 2.89E-06 -0.008880116 0.933420976 -0.065363535 0.53817993 mva Mycobacterium vanbaalenii 330 0.0020534 0.81212 0.81212 0.77879 unknown Aerobic 3.9848 6.8061 0.54335 0.240483127 1.00E-05 0.121867159 0.167207208 -0.07457063 0.399117108 mxa Myxococcus xanthus 308 0.0020534 0.8474 0.8474 0.76948 Terrestrial Aerobic 4.3909 5.513 0.63651 0.157910217 0.005478022 0.1538259 0.034573234 -0.028119665 0.700909604 nar Novosphingobium aromaticivorans 301 0.020534 0.77409 0.75083 0.72757 0.051675 Multiple Aerobic 3.5867 6.0332 0.58539 0.248449293 1.29E-05 0.189529919 0.004159406 -0.072776121 0.274886697 nca Nocardioides sp. JS614 306 0.0082136 0.79085 0.78105 0.73856 Terrestrial Aerobic 3.6361 6.1242 0.61847 0.175685084 0.002037692 0.132271373 0.055649473 -0.112736967 0.103279041 neu Nitrosomonas europaea 306 0.0082136 0.75163 0.71242 0.70261 0.038196 5 Multiple 18.5 Aerobic 4.0492 5.3922 0.5775 0.229627092 5.02E-05 0.349579999 0.000169414 -0.384011804 3.17E-05 nfa Nocardia farcinica 352 0.036961 0.74432 0.71023 0.68466 Multiple 3 Aerobic 3.7436 6.4545 0.58682 0.297884608 1.21E-08 0.298751551 2.12E-06 -0.256406794 5.25E-05 ngo Neisseria gonorrhoeae 269 0.0041068 0.7026 0.69145 0.61338 Host-associated 1.1 Aerobic 4.1343 5.1301 0.62175 0.178641383 0.00328236 0.14846972 0.056257169 -0.17483718 0.024260406 nha Nitrobacter hamburgensis 317 0.0020534 0.76656 0.76656 0.74132 Terrestrial Aerobic 3.3639 6.5741 0.55727 0.239019479 1.70E-05 0.148156101 0.00541639 -0.188865778 0.000373904 nma Neisseria meningitidis Z2491 (serogroup A) 292 0.0041068 0.75342 0.75342 0.65411 0.024697 4 Host-associated 1 Aerobic 3.8763 5.0479 0.62455 0.240657858 3.24E-05 0.256206239 0.000109169 -0.217590606 0.001074213 nmc Neisseria meningitidis FAM18 255 0.0020534 0.6902 0.6902 0.6902 Host-associated Aerobic 3.689 5.0353 0.64426 0.271262934 1.12E-05 0.133087786 0.038967587 -0.026106948 0.686764012 nme Neisseria meningitidis MC58 (serogroup B) 285 0.0041068 0.75439 0.75439 0.64912 0.027417 4 Host-associated Aerobic 3.8838 4.9965 0.62913 0.221495113 0.000163402 0.273757775 5.00E-06 -0.262324076 1.26E-05 nmu Nitrosospira multiformis 292 0.028747 0.71575 0.68151 0.64384 Terrestrial Aerobic 3.7251 5.1438 0.62067 0.223456245 0.00011771 0.251260466 7.53E-06 -0.265706397 2.09E-06 oih Oceanobacillus iheyensis 369 0.12115 0.77236 0.72358 0.71003 0.051714 5 Multiple Aerobic 3.625 6.3957 0.59835 0.242342078 2.48E-06 0.33233293 0.00026767 -0.350820815 0.000112926 pae Pseudomonas aeruginosa PAO1 442 0.14168 0.85973 0.81448 0.78959 0.080654 5 Multiple 0.5 Aerobic 3.1746 7.4796 0.54937 0.286747154 8.21E-10 0.22530506 0.00040063 -0.174292788 0.00645305 pat Pseudoalteromonas atlantica 384 0.020534 0.82031 0.79688 0.75 Aquatic Aerobic 3.5692 6.4896 0.58585 0.340176679 7.40E-12 0.283002341 1.02E-07 -0.29981793 1.56E-08 pau Pseudomonas aeruginosa UCBPP-PA14 406 0.028747 0.88177 0.84483 0.81034 Multiple Aerobic 3.0914 7.468 0.5409 0.201618381 4.28E-05 0.2958069 6.05E-08 -0.288880317 1.26E-07 pde Paracoccus denitrificans 387 0.010267 0.82946 0.8062 0.77778 Multiple Aerobic 3.1684 6.7287 0.60067 0.30836293 5.71E-10 0.166900318 0.011977763 -0.176332877 0.007883543 pfl Pseudomonas fluorescens Pf-5 461 0.1499 0.84816 0.81779 0.80043 0.073017 Multiple Aerobic 2.9761 7.4924 0.51527 0.297822852 6.76E-11 0.171562525 0.002437687 -0.122909051 0.030502414 pfo Pseudomonas fluorescens PfO-1 429 0.024641 0.83217 0.81818 0.78555 Multiple Aerobic 3.2173 7.1375 0.58303 0.277940607 4.75E-09 0.291438268 1.67E-06 -0.214980722 0.000469762 pha Pseudoalteromonas haloplanktis 390 0.045175 0.85128 0.81026 0.77692 Aquatic Aerobic 3.1414 7.4308 0.55336 0.345437175 2.27E-12 0.112540094 0.171781166 -0.165384721 0.043833587 pla Parvibaculum lavamentivorans 122 0.0020534 0.72951 0.72951 0.72951 Multiple Aerobic 6.0496 4.0656 0.66274 0.172648932 0.057217667 0.166413579 0.009960458 -0.190699779 0.003077374 pmy Pseudomonas mendocina 287 0.0020534 0.81185 0.81185 0.7561 Multiple Aerobic 3.3776 6.4739 0.57419 0.237866433 4.69E-05 0.048959293 0.480389558 -0.019200763 0.78207942 pna Polaromonas naphthalenivorans 210 0.0020534 0.8 0.8 0.61905 Aquatic Aerobic 4.1818 5.181 0.61604 0.176450628 0.010410623 0.308791941 1.27E-07 -0.288246134 8.88E-07 pnu Polynucleobacter sp. QLW-P1DMWA-1 164 0.0020534 0.71341 0.71341 0.71341 Aquatic Aerobic 5.0736 3.9512 0.65724 0.099699877 0.204019541 0.151419009 0.018183884 -0.1729806 0.006871607 pol Polaromonas sp. JS666 403 0.01848 0.80893 0.78908 0.75682 Multiple Aerobic 3.408 7.2705 0.54384 0.264373402 7.17E-08 0.146054221 0.032716908 -0.159296128 0.0197238 poy Phytoplasma OY 20 0.028747 0.45 0.3 0.2 Host-associated Aerobic 3.3684 3 0.41944 0.104836238 0.660031957 0.252751129 0.000126815 -0.148060067 0.026365513 ppf Pseudomonas putida F1 292 0.0020534 0.84932 0.84932 0.80822 Multiple Aerobic 3.9107 7.1781 0.52302 0.266151429 3.99E-06 0.269266408 3.64E-05 -0.275741804 2.31E-05 ppu Pseudomonas putida KT2440 426 0.024641 0.82394 0.80751 0.7723 0.074953 5 Multiple 1.1 Aerobic 3.1553 7.1268 0.57136 0.287857649 1.43E-09 0.330121971 0.000583446 -0.376862025 7.41E-05 prw Psychrobacter sp. PRwf-1 183 0.0020534 0.74317 0.74317 0.65027 Aquatic Aerobic 3.8352 5.235 0.64882 0.065705107 0.376854336 0.210042413 0.001819166 -0.136877403 0.043501385 psb Pseudomonas syringae pv. syringae B728a 408 0.022587 0.82353 0.79657 0.77206 Multiple Aerobic 2.9607 6.9314 0.54672 0.297159737 9.20E-10 0.320501322 0.000720499 -0.333291946 0.000423953 psp Pseudomonas syringae pv. phaseolicola 1448A 416 0.053388 0.8774 0.84856 0.80048 Multiple Aerobic 3.2554 7.1923 0.59039 0.265221831 3.98E-08 0.312811617 3.07E-07 -0.250847821 4.76E-05 pst Pseudomonas syringae pv. tomato DC3000 404 0.020534 0.83663 0.80941 0.75248 0.060135 5 Multiple 1.47 Aerobic 3.2804 6.6683 0.59259 0.335717517 4.24E-12 0.283511487 8.90E-06 -0.185972145 0.003988219 pub Candidatus Pelagibacter ubique 244 0.0020534 0.65984 0.65984 0.65984 Aquatic Aerobic 4.4403 4.5984 0.62424 0.13602075 0.0336968 0.293908873 1.96E-06 -0.309286593 5.20E-07 rba Rhodopirellula baltica 333 0.0020534 0.82282 0.82282 0.82282 1 Aquatic Aerobic 3.491 5.8919 0.59565 0.111682704 0.041677051 0.321873208 0.000642489 -0.331951317 0.000421476 ret Rhizobium etli 466 0.0061602 0.86266 0.86266 0.82403 Host-associated Aerobic 3.2538 7.721 0.56452 0.357717605 1.63E-15 0.321873208 0.000642489 -0.331951317 0.000421476 rha Rhodococcus sp. RHA1 497 0.080082 0.84306 0.82495 0.80282 Terrestrial Aerobic 3.2278 8.1006 0.53594 0.319856081 2.76E-13 0.362447688 2.51E-08 -0.341092809 1.77E-07 rle Rhizobium leguminosarum 503 0.0020534 0.84692 0.84692 0.83101 Host-associated Aerobic 3.3865 7.8489 0.54076 0.317438601 3.07E-13 0.24872884 8.52E-07 -0.245714513 1.17E-06 rrj Rickettsia rickettsii Iowa 81 0.0020534 0.53086 0.53086 0.53086 Host-associated Aerobic 6.6875 3.4815 0.62177 0.187286106 0.094086174 0.321873208 0.000642489 -0.331951317 0.000421476 rso Ralstonia solanacearum 437 0.01848 0.83524 0.83066 0.79863 0.059884 5 Multiple 4 Aerobic 2.9656 7.4874 0.55369 0.317256413 1.13E-11 0.258836291 1.06E-06 -0.262253997 7.52E-07 rxy Rubrobacter xylanophilus 262 0.0061602 0.75573 0.74046 0.73664 Specialized Aerobic 3.0077 5.9466 0.61985 0.316087007 1.73E-07 0.332400287 0.00044025 -0.370203453 8.03E-05 sal Sphingopyxis alaskensis 280 0.0020534 0.78214 0.78214 0.75 Aquatic Aerobic 4.3082 5.8786 0.55017 0.199152615 0.000804667 0.368259662 9.17E-09 -0.274378171 2.55E-05 scl Sorangium cellulosum 328 0.0041068 0.82927 0.80793 0.78049 Terrestrial Aerobic 3.0673 7.122 0.57776 0.266433762 9.80E-07 0.231028326 0.000449508 -0.218461296 0.000921713 sco Streptomyces coelicolor 384 0.028747 0.81771 0.79427 0.75 0.093062 5 Multiple 2.2 Aerobic 3.4021 6.9479 0.53634 0.265496165 1.29E-07 0.365085065 0.000149595 -0.41016385 1.69E-05 sde Saccharophagus degradans 276 0.0020534 0.78623 0.78623 0.78623 Aquatic Aerobic 5.0436 5.1014 0.63926 0.254243517 1.91E-05 0.23829434 8.80E-07 -0.21645371 8.41E-06 sen Saccharopolyspora erythraea 454 0.034908 0.84141 0.82819 0.78194 Terrestrial Aerobic 3.1766 7.2687 0.54065 0.301890613 5.08E-11 0.263004553 1.11E-05 -0.232038527 0.000112418 sil Silicibacter pomeroyi 399 0.1191 0.83459 0.79449 0.76441 Aquatic Aerobic 3.2638 7.614 0.56706 0.317944425 8.01E-11 0.261430384 8.66E-06 -0.215661817 0.000263757 sma Streptomyces avermitilis 362 0.0041068 0.82873 0.82873 0.77624 0.082244 5 Multiple Aerobic 3.4044 7.0884 0.57052 0.294804375 1.08E-08 0.194299136 0.000207952 -0.18600473 0.000388274 sme Sinorhizobium meliloti 438 0.039014 0.87443 0.84475 0.82648 0.065549 5 Multiple 1.5 Aerobic 3.2128 7.8311 0.56751 0.336886834 4.38E-13 0.330451584 2.37E-08 -0.235900402 8.56E-05 sru Salinibacter ruber 297 0.0061602 0.74411 0.73737 0.63636 Specialized Aerobic 3.5439 5.6296 0.57935 0.191581666 0.000904934 0.225535207 0.004382549 -0.129278292 0.105468601 ssp Staphylococcus saprophyticus 320 0.030801 0.76563 0.75 0.70313 Host-associated Aerobic 3.8715 6.1437 0.60437 0.231617905 2.86E-05 0.272536345 0.000601884 -0.178978822 0.025863483 swi Sphingomonas wittichii 209 0.0020534 0.78469 0.78469 0.78469 Aquatic Aerobic 4.8125 5.4928 0.6028 0.189567286 0.005976318 0.247991357 5.86E-06 -0.17535558 0.001479726 ter Trichodesmium erythraeum 265 0.0082136 0.74717 0.71698 0.65283 0.017374 Aquatic Aerobic 5.6932 4.8755 0.60256 0.218727523 0.000334083 0.198914017 0.020256977 0.021015473 0.808125413 tfu Thermobifida fusca 309 0.022587 0.73786 0.67961 0.6699 0.055763 Multiple Aerobic 3.8994 5.9029 0.58585 0.223441483 7.43E-05 0.209124363 0.000481549 -0.203847892 0.000671852 tth Thermus thermophilus HB27 316 0.0020534 0.6962 0.6962 0.6962 Specialized 2.5 Aerobic 3.981 5.9114 0.57742 0.180323967 0.00128533 0.254797478 3.77E-06 -0.162344735 0.003537888 ttj Thermus thermophilus HB8 310 0.016427 0.72903 0.71613 0.66774 Specialized Aerobic 3.6408 6.1032 0.57314 0.184929811 0.001071183 0.152269796 0.074601557 -0.098627454 0.249781607 xac Xanthomonas axonopodis 417 0.053388 0.79376 0.7506 0.72662 0.043406 4 Host-associated 7 Aerobic 3.3534 6.2302 0.5691 0.221646606 4.89E-06 0.228347906 0.005094897 -0.22518827 0.005759284 xcb Xanthomonas campestris pv. campestris 8004 418 0.026694 0.79665 0.7512 0.72727 0.044965 Host-associated Aerobic 3.3525 6.2727 0.57064 0.242663505 5.12E-07 0.366319436 8.64E-12 -0.280776731 2.55E-07 xcc Xanthomonas campestris pv. campestris ATCC 33913 418 0.053388 0.79187 0.74641 0.72488 4 Host-associated Aerobic 3.3573 6.2632 0.56807 0.228434601 2.37E-06 0.26537458 9.51E-06 -0.180675563 0.002834373 xcv Xanthomonas campestris pv. vesicatoria 412 0.0041068 0.79612 0.79612 0.74515 Host-associated 3 Aerobic 3.309 6.3447 0.57344 0.188259353 0.000121014 0.174336694 0.001291126 -0.117487427 0.030814315 xfa Xylella fastidiosa 9a5c 273 0.0020534 0.68498 0.68498 0.67399 0.024584 1 Host-associated 96 Aerobic 4.1618 4.5275 0.62992 0.177259783 0.003296131 0.256461761 1.83E-08 -0.210477889 4.38E-06 xft Xylella fastidiosa Temecula1 281 0.0041068 0.67972 0.67972 0.60854 0.026549 1 Host-associated Aerobic 4.2 4.5196 0.63904 0.167035279 0.004996034 0.267229232 1.09E-09 -0.225548561 3.10E-07 xom Xanthomonas oryzae MAFF311018 383 0.01848 0.79112 0.7624 0.71018 Host-associated Aerobic 3.1283 6.2089 0.57458 0.164215 0.001258989 0.269902193 4.10E-10 -0.23369224 7.21E-08 xoo Xanthomonas oryzae KACC10331 378 0.01232 0.78571 0.76455 0.70899 Host-associated 2 Aerobic 3.122 6.1799 0.58032 0.171407033 0.000818993 0.159090488 0.096897332 -0.070295526 0.465544862 afw Anaeromyxobacter sp. Fw109-5 109 0.0020534 0.83486 0.83486 0.74312 Terrestrial Anaerobic 4.4444 4.1651 0.64938 0.311374998 0.000981757 0.209708651 8.02E-07 -0.165831706 0.000101965 bad Bifidobacterium adolescentis 203 0.0020534 0.72414 0.72414 0.72414 Host-associated Anaerobic 6.2921 4.2365 0.70487 0.294356629 2.02E-05 0.265859299 1.24E-09 -0.241130713 3.98E-08 bfr Bacteroides fragilis YCH46 279 0.0041068 0.79211 0.78495 0.71685 unknown 0.63 Anaerobic 3.2266 6.1362 0.59358 0.244373666 3.69E-05 0.170171066 0.062029261 -0.037779272 0.680775386 bfs Bacteroides fragilis NCTC9343 279 0.0020534 0.82437 0.82437 0.74194 Host-associated Anaerobic 3.2122 6.2007 0.6107 0.272164022 3.97E-06 0.254564061 2.77E-09 -0.231102889 7.41E-08 blo Bifidobacterium longum 228 0.0020534 0.74123 0.74123 0.74123 0.050376 4 Host-associated Anaerobic 5.0793 4.6404 0.63471 0.229305405 0.000482978 0.217158348 7.95E-07 -0.18468421 2.86E-05 bpt Bordetella petrii 364 0.0041068 0.82143 0.81593 0.74725 Aquatic Anaerobic 2.832 7.1538 0.54675 0.297618706 7.02E-09 0.269673991 4.95E-10 -0.234709249 7.09E-08 bth Bacteroides thetaiotaomicron 287 0.0082136 0.77352 0.74564 0.68293 0.049184 4 Host-associated 1.47 Anaerobic 3.2413 5.9024 0.58567 0.249149374 1.96E-05 0.209253517 7.25E-06 -0.169329866 0.000298982 cac Clostridium acetobutylicum 297 0.0082136 0.73064 0.70707 0.6431 0.057462 5 Multiple 0.58 Anaerobic 3.8649 5.4007 0.60636 0.249377394 1.37E-05 0.248076506 2.81E-08 -0.198285161 1.02E-05 cau Chloroflexus aurantiacus 91 0.0020534 0.79121 0.79121 0.79121 0.028536 Specialized Anaerobic 4.6667 3.6923 0.65894 0.261962553 0.012128356 0.225130248 6.07E-07 -0.197910221 1.23E-05 cbf Clostridium botulinum F 189 0.0020534 0.84656 0.84656 0.84656 Multiple Anaerobic 3.6968 5.2381 0.61604 0.246613074 0.000624217 0.376355739 1.07E-09 -0.21974625 0.000517443 cbo Clostridium botulinum A 227 0.0061602 0.85022 0.84581 0.84581 Multiple Anaerobic 3.1858 6.2555 0.57294 0.263349266 5.89E-05 0.214651387 0.000517322 -0.242565634 8.28E-05 cch Chlorobium chlorochromatii 243 0.0041068 0.62963 0.62963 0.58848 Aquatic Anaerobic 4.4711 4.3704 0.61626 0.089528799 0.16416024 -0.022113051 0.738700567 0.064077089 0.333305561 cdf Clostridium difficile 241 0.01232 0.87552 0.80913 0.75104 Multiple Anaerobic 2.8333 6.0996 0.6131 0.264826984 3.12E-05 0.219902289 0.018205589 -0.087954771 0.349933118 cha Campylobacter hominis ATCC BAA-381 226 0.0020534 0.65487 0.65487 0.5354 Host-associated Anaerobic 4.3644 4.2655 0.59165 0.208934674 0.001585875 0.182823513 0.040458225 -0.02039244 0.820698377 chy Carboxydothermus hydrogenoformans 261 0.0020534 0.66284 0.66284 0.66284 Aquatic Anaerobic 4.4154 4.9655 0.63264 0.133389417 0.031219453 0.199881148 0.026030848 0.020957683 0.817286293 cno Clostridium novyi 218 0.0020534 0.75688 0.75688 0.75688 Terrestrial Anaerobic 4.1567 4.6697 0.6541 0.182249367 0.006974845 0.217835346 1.98E-05 -0.15788911 0.002106578 cpe Clostridium perfringens 13 257 0.0061602 0.82879 0.81712 0.81712 0.044361 5 Multiple 0.2 Anaerobic 4.2813 5.1284 0.65591 0.136729598 0.028411319 0.29036669 1.66E-05 -0.193679932 0.004554751 cpf Clostridium perfringens ATCC 13124 238 0.0061602 0.85714 0.84034 0.84034 Multiple Anaerobic 4.0422 5.3445 0.65103 0.247016436 0.000117848 0.20851181 0.001472571 -0.146310623 0.026502072 cpr Clostridium perfringens SM101 223 0.0020534 0.78924 0.78924 0.78924 Multiple Anaerobic 4.6036 4.9238 0.65111 0.10786176 0.108195416 0.228674206 3.25E-05 -0.155706805 0.004968905 ctc Clostridium tetani E88 229 0.0020534 0.79476 0.79476 0.79476 0.049726 5 Multiple Anaerobic 4.5921 5.5459 0.61403 0.073766693 0.266267481 0.243192679 0.00085122 -0.169517416 0.021067134 cte Chlorobaculum tepidum 227 0.0061602 0.64758 0.62996 0.62115 0.014654 2 Specialized 2 Anaerobic 4.7743 4.4317 0.59104 0.055636869 0.404127326 0.146920182 0.018672966 -0.056934558 0.364284638 dde Desulfovibrio desulfuricans 272 0.0041068 0.66912 0.65074 0.63235 0.037504 Multiple Anaerobic 3.893 5.1618 0.66245 0.133641316 0.02753747 0.18113888 0.003635926 -0.096008042 0.125484806 deh Dehalococcoides sp. CBDB1 158 0.0041068 0.72785 0.72152 0.72152 Multiple Anaerobic 5.3822 3.6962 0.66307 0.140798235 0.077638674 0.154873787 0.016565429 -0.04041836 0.534053063 det Dehalococcoides ethenogenes 155 0.0020534 0.69677 0.69677 0.69677 Multiple 19 Anaerobic 6.2468 3.6129 0.64002 0.137407017 0.088203209 0.194275891 0.001827974 -0.097486306 0.120474769 dno Dichelobacter nodosus 136 0.0020534 0.73529 0.73529 0.72059 Host-associated Anaerobic 3.8 3.9706 0.6256 0.001485934 0.986301894 0.13558861 0.031087183 -0.046726176 0.459330843 dps Desulfotalea psychrophila 275 0.0082136 0.73455 0.71273 0.63636 Specialized 0.37 Anaerobic 4.1752 5.4909 0.58786 0.190089603 0.001541025 0.151169054 0.014503174 -0.066497756 0.28446955 drm Desulfotomaculum reducens 138 0.0020534 0.81159 0.81159 0.81159 Aquatic Anaerobic 4.7591 4.1739 0.64002 0.15933207 0.061951031 0.170198518 0.001415459 -0.101999932 0.056956112 dsy Desulfitobacterium hafniense 326 0.0020534 0.75767 0.75767 0.70552 0.049192 Specialized Anaerobic 3.7508 6.3067 0.59447 0.144801403 0.00883878 0.168951772 0.004584518 -0.113120685 0.05869437 dvu Desulfovibrio vulgaris Hildenborough 271 0.0082136 0.69373 0.64945 0.62731 Multiple 14 Anaerobic 4.3667 4.9299 0.6628 0.108588606 0.074324307 0.258162287 1.83E-07 -0.203477689 4.42E-05 fnu Fusobacterium nucleatum 213 0.0020534 0.76995 0.76995 0.76995 0.026125 4 Host-associated 0.72 Anaerobic 4.6085 4.9108 0.62336 0.128723173 0.06073666 0.22449562 0.000139749 -0.201107143 0.00066649 gme Geobacter metallireducens 283 0.0041068 0.74912 0.72792 0.63251 0.025124 Aquatic Anaerobic 4.0248 5.4134 0.58626 0.175438876 0.003063661 0.092779589 0.111177241 -0.10516859 0.070801825 gsu Geobacter sulfurreducens 283 0.0020534 0.75265 0.75265 0.75265 Multiple 6 Anaerobic 3.9504 5.6113 0.54151 0.134182305 0.023975378 0.218436871 0.00021287 -0.204254059 0.00054542 har Herminiimonas arsenicoxydans 313 0.0041068 0.70288 0.68051 0.64537 Aquatic Anaerobic 2.9455 5.7061 0.56626 0.251643513 6.58E-06 0.225470054 0.005075289 -0.178184982 0.027551268 hdu Haemophilus ducreyi 198 0.0020534 0.85354 0.85354 0.81818 0.024461 Host-associated 1.8 Anaerobic 3.6041 5.1717 0.60087 0.0823482 0.248760493 0.23865491 2.69E-05 -0.169566747 0.0030674 msu Mannheimia succiniciproducens 328 0.014374 0.78049 0.69817 0.67073 Host-associated Anaerobic 3.948 5.5 0.6086 0.207821434 0.000150098 0.222861592 0.001942679 -0.187197958 0.009511263 mta Moorella thermoacetica 240 0.0020534 0.72083 0.72083 0.72083 Aquatic Anaerobic 4.795 5.2583 0.59653 0.191587088 0.002880465 0.209662194 0.000186919 -0.189517661 0.000751444 nis Nitratiruptor sp. SB155-2 221 0.0041068 0.70136 0.63348 0.52036 Specialized Anaerobic 5.1955 4.0814 0.60969 0.214025234 0.001370266 0.237448745 2.11E-06 -0.213199262 2.18E-05 pac Propionibacterium acnes 305 0.0020534 0.76066 0.76066 0.75082 Host-associated 5.1 Anaerobic 3.977 5.6 0.62266 0.270031789 1.70E-06 0.292167607 2.96E-05 -0.129832897 0.068293141 pca Pelobacter carbinolicus 283 0.0020534 0.72085 0.72085 0.60777 Aquatic Anaerobic 4.0496 5.3074 0.59486 0.098931475 0.096714244 0.198719681 0.011501589 -0.237822355 0.002382942 pgi Porphyromonas gingivalis 172 0.0020534 0.78488 0.78488 0.78488 0.033525 Host-associated 2.7 Anaerobic 5.5789 4.1977 0.70395 0.174690551 0.021906104 0.115861655 0.078864152 -0.088858838 0.178342872 pin Psychromonas ingrahamii 289 0.0041068 0.83737 0.82353 0.7474 Aquatic Anaerobic 3.1424 6.0692 0.62017 0.101150654 0.086068048 0.373470902 2.15E-09 -0.284439835 7.27E-06 plt Pelodictyon luteolum 237 0.0020534 0.66245 0.66245 0.64135 Multiple Anaerobic 4.75 4.3544 0.6553 0.05764808 0.376953368 0.320615857 2.54E-05 -0.298467431 9.39E-05 ppd Pelobacter propionicus 263 0.0041068 0.73764 0.73764 0.70342 Multiple Anaerobic 3.9542 5.1863 0.62932 0.150546815 0.014534551 0.415409354 6.31E-05 -0.300045077 0.004749922 sat Syntrophus aciditrophicus 260 0.0020534 0.74615 0.74615 0.74615 Multiple Anaerobic 4.2625 5.2923 0.64986 0.161845803 0.008939237 0.330109016 3.31E-08 -0.282560801 2.71E-06 stc Streptococcus thermophilus CNRZ1066 223 0.01848 0.69955 0.67265 0.60987 Multiple Anaerobic 5.3784 4.583 0.63859 0.202303145 0.002401361 0.165455818 0.003817016 -0.17807973 0.001826477 stl Streptococcus thermophilus LMG18311 223 0.01848 0.69955 0.67265 0.60987 Multiple 0.43 Anaerobic 5.3784 4.583 0.64079 0.202303145 0.002401361 0.210172655 0.001806994 -0.16439612 0.015103818 swo Syntrophomonas wolfei 188 0.0020534 0.67553 0.67553 0.67553 Multiple Anaerobic 4.7326 4.1383 0.65026 0.111901556 0.126291762 0.184083392 0.018659175 -0.119885063 0.127430362 tcx Thiomicrospira crunogena 278 0.0041068 0.71942 0.69424 0.58993 Aquatic Anaerobic 4.3718 4.4532 0.63318 0.197652844 0.00092159 0.188730429 0.023486583 -0.085837476 0.30632589 tde Treponema denticola 174 0.0020534 0.8046 0.8046 0.8046 Host-associated 5 Anaerobic 4.4393 4.2759 0.69081 0.306320248 3.94E-05 0.335152883 6.56E-09 -0.269770148 3.83E-06 tdn Thiomicrospira denitrificans 242 0.016427 0.70248 0.66116 0.55372 unknown Anaerobic 4.4315 4.5455 0.64246 0.131428853 0.041068584 0.120377206 0.038801296 -0.08256216 0.157230667 tle Thermotoga lettingae 73 0.0061602 0.58904 0.56164 0.52055 Specialized Anaerobic 3.0139 3.9452 0.62406 0.245567714 0.036251096 0.262074803 5.10E-07 -0.246441823 2.44E-06 tma Thermotoga maritima 257 0.0020534 0.75097 0.75097 0.75097 0.031216 2 Specialized 1.2 Anaerobic 4.0508 4.9027 0.63134 0.280043267 5.14E-06 0.156488722 0.030629172 -0.021856928 0.764084294 tte Thermoanaerobacter tengcongensis 257 0.0020534 0.77043 0.77043 0.77043 0.043663 2 Specialized 1.1 Anaerobic 4.0039 5.3619 0.64482 0.280978921 4.76E-06 0.276600859 3.31E-05 -0.249512267 0.000191109 zmo Zymomonas mobilis 270 0.0041068 0.68519 0.62593 0.61852 Multiple Anaerobic 3.342 4.8667 0.58294 0.281628238 2.58E-06 0.270800577 5.09E-05 -0.243405833 0.000285738 ade Anaeromyxobacter dehalogenans 314 0.016427 0.78981 0.73567 0.67197 Terrestrial Facultative 3.6869 6.3758 0.61873 0.318814699 7.54E-09 0.235762229 0.000852496 -0.177967497 0.0123493 aeh Alkalilimnicola ehrlichei 302 0.0020534 0.71854 0.71854 0.69536 Aquatic Facultative 3.5349 5.8411 0.6067 0.189740881 0.000920293 0.123110115 0.1118732 0.064832511 0.403756945 aha Aeromonas hydrophila 434 0.01232 0.8341 0.81797 0.78802 Multiple Facultative 2.8684 7.53 0.5827 0.250613568 1.22E-07 0.194027097 0.001973248 -0.108321979 0.086150705 apl Actinobacillus pleuropneumoniae 290 0.065708 0.78966 0.7 0.66552 Host-associated Facultative 3.173 5.7862 0.59069 0.172434748 0.003220446 0.146546437 0.061140556 0.039998227 0.611093709 baa Bacillus anthracis A2012 375 0.18275 0.856 0.77333 0.672 0.053391 Multiple Facultative 2.8743 6.3733 0.59608 0.25883048 3.73E-07 0.063525133 0.420469456 0.083236868 0.290806923 bam Burkholderia cepacia 404 0.045175 0.85644 0.82673 0.79703 Multiple Facultative 3.129 6.5545 0.5873 0.29981603 7.77E-10 0.148549309 0.023636643 -0.190189894 0.003639493 ban Bacillus anthracis Ames 384 0.24846 0.82813 0.77083 0.73958 0.057428 Multiple Facultative 2.8407 6.7813 0.59915 0.274822435 4.41E-08 0.227564927 0.00022784 -0.203721323 0.000998535 bar Bacillus anthracis Ames 0581 384 0.24846 0.82813 0.77083 0.73958 Terrestrial Facultative 2.8381 6.8438 0.62362 0.274885325 4.38E-08 0.280105332 7.23E-07 -0.185014329 0.001215625 bat Bacillus anthracis Sterne 388 0.24846 0.84536 0.77577 0.74227 Multiple Facultative 2.8501 6.7887 0.61941 0.279943051 2.04E-08 0.281674064 0.000145826 -0.318892481 1.52E-05 bha Bacillus halodurans 386 0.0061602 0.81606 0.81606 0.74352 0.060748 5 Multiple 0.6 Facultative 3.6961 6.342 0.57554 0.230326094 4.83E-06 0.109583053 0.156108515 0.089791225 0.245654358 bld Bacillus licheniformis DSM13 405 0.055441 0.82716 0.8 0.75802 Terrestrial Facultative 3.0965 7.042 0.58671 0.306735973 2.85E-10 0.215852397 0.000401612 -0.09658646 0.116752756 bli Bacillus licheniformis ATCC 14580 395 0.065708 0.82025 0.77722 0.74937 Terrestrial 0.58 Facultative 3.0939 7.1392 0.60224 0.291466673 3.57E-09 0.299821378 1.45E-06 -0.24013615 0.000130054 bmb Brucella abortus 360 0.0061602 0.80278 0.78611 0.75 Host-associated 2 Facultative 3.4624 6.0778 0.55639 0.373174634 2.44E-13 0.234167028 0.000102733 -0.076626992 0.209437217 bmf Brucella melitensis biovar Abortus 361 0.014374 0.78947 0.74792 0.73684 Host-associated 2 Facultative 3.3972 6.6316 0.58418 0.351853006 5.85E-12 0.210782875 0.000688205 -0.179937542 0.003870537 bov Brucella ovis 230 0.0020534 0.83913 0.83913 0.68261 Host-associated Facultative 3.8908 5.1043 0.60046 0.179662544 0.006292463 0.272415551 1.21E-06 -0.205717937 0.000278406 bsu Bacillus subtilis 397 0.051335 0.81612 0.79597 0.73552 0.060554 6 Terrestrial 0.43 Facultative 3.3283 6.4736 0.58452 0.298683101 1.27E-09 0.266284618 1.63E-06 -0.203108516 0.000285207 btk Bacillus thuringiensis 97-27 406 0.49692 0.85222 0.75862 0.75123 Multiple Facultative 2.8346 6.936 0.60217 0.221120312 6.88E-06 0.26438704 3.99E-06 -0.282962278 7.45E-07 btl Bacillus thuringiensis Al Hakam 406 0.1499 0.83251 0.79557 0.75123 Multiple Facultative 2.8296 6.9163 0.60028 0.263503815 7.10E-08 0.332497363 2.79E-09 -0.26769516 2.19E-06 bur Burkholderia sp. 383 515 0.13142 0.88738 0.85243 0.83883 Multiple Facultative 3.0837 8.0777 0.57448 0.300171971 3.49E-12 0.258282875 5.84E-06 -0.28341772 6.00E-07 bvi Burkholderia vietnamiensis 307 0.014374 0.86645 0.8241 0.77199 Multiple Facultative 3.4902 6.3453 0.5761 0.256267572 5.42E-06 0.264834742 3.30E-06 -0.284605607 5.36E-07 cbu Coxiella burnetii RSA 493 210 0.0020534 0.76667 0.76667 0.76667 5 Multiple 8 Facultative 5.0335 4.8762 0.57321 0.234945459 0.000597966 0.251862263 0.000279098 -0.111996798 0.110751069 cef Corynebacterium efficiens 310 0.0061602 0.76129 0.73226 0.68387 0.044407 5 Multiple Facultative 3.9741 5.671 0.59294 0.214975922 0.00013649 0.22897411 0.000268962 -0.090906514 0.152652256 cgb Corynebacterium glutamicum ATCC 13032 (Bielefeld) 342 0.020534 0.73977 0.7193 0.71345 0.047444 Multiple Facultative 3.9765 5.5146 0.58991 0.226915068 2.27E-05 0.304201969 8.06E-08 -0.206272919 0.000329992 cgl Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko) 323 0.045175 0.77399 0.71827 0.70588 5 Multiple 1.2 Facultative 3.9099 5.5913 0.56707 0.125580082 0.023999133 0.223863249 0.000323223 -0.149861822 0.016842091 cjk Corynebacterium jeikeium 281 0.022587 0.72598 0.68327 0.6548 Multiple Facultative 4.7679 5.1744 0.63344 0.227359963 0.000120685 0.210351689 0.000249129 -0.150332954 0.0092298 cph Chlorobium phaeobacteroides 253 0.0082136 0.70356 0.66403 0.62055 Aquatic Facultative 4.5357 4.7668 0.60593 0.084256516 0.181574747 0.325737471 2.60E-07 -0.309050421 1.10E-06 cps Colwellia psychrerythraea 382 0.045175 0.80105 0.75654 0.73298 Specialized Facultative 3.0945 6.8429 0.57579 0.28870399 9.08E-09 0.278886816 2.62E-08 -0.256626307 3.31E-07 csa Chromohalobacter salexigens 346 0.0020534 0.76301 0.76301 0.74566 Aquatic Facultative 3.5391 5.896 0.58119 0.185464036 0.00052537 0.225270742 9.77E-05 -0.143366105 0.013875603 cvi Chromobacterium violaceum 416 0.21766 0.85096 0.78365 0.77644 0.05582 Multiple 0.8 Facultative 3.0554 7.1827 0.5812 0.250659326 2.22E-07 0.332079959 8.07E-11 -0.340091339 2.63E-11 cya Cyanobacteria Yellowstone A-Prime 272 0.0061602 0.67279 0.67279 0.59559 Specialized Facultative 5.2878 4.5294 0.60048 0.20239698 0.000786625 0.200526134 0.000407555 -0.121100094 0.033921694 cyb Cyanobacteria Yellowstone B-Prime 282 0.0061602 0.69858 0.69858 0.60993 Specialized Facultative 4.7367 4.7518 0.5958 0.220977303 0.000183505 0.148952434 0.301891243 -0.262016313 0.066042764 dar Dechloromonas aromatica 360 0.063655 0.74444 0.70278 0.675 Multiple Facultative 3.2061 6.5111 0.57351 0.316810252 7.78E-10 0.180918915 0.000672186 -0.131984991 0.013466055 eba Azoarcus sp. EbN1 338 0.057495 0.81065 0.76036 0.70414 Terrestrial 4.3 Facultative 3.1157 6.6627 0.5561 0.221470233 4.00E-05 0.252782049 3.03E-05 -0.179633338 0.003283346 eca Erwinia carotovora 468 0.17043 0.82906 0.76709 0.74786 Multiple 0.2 Facultative 3.1863 7.1197 0.56969 0.287960867 2.18E-10 0.283983035 0.033914529 -0.36350166 0.005891984 ecc Escherichia coli CFT073 (UPEC) 504 0.23819 0.85317 0.7996 0.79563 0.055772 4 Host-associated Facultative 2.7853 7.9683 0.60241 0.305095794 2.56E-12 0.164986839 0.308975798 -0.146411692 0.367324005 ece Escherichia coli O157 EDL933 (EHEC) 519 0.13758 0.83237 0.7842 0.78035 0.056892 4 Host-associated Facultative 2.8282 8.1272 0.5963 0.332934111 6.71E-15 0.232756208 0.207644764 -0.316039815 0.083267908 eci Escherichia coli UTI89 (UPEC) 544 0.24435 0.87316 0.81985 0.79596 Host-associated Facultative 2.7993 8.4706 0.62349 0.346373172 8.87E-17 0.157120585 0.00868428 -0.120239007 0.045174663 ecj Escherichia coli K-12 W3110 506 0.13758 0.82806 0.77668 0.77273 4 Host-associated Facultative 2.8099 8.0277 0.56352 0.333247325 1.37E-14 0.049170503 0.697299252 -0.048413187 0.701741392 eco Escherichia coli K-12 MG1655 530 0.13758 0.83585 0.78679 0.78302 0.062167 4 Host-associated 0.35 Facultative 2.8129 8.0075 0.56836 0.342738662 4.70E-16 0.049170503 0.697299252 -0.048413187 0.701741392 ecp Escherichia coli 536 (UPEC) 507 0.0082136 0.87377 0.86391 0.86391 Host-associated Facultative 2.8478 7.9487 0.58166 0.274023345 3.49E-10 -0.000529837 0.997553031 -0.020514681 0.90546832 ecs Escherichia coli O157 Sakai (EHEC) 515 0.13758 0.83107 0.78252 0.77864 0.055785 4 Host-associated Facultative 2.8268 8.0466 0.60639 0.330255321 1.43E-14 0.234390927 0.000163378 -0.19447298 0.001846417 ecv Escherichia coli APEC O1 452 0.0020534 0.85398 0.85398 0.85398 Host-associated Facultative 3.1397 7.646 0.62181 0.282265432 1.00E-09 0.255245239 1.43E-05 -0.218480783 0.000217831 ecw Escherichia coli E24377A 488 0.039014 0.84426 0.78689 0.78074 Host-associated Facultative 2.7906 7.6762 0.58577 0.32843535 9.75E-14 0.292899024 1.77E-06 -0.288374313 2.59E-06 ecx Escherichia coli HS 481 0.15811 0.84615 0.78794 0.77963 Host-associated Facultative 2.7729 7.7464 0.57496 0.338803266 2.20E-14 0.150208674 0.001502511 -0.124416595 0.0086793 efa Enterococcus faecalis 246 0.0020534 0.85772 0.85772 0.80894 0.055252 5 Multiple 0.5 Facultative 3.7306 5.6911 0.61225 0.218189377 0.000568208 0.208934175 9.91E-05 -0.178760612 0.000898417 hch Hahella chejuensis 390 0.0041068 0.82308 0.82051 0.74615 Aquatic Facultative 3.3213 6.8769 0.5651 0.228142771 5.34E-06 0.278890122 0.011694299 -0.314461018 0.004248832 hin Haemophilus influenzae (serotype d) 241 0.020534 0.75934 0.71369 0.59336 0.035003 4 Host-associated 0.5 Facultative 3.7833 5.3361 0.58532 0.179052192 0.005307552 0.164104192 0.004374026 -0.137040328 0.017553033 hip Haemophilus influenzae PittEE 166 0.0020534 0.66265 0.66265 0.6506 Host-associated Facultative 5.0848 4.241 0.69085 0.186793014 0.015964652 0.184154428 0.000916688 -0.171395984 0.002058448 hiq Haemophilus influenzae PittGG 87 0.0020534 0.70115 0.70115 0.70115 Host-associated Facultative 6.686 3.7701 0.5983 0.195988355 0.068864975 0.163625657 0.043982649 -0.046589671 0.568702077 hit Haemophilus influenzae 86-028NP (nontypeable) 267 0.032854 0.8015 0.7191 0.63296 Host-associated Facultative 3.5865 5.618 0.57775 0.213086927 0.000455095 0.255350857 0.016985491 -0.295911746 0.005389673 hso Haemophilus somnus 285 0.016427 0.77193 0.71579 0.64912 0.030358 Host-associated Facultative 3.3803 5.5719 0.6082 0.140550505 0.017590149 0.29248124 1.72E-08 -0.280800778 6.53E-08 lac Lactobacillus acidophilus 191 0.010267 0.82723 0.74346 0.74346 Multiple 1.8 Facultative 5.0737 4.712 0.64582 0.315188362 8.95E-06 0.094099194 0.354216303 -0.108745854 0.283968456 lbr Lactobacillus brevis 197 0.0020534 0.77157 0.77157 0.77157 Multiple Facultative 4.7857 4.9949 0.60372 0.271627193 0.000112899 0.260334947 2.27E-06 -0.256432009 3.25E-06 lbu Lactobacillus delbrueckii ATCC BAA-365 168 0.0020534 0.76786 0.76786 0.76786 Multiple Facultative 5.8024 3.869 0.70092 0.122248113 0.114424777 0.224429428 0.143031092 -0.221663404 0.148155006 lca Lactobacillus casei 252 0.0020534 0.82937 0.82937 0.82937 Multiple Facultative 4.239 5.9206 0.59523 0.35360316 7.79E-09 0.328842201 8.71E-10 -0.342895189 1.45E-10 ldb Lactobacillus delbrueckii ATCC 11842 164 0.0020534 0.71951 0.71951 0.71951 Multiple Facultative 5.3436 3.9756 0.68582 0.150811739 0.053904917 0.225470377 3.50E-06 -0.184038968 0.000163181 lga Lactobacillus gasseri 163 0.0041068 0.76074 0.69325 0.69325 0.051798 Host-associated Facultative 4.7901 4.135 0.66762 0.301274273 9.31E-05 0.303120178 2.13E-08 -0.239353859 1.17E-05 lin Listeria innocua 303 0.020534 0.72607 0.71287 0.65677 0.061995 5 Multiple 0.6 Facultative 4.4503 5.4125 0.61007 0.183563661 0.001330215 0.30020188 2.18E-06 -0.290728931 4.66E-06 lip Lawsonia intracellularis 177 0.0020534 0.67797 0.67797 0.67797 Host-associated Facultative 8.983 3.5593 0.71936 0.039047594 0.605847013 0.284558052 5.32E-08 -0.298767978 1.04E-08 ljo Lactobacillus johnsonii 169 0.0061602 0.78698 0.71006 0.6568 Host-associated 0.9 Facultative 4.3512 4.6627 0.64938 0.331461521 1.07E-05 0.163949991 0.028307733 -0.079404631 0.290699572 lla Lactococcus lactis subsp. lactis IL1403 265 0.01848 0.75849 0.7434 0.62642 0.052133 5 Multiple 0.7 Facultative 4.428 5.3585 0.60901 0.231871328 0.000139651 0.297110003 8.61E-09 -0.291652292 1.65E-08 llc Lactococcus lactis subsp. cremoris SK11 249 0.0020534 0.76305 0.76305 0.63454 Multiple Facultative 3.9758 5.2048 0.61413 0.205052521 0.001137765 0.256574732 1.52E-06 -0.224829168 2.71E-05 llm Lactococcus lactis subsp. cremoris MG1363 270 0.0020534 0.75556 0.75556 0.63704 Multiple Facultative 3.3197 5.5481 0.62696 0.201851803 0.000850613 0.304468679 1.66E-08 -0.267682422 8.03E-07 lme Leuconostoc mesenteroides 256 0.0020534 0.76563 0.76563 0.76563 0.048212 Multiple Facultative 5.2588 4.4844 0.66704 0.305971701 5.98E-07 0.230294369 4.50E-05 -0.165474484 0.00358708 lmf Listeria monocytogenes F2365 308 0.0061602 0.72403 0.70455 0.6461 Multiple Facultative 4.5179 5.4286 0.60554 0.169100207 0.002909906 0.239761371 2.62E-05 -0.272518016 1.59E-06 lmo Listeria monocytogenes EGD-e 315 0.0041068 0.73333 0.73333 0.66984 0.066058 5 Multiple 1 Facultative 3.9777 5.6635 0.59762 0.183222136 0.001088325 0.256751655 5.38E-06 -0.168640023 0.003084945 lpl Lactobacillus plantarum 304 0.0020534 0.82237 0.82237 0.82237 0.071452 4 Host-associated 1.6 Facultative 3.9472 5.8553 0.60523 0.23547857 3.36E-05 0.240183514 1.45E-05 -0.125757378 0.024690823 lsa Lactobacillus sakei 204 0.0020534 0.85294 0.85294 0.80882 Multiple Facultative 4.3941 5.1471 0.61069 0.136087583 0.052280802 0.174936521 0.002131055 -0.058689743 0.306150993 lsl Lactobacillus salivarius 249 0.0020534 0.85944 0.85944 0.85944 Host-associated Facultative 4.25 5.5904 0.60147 0.274889135 1.08E-05 0.264315733 4.88E-07 -0.297531248 1.26E-08 lwe Listeria welshimeri SLCC5334 299 0.010267 0.72575 0.72575 0.69565 Multiple Facultative 3.8792 5.8194 0.57972 0.160040864 0.005542723 0.122137338 0.045352346 -0.070962895 0.246081003 maq Marinobacter aquaeolei 239 0.0020534 0.73222 0.73222 0.71967 Aquatic Facultative 3.0378 5.6485 0.60769 0.192088117 0.002865038 0.261991103 2.26E-06 -0.223493598 5.96E-05 mcp Mycoplasma capricolum 50 0.0041068 0.58 0.58 0.58 Host-associated Facultative 8.5918 2.6 0.65243 0.162417771 0.259775768 0.160128348 0.017201468 -0.136776249 0.042219416 mfl Mesoplasma florum 56 0.0020534 0.53571 0.53571 0.53571 Host-associated Facultative 8.1273 3.3214 0.5807 0.309055066 0.020468396 0.186719178 0.001349652 -0.106898221 0.068141116 mga Mycoplasma gallisepticum 40 0.0020534 0.675 0.675 0.675 0.006887 1 Host-associated 1 Facultative 6.641 3.35 0.50111 0.302911145 0.057441588 0.192890855 0.001973469 -0.1878494 0.002596744 mge Mycoplasma genitalium 31 0.0020534 0.35484 0.35484 0.35484 0.008264 1 Host-associated 12 Facultative 8.2667 2.129 0.57713 0.094250803 0.614031964 0.2089238 0.000384058 -0.120282399 0.042453319 mgm Magnetococcus sp. MC-1 278 0.0061602 0.73022 0.70144 0.58273 Aquatic Facultative 4.1588 4.6835 0.60306 0.217703962 0.000254727 0.216782291 0.000189231 -0.177330153 0.002355112 mhj Mycoplasma hyopneumoniae J 65 0.0082136 0.76923 0.75385 0.75385 Host-associated Facultative 5.9219 3.8154 0.57317 0.089544472 0.478107493 0.224268579 3.94E-05 -0.12934955 0.018737192 mhp Mycoplasma hyopneumoniae 7448 65 0.0082136 0.76923 0.75385 0.75385 Host-associated Facultative 5.9219 3.8154 0.57317 0.089544472 0.478107493 0.196561903 0.047695293 -0.22488443 0.023061147 mhy Mycoplasma hyopneumoniae 232 36 0.01232 0.55556 0.55556 0.5 Host-associated Facultative 6.4286 2.8889 0.49612 0.086106373 0.617543914 0.251291075 9.54E-06 -0.192259031 0.000767549 mmo Mycoplasma mobile 81 0.0020534 0.69136 0.69136 0.69136 Host-associated Facultative 7.2 3.5802 0.66599 0.325221333 0.003051702 0.04099961 0.636825959 -0.045335574 0.601585312 mmr Maricaulis maris 300 0.0041068 0.80667 0.77333 0.75667 Aquatic Facultative 3.4716 6.36 0.595 0.266120988 2.94E-06 0.286390969 2.14E-08 -0.265637382 2.23E-07 mmy Mycoplasma mycoides 87 0.0020534 0.68966 0.68966 0.68966 Host-associated Facultative 7.2791 3.6782 0.65422 0.318587044 0.002635102 0.196474361 0.008962597 -0.199779533 0.007852599 mpe Mycoplasma penetrans 99 0.0020534 0.79798 0.79798 0.71717 0.008679 1 Host-associated Facultative 4.5918 4 0.6175 0.354792338 0.000314241 0.297410919 1.20E-07 -0.283557762 4.77E-07 mpt Methylibium petroleiphilum 321 0.0020534 0.75389 0.75389 0.73209 Aquatic Facultative 2.9 6.7103 0.54263 0.24577866 8.40E-06 0.167219263 0.000414747 -0.14859323 0.001732919 mpu Mycoplasma pulmonis 44 0.0041068 0.59091 0.59091 0.59091 0.008951 1 Host-associated 2 Facultative 7.3256 3.5 0.41449 0.232915867 0.128128421 0.163752355 0.003616682 -0.132773695 0.018582459 nwi Nitrobacter winogradskyi 303 0.020534 0.70627 0.68317 0.64686 Terrestrial Facultative 3.7417 5.7096 0.59089 0.294977695 1.69E-07 0.202151147 6.62E-05 -0.178101555 0.000453594 ooe Oenococcus oeni 176 0.0020534 0.80114 0.80114 0.80114 0.043319 Multiple Facultative 8.4971 4.2386 0.68968 0.23774304 0.001486919 0.173753877 0.000436392 -0.155271796 0.001700779 plu Photorhabdus luminescens 435 0.10883 0.8023 0.74943 0.71954 0.065556 Host-associated 0.5 Facultative 3.1982 7.2782 0.56523 0.270940034 9.33E-09 0.317816598 4.62E-08 -0.271143729 3.69E-06 pmu Pasteurella multocida 321 0.13347 0.77259 0.68847 0.66044 0.033251 4 Host-associated 1 Facultative 3.3531 5.6012 0.59742 0.160800367 0.003870146 0.123628099 0.027252856 -0.075249953 0.180039758 ppe Pediococcus pentosaceus 71 0.0020534 0.49296 0.49296 0.49296 Multiple Facultative 7.1286 3.1549 0.71181 0.145720763 0.225299931 0.097602739 0.282831251 -0.049055693 0.590008648 ppr Photobacterium profundum 434 0.0061602 0.81567 0.79954 0.76959 Multiple 2.5 Facultative 3.0901 7.1659 0.56447 0.220685405 3.46E-06 0.180971716 0.000345962 -0.150438133 0.003009217 reh Ralstonia eutropha H16 473 0.0041068 0.87738 0.87315 0.84778 Specialized Facultative 2.9936 7.8562 0.51035 0.33004831 1.75E-13 0.100589227 0.032705473 -0.080248529 0.088711227 reu Ralstonia eutropha JMP134 445 0.057495 0.8809 0.84944 0.81124 Multiple Facultative 2.9572 8.1888 0.53617 0.229368242 1.01E-06 0.181229442 9.11E-05 -0.18416854 6.96E-05 rfr Rhodoferax ferrireducens 395 0.020534 0.79494 0.78987 0.75949 Multiple Facultative 3.0558 7.6658 0.5556 0.257227884 2.18E-07 0.237740325 6.31E-07 -0.229900123 1.49E-06 rme Ralstonia metallidurans 444 0.0020534 0.83333 0.83333 0.79279 0.074508 Specialized Facultative 2.9887 7.5676 0.5185 0.307593128 3.49E-11 0.173963798 0.02247114 -0.100170809 0.191063544 rpa Rhodopseudomonas palustris CGA009 396 0.016427 0.79545 0.7803 0.75758 Multiple Facultative 3.4 6.899 0.5597 0.311845344 2.23E-10 0.196849833 9.10E-05 -0.147982479 0.003398545 rpb Rhodopseudomonas palustris HaA2 377 0.0082136 0.80106 0.7878 0.77188 Multiple Facultative 3.4894 6.5889 0.58328 0.343402414 7.13E-12 0.261063924 6.89E-06 -0.205758753 0.000430763 rpc Rhodopseudomonas palustris BisB18 371 0.0020534 0.78167 0.78167 0.74933 Multiple Facultative 3.5054 6.8518 0.56692 0.289963644 1.28E-08 0.199484775 0.02760255 -0.237115179 0.008546662 rpd Rhodopseudomonas palustris BisB5 361 0.010267 0.78393 0.76454 0.75623 Multiple 9 Facultative 3.2833 7.0249 0.54409 0.294103221 1.23E-08 0.286790231 7.25E-06 -0.347188745 4.06E-08 rpe Rhodopseudomonas palustris BisA53 393 0.0082136 0.80407 0.78626 0.76081 0.052436 Multiple Facultative 3.3163 6.9008 0.53882 0.34389043 2.37E-12 0.223605898 2.48E-06 -0.223611022 2.48E-06 rru Rhodospirillum rubrum 356 0.0061602 0.80899 0.79494 0.77528 0.053243 Multiple Facultative 3.8592 6.8596 0.61814 0.254219318 1.18E-06 0.273228981 8.49E-06 -0.246971775 6.07E-05 rsa Renibacterium salmoninarum 339 0.0020534 0.86136 0.86136 0.82006 Host-associated Facultative 3.4467 6.3658 0.55339 0.229541643 1.97E-05 0.215653785 0.000358071 -0.195953116 0.001210766 rsh Rhodobacter sphaeroides ATCC 17029 173 0.0020534 0.80347 0.80347 0.75723 Multiple Facultative 4.5058 5.6879 0.59351 0.22778296 0.002578101 0.183375345 0.00226555 -0.149897241 0.012827687 rsp Rhodobacter sphaeroides 2.4.1 402 0.014374 0.83333 0.81592 0.79104 0.050654 Multiple Facultative 3.2219 7.6119 0.59953 0.307210789 3.11E-10 0.156573179 0.070817651 -0.043917282 0.614359986 rsq Rhodobacter sphaeroides ATCC 17025 134 0.0020534 0.8209 0.8209 0.8209 Multiple Facultative 4.406 4.9851 0.63457 0.281768985 0.000972911 0.26928025 0.000120052 -0.209260968 0.003014013 saa Staphylococcus aureus USA300 327 0.0020534 0.7737 0.7737 0.75535 Host-associated Facultative 3.8896 5.8287 0.59642 0.121981333 0.027411924 0.21591214 0.000685096 -0.193125717 0.002447128 sab Staphylococcus aureus RF122 314 0.0020534 0.80255 0.80255 0.72611 Host-associated Facultative 3.6006 6.586 0.60967 0.203355367 0.000286661 0.297533996 5.53E-08 -0.231385342 2.83E-05 sac Staphylococcus aureus COL 319 0.0041068 0.76803 0.76176 0.69906 Host-associated Facultative 3.7013 6.0376 0.58689 0.179057697 0.001320385 0.211829257 0.000301449 -0.181587098 0.002011206 sag Streptococcus agalactiae 2603 (serotype V) 215 0.01232 0.84651 0.8186 0.79535 0.049906 1 Host-associated 1.8 Facultative 5.0047 5.1814 0.62634 0.190426234 0.005084966 0.260893496 0.000130991 -0.205318678 0.002794284 sah Staphylococcus aureus JH1 172 0.0082136 0.81977 0.80233 0.58721 Host-associated Facultative 5.6082 4.6395 0.66916 0.216978956 0.0042492 0.151400094 0.052964819 -0.082180457 0.295494434 saj Staphylococcus aureus JH9 180 0.0041068 0.81111 0.8 0.62222 Host-associated Facultative 5.8324 4.7111 0.66986 0.203295444 0.006197673 0.248653484 4.29E-07 -0.222692 6.38E-06 sak Streptococcus agalactiae A909 (serotype Ia) 227 0.0061602 0.85463 0.85022 0.85022 Host-associated Facultative 5.146 5.3392 0.63155 0.245152787 0.000191258 0.029459468 0.901877633 -0.033251782 0.889316461 sam Staphylococcus aureus MW2 315 0.022587 0.77143 0.75556 0.69524 0.043693 4 Host-associated Facultative 3.7166 6.019 0.59418 0.20152878 0.000318754 0.161773528 0.008579657 -0.133073016 0.03097404 san Streptococcus agalactiae NEM316 (serotype III) 218 0.01232 0.84862 0.8211 0.79817 0.048233 1 Host-associated Facultative 5.1152 5.1835 0.61928 0.193627259 0.004109346 0.065131832 0.589443443 -0.041938231 0.728397351 sao Staphylococcus aureus NCTC8325 316 0.022587 0.78797 0.76899 0.71519 Host-associated Facultative 3.7206 6.1329 0.59605 0.186764443 0.00084919 0.284781305 7.49E-07 -0.273134967 2.16E-06 sar Staphylococcus aureus MRSA252 311 0.020534 0.78135 0.76849 0.73633 Host-associated Facultative 3.6161 6.0129 0.57752 0.183787981 0.001130484 0.277443084 4.13E-09 -0.242113594 3.30E-07 sas Staphylococcus aureus MSSA476 315 0.020534 0.76508 0.75238 0.71429 Host-associated Facultative 3.9172 5.8984 0.57426 0.189038201 0.00074567 0.236316273 8.09E-07 -0.231235451 1.41E-06 sau Staphylococcus aureus N315 314 0.020534 0.76752 0.75478 0.71656 0.045121 4 Host-associated 0.4 Facultative 3.7188 6.0127 0.59458 0.189266603 0.00074908 0.157247409 0.03351399 -0.103352813 0.163836997 sav Staphylococcus aureus Mu50 316 0.020534 0.76899 0.75633 0.72152 0.045689 4 Host-associated Facultative 3.7143 6.0506 0.5671 0.190750161 0.000652582 0.192286219 9.28E-05 -0.170123892 0.000558554 sax Staphylococcus aureus USA300 TCH1516 303 0.0020534 0.79208 0.79208 0.79208 Host-associated Facultative 2.9205 5.9736 0.59543 0.141140566 0.013933011 0.154628981 0.001559478 -0.084707457 0.084418701 saz Shewanella amazonensis 381 0.0082136 0.83465 0.8189 0.8189 Multiple Facultative 3.0816 7.0131 0.59543 0.180488937 0.000399298 0.124960598 0.011945344 -0.072021113 0.148458408 sbl Shewanella baltica OS155 319 0.016427 0.7931 0.76803 0.73041 Aquatic Facultative 3.1384 6.6583 0.64558 0.183571897 0.000988207 0.308497481 8.90E-07 -0.269030795 2.05E-05 sbm Shewanella baltica OS185 155 0.0041068 0.78065 0.74839 0.70968 Aquatic Facultative 4.1753 5.3419 0.6264 0.11201768 0.165230966 0.256406257 2.13E-06 -0.176727756 0.001202111 sbo Shigella boydii 473 0.11499 0.81607 0.76744 0.75687 Host-associated Facultative 2.8665 7.4503 0.60834 0.302200459 1.91E-11 0.180671442 7.37E-05 -0.113012986 0.013622077 sdn Shewanella denitrificans 350 0.0041068 0.80571 0.80571 0.77714 Aquatic Facultative 3.149 6.8229 0.57461 0.210420996 7.28E-05 0.176194009 0.000117155 -0.130126181 0.004587866 sdy Shigella dysenteriae 446 0.022587 0.81839 0.78475 0.75561 Host-associated Facultative 3.0045 7.3587 0.57299 0.256946834 3.72E-08 0.147302338 0.001429184 -0.116868186 0.011579094 sec Salmonella enterica serovar Choleraesuis 481 0.13758 0.81913 0.7817 0.77339 0.059936 Host-associated Facultative 2.8458 7.7921 0.58222 0.316192759 1.25E-12 0.093797237 0.047990667 -0.064743256 0.172772292 sep Staphylococcus epidermidis ATCC 12228 307 0.026694 0.76221 0.7557 0.7329 0.038032 4 Host-associated 0.8 Facultative 4.0686 5.798 0.58976 0.214238802 0.000155283 0.140472839 0.176881772 0.028154134 0.787648358 ser Staphylococcus epidermidis RP62A 306 0.026694 0.75817 0.75163 0.70915 Host-associated Facultative 3.9246 5.7451 0.57517 0.202343969 0.000368037 0.28508274 8.02E-09 -0.241192677 1.23E-06 sfl Shigella flexneri 301 (serotype 2a) 487 0.030801 0.86242 0.82546 0.77823 0.053349 4 Host-associated Facultative 3.0226 7.6057 0.57437 0.245929274 3.84E-08 0.269704831 9.89E-10 -0.252127225 1.21E-08 sfr Shewanella frigidimarina 348 0.0020534 0.79885 0.79885 0.77874 Multiple Facultative 2.9337 6.7356 0.61742 0.225743627 2.13E-05 0.226293594 2.91E-07 -0.192808283 1.33E-05 sfv Shigella flexneri 8401 (serotype 5b) 487 0.010267 0.8193 0.78645 0.7577 0.053343 Host-associated Facultative 2.9877 7.4784 0.61053 0.293775487 3.77E-11 0.203893565 1.49E-05 -0.188110427 6.66E-05 sfx Shigella flexneri 2457T (serotype 2a) 491 0.01232 0.82281 0.79022 0.76171 4 Host-associated Facultative 2.9796 7.5438 0.58224 0.297616764 1.68E-11 0.218061915 1.20E-05 -0.218986669 1.10E-05 sgo Streptococcus gordonii 186 0.0020534 0.67204 0.67204 0.67204 Host-associated Facultative 4.8162 4.129 0.65168 0.183112631 0.012360664 0.239875408 2.46E-06 -0.219241604 1.75E-05 sha Staphylococcus haemolyticus 304 0.020534 0.76316 0.74342 0.70724 Host-associated Facultative 3.8053 6.0461 0.6034 0.185806224 0.001135189 0.278272115 5.04E-08 -0.271715985 1.06E-07 she Shewanella sp. MR-4 363 0.010267 0.82094 0.79339 0.77135 Multiple Facultative 3.1851 6.8099 0.60007 0.193087123 0.00021475 0.265952292 2.93E-07 -0.23663434 5.49E-06 shm Shewanella sp. MR-7 364 0.010267 0.81319 0.79121 0.76923 Aquatic Facultative 3.2562 6.6978 0.6074 0.182561478 0.000464328 0.277882831 2.12E-08 -0.243959655 9.83E-07 shn Shewanella sp. ANA-3 379 0.01848 0.81794 0.80211 0.78892 Multiple Facultative 3.172 7.2137 0.59023 0.20155588 7.76E-05 0.266145679 0.016324971 -0.110101645 0.327831009 shw Shewanella sp. W3-18-1 322 0.0082136 0.8354 0.81056 0.76708 Multiple Facultative 3.1713 6.5093 0.65633 0.105158243 0.059444968 0.302115823 6.00E-09 -0.252066114 1.46E-06 slo Shewanella loihica 323 0.0061602 0.83282 0.80186 0.75851 Multiple Facultative 3.0932 6.774 0.64579 0.184715873 0.000851066 0.191854249 0.000381706 -0.18016961 0.000861215 smu Streptococcus mutans 265 0.0020534 0.75094 0.75094 0.75094 0.062245 4 Host-associated 0.75 Facultative 4.9205 4.9358 0.62256 0.274330533 5.85E-06 0.195463807 0.009960569 -0.240602181 0.001429339 son Shewanella oneidensis 361 0.0020534 0.80332 0.80332 0.76177 0.047179 5 Multiple 0.66 Facultative 3.25 6.5817 0.59535 0.187918313 0.000330551 0.186254564 8.98E-05 -0.188766892 7.17E-05 spa Streptococcus pyogenes MGAS10394 (serotype M6) 229 0.0041068 0.81223 0.81223 0.81223 0.054743 Host-associated Facultative 3.9123 5.9039 0.60131 0.199639465 0.00240397 0.226973396 4.29E-06 -0.17228702 0.0005213 spb Streptococcus pyogenes MGAS6180 (serotype M28) 220 0.0020534 0.81818 0.81818 0.81818 0.047824 Host-associated Facultative 3.7854 5.9455 0.57485 0.198749111 0.003069151 0.164568711 0.057413476 -0.16629692 0.054809272 spc Shewanella putrefaciens 261 0.0020534 0.83908 0.83908 0.83908 Multiple Facultative 3.9923 6.3448 0.60535 0.222051881 0.00029991 0.135670695 0.028114603 -0.113407817 0.066831445 spd Streptococcus pneumoniae D39 261 0.020534 0.76245 0.7318 0.62452 Multiple Facultative 3.8731 5.1724 0.62176 0.218180244 0.000384115 0.317651497 4.23E-09 -0.280582888 2.49E-07 spe Serratia proteamaculans 220 0.0061602 0.89545 0.85455 0.8 Multiple Facultative 3.3836 5.9909 0.64504 0.218493545 0.001106987 0.316648374 9.64E-09 -0.288482942 1.97E-07 spf Streptococcus pyogenes Manfredo (serotype M5) 181 0.010267 0.81215 0.80663 0.80663 Host-associated Facultative 4.3 5.2376 0.62025 0.19408146 0.008845977 0.314616494 9.26E-09 -0.253812605 4.41E-06 spg Streptococcus pyogenes MGAS315 (serotype M3) 194 0.0061602 0.83505 0.83505 0.83505 1 Host-associated Facultative 5.1813 4.9794 0.61343 0.205726715 0.004004957 0.268949021 6.49E-05 -0.217915967 0.001302727 sph Streptococcus pyogenes MGAS10270 (serotype M3) 237 0.0082136 0.87342 0.87342 0.87342 0.04933 Host-associated Facultative 3.9661 5.5527 0.61149 0.159239075 0.014120896 0.229895599 0.002414874 -0.231938964 0.002202087 spi Streptococcus pyogenes MGAS10750 (serotype M3) 233 0.014374 0.84979 0.84979 0.84979 Host-associated Facultative 5.0948 5.6223 0.62217 0.160255192 0.014330059 0.247990703 0.000789204 -0.228008929 0.002081137 spj Streptococcus pyogenes MGAS2096 (serotype M3) 228 0.014374 0.84649 0.84649 0.84649 Host-associated Facultative 5.163 5.4211 0.60594 0.153624091 0.020302168 0.260355305 7.20E-05 -0.175591418 0.008011624 spk Streptococcus pyogenes MGAS9429 (serotype M3) 226 0.0082136 0.86726 0.86726 0.86726 Host-associated Facultative 4.04 5.5221 0.60278 0.14212705 0.032708483 0.228836733 0.000111806 -0.170250692 0.004276909 spl Shewanella pealeana 146 0.0020534 0.85616 0.85616 0.85616 unknown Facultative 3.0759 5.863 0.54492 0.176217424 0.033368609 0.304787259 3.39E-08 -0.239299248 1.76E-05 spm Streptococcus pyogenes MGAS8232 (serotype M18) 195 0.0061602 0.8359 0.8359 0.8359 1 Host-associated Facultative 5.1598 5.0359 0.61664 0.206502627 0.003774744 0.267447192 6.36E-05 -0.214650825 0.001431087 spn Streptococcus pneumoniae TIGR4 245 0.016427 0.80408 0.76327 0.57551 0.043935 4 Multiple 0.5 Facultative 4.6311 4.8571 0.59624 0.171219379 0.007227711 0.322806799 4.26E-09 -0.256573475 3.83E-06 spr Streptococcus pneumoniae R6 255 0.014374 0.78039 0.77647 0.65882 0.044542 4 Multiple Facultative 3.8622 5.2157 0.59166 0.275708549 7.90E-06 0.300973103 6.22E-08 -0.203631691 0.000300849 sps Streptococcus pyogenes SSI-1 (serotype M3) 194 0.0061602 0.83505 0.83505 0.83505 1 Host-associated Facultative 5.1813 4.9794 0.61343 0.205726715 0.004004957 0.319077255 6.93E-09 -0.243409234 1.25E-05 spt Salmonella enterica serovar Paratyphi A 489 0.16016 0.86503 0.82618 0.80573 Host-associated Facultative 2.8709 7.6646 0.56325 0.269834121 1.32E-09 0.280961687 4.19E-06 -0.282360794 3.74E-06 spy Streptococcus pyogenes SF370 (serotype M1) 180 0.010267 0.82222 0.81111 0.81111 0.046553 1 Host-associated Facultative 4.9888 4.9111 0.59796 0.287660252 9.02E-05 0.312717954 1.50E-08 -0.241704943 1.49E-05 spz Streptococcus pyogenes MGAS5005 (serotype M1) 234 0.0082136 0.87179 0.87179 0.87179 Host-associated 0.4 Facultative 3.7425 5.8547 0.60894 0.153662465 0.018673684 0.313956869 1.17E-08 -0.240295498 1.57E-05 ssa Streptococcus sanguinis 292 0.0041068 0.80137 0.79452 0.75685 Host-associated Facultative 3.7595 5.4795 0.59606 0.277998421 1.40E-06 0.279453966 7.69E-07 -0.240393622 2.34E-05 sse Shewanella sediminis 159 0.0020534 0.81761 0.81761 0.74214 Aquatic Facultative 4.7785 5.2327 0.63206 0.172633452 0.02955423 0.284573095 1.57E-08 -0.219936425 1.48E-05 ssn Shigella sonnei 497 0.13758 0.82897 0.77465 0.76861 Host-associated Facultative 2.8286 7.6539 0.62262 0.316184659 5.31E-13 0.313199056 1.09E-08 -0.261028202 2.29E-06 ssu Streptococcus suis 05ZYH33 157 0.0020534 0.78981 0.78981 0.73885 Multiple Facultative 3.6346 4.3949 0.61617 0.291818239 0.000208656 -0.006899288 0.932101467 0.023869075 0.768143503 ste Streptococcus thermophilus LMD-9 233 0.0041068 0.75107 0.72961 0.72103 Multiple Facultative 5.3233 4.5837 0.65155 0.183960324 0.004847275 0.252896073 2.45E-08 -0.214774351 2.43E-06 stm Salmonella typhimurium LT2 507 0.13758 0.84221 0.80473 0.78501 0.064929 4 Host-associated 0.4 Facultative 2.8538 7.8146 0.5571 0.319000811 1.86E-13 0.212115084 0.000108372 -0.12441383 0.024234565 stt Salmonella enterica serovar Typhi Ty2 494 0.13758 0.82389 0.78543 0.78138 4 Host-associated Facultative 2.8418 7.6964 0.60432 0.308765212 2.26E-12 0.264614578 1.42E-07 -0.23260017 4.10E-06 sty Salmonella enterica serovar Typhi CT18 497 0.13758 0.82093 0.78672 0.7827 4 Host-associated Facultative 2.8488 7.6217 0.55795 0.311493254 1.21E-12 0.214727268 0.000326731 -0.208596879 0.000486296 sun Sulfurovum sp. NBC37-1 237 0.0041068 0.73418 0.67089 0.5865 Specialized Facultative 4.4492 4.4135 0.64409 0.224170257 0.000506739 0.277502992 1.31E-07 -0.20698906 9.58E-05 tbd Thiobacillus denitrificans 302 0.0020534 0.69868 0.69868 0.69205 Multiple Facultative 3.9203 5.2583 0.62245 0.112954957 0.049868754 0.31633506 8.02E-12 -0.272856286 4.69E-09 uur Ureaplasma urealyticum 29 0.0020534 0.55172 0.55172 0.55172 0.008143 1 Host-associated 0.9 Facultative 5.8929 2.2759 0.6685 0.298420607 0.115851627 0.248213565 3.47E-08 -0.212933618 2.45E-06 vch Vibrio cholerae O1 382 0.0041068 0.80105 0.79319 0.7801 0.047411 4 Aquatic 0.2 Facultative 3.2835 6.9372 0.61538 0.179567925 0.000420567 0.18893485 5.10E-05 -0.135743116 0.003758308 vco Vibrio cholerae O395 254 0.0020534 0.82677 0.82677 0.82677 Aquatic Facultative 3.0553 6.6535 0.61565 0.117834017 0.060759669 0.30933774 3.13E-08 -0.25692404 5.11E-06 vpa Vibrio parahaemolyticus 410 0.028747 0.81463 0.79268 0.76098 0.047078 4 Aquatic 0.2 Facultative 3.0856 7.161 0.6102 0.212181886 1.47E-05 0.32577168 5.37E-09 -0.27566611 9.70E-07 vvu Vibrio vulnificus CMCP6 417 0.022587 0.82254 0.80096 0.78657 0.042732 4 Aquatic 0.16 Facultative 3.1202 6.8921 0.61185 0.230791787 1.91E-06 0.210845967 2.68E-06 -0.141865548 0.001697903 vvy Vibrio vulnificus YJ016 433 0.020534 0.83141 0.81293 0.80139 0.040466 Aquatic Facultative 3.1343 6.9238 0.62214 0.232058358 1.05E-06 0.318389255 1.22E-09 -0.235054463 9.36E-06 xau Xanthobacter autotrophicus 161 0.0020534 0.75155 0.75155 0.75155 Multiple Facultative 4.75 5.0311 0.62886 0.219128745 0.005225515 0.251897966 1.74E-08 -0.207981234 3.68E-06 ypa Yersinia pestis Antiqua 458 0.10678 0.81441 0.77511 0.76419 Multiple Facultative 3.0722 7.0087 0.58295 0.310241434 1.12E-11 0.255057385 9.90E-09 -0.231954835 2.02E-07 ype Yersinia pestis CO92 453 0.090349 0.84106 0.79249 0.77263 0.060746 5 Multiple 1.25 Facultative 3.0376 7.0022 0.60924 0.306568303 2.59E-11 0.24733159 6.22E-06 -0.166537734 0.002557454 ypg Yersinia pestis Angola 365 0.034908 0.86575 0.84384 0.7726 Multiple Facultative 2.8242 6.5315 0.6174 0.283556759 3.54E-08 0.271993417 0.000172967 -0.165727804 0.023781257 ypi Yersinia pseudotuberculosis IP31758 400 0.034908 0.8625 0.8425 0.7775 Multiple Facultative 2.8521 6.75 0.61752 0.303027376 6.11E-10 0.322530507 8.67E-09 -0.252485987 8.33E-06 ypk Yersinia pestis KIM 450 0.028747 0.82444 0.81333 0.76889 0.055012 5 Multiple Facultative 3.0379 7.0089 0.57277 0.292366343 2.56E-10 0.286745188 2.67E-08 -0.230199706 9.41E-06 ypm Yersinia pestis Mediaevails 457 0.10678 0.82057 0.78118 0.76586 Multiple Facultative 3.0548 7.0328 0.58597 0.28878359 3.15E-10 0.280044267 5.52E-08 -0.198040327 0.000142893 ypn Yersinia pestis Nepal516 442 0.069815 0.80995 0.76697 0.75113 Multiple Facultative 3.0544 7.0362 0.59731 0.307925258 3.67E-11 0.313221251 4.51E-10 -0.250055372 8.20E-07 ypp Yersinia pestis Pestoides 279 0.0020534 0.77061 0.77061 0.73477 Multiple Facultative 4.3633 5.6774 0.64849 0.142949434 0.016880984 0.304936009 2.35E-08 -0.229799149 3.14E-05 yps Yersinia pseudotuberculosis IP32953 470 0.17864 0.82979 0.77872 0.75957 Multiple 0.5 Facultative 3.0746 7.0851 0.57819 0.29244128 1.01E-10 0.159559257 0.001385261 -0.126786806 0.011249352 azo Azoarcus sp. BH72 398 0.024641 0.79899 0.78141 0.73618 Host-associated Microaerophilic 3.2343 6.4322 0.55868 0.306756643 4.06E-10 0.202075581 7.94E-05 -0.197711494 0.000113775 bbu Borrelia burgdorferi 36 0.0020534 0.61111 0.61111 0.55556 4 Host-associated 4 Microaerophilic 8.0571 2.3333 0.68566 -0.010972213 0.949359022 0.271127483 7.54E-07 -0.14095491 0.011208737 cco Campylobacter concisus 13826 166 0.0041068 0.59036 0.56024 0.56024 Host-associated Microaerophilic 4.4667 4.1807 0.64444 0.206204618 0.007689845 0.223774502 1.73E-05 -0.176512887 0.000742741 ccv Campylobacter curvus 223 0.0020534 0.69955 0.69955 0.69955 Host-associated Microaerophilic 4.3333 4.5022 0.58181 0.185608257 0.005430103 0.211067444 8.39E-06 -0.201625214 2.12E-05 cff Campylobacter fetus 243 0.030801 0.73251 0.65432 0.52675 Host-associated Microaerophilic 4.1983 4.642 0.61781 0.259090533 4.35E-05 0.207961445 0.000657572 -0.147886611 0.015983089 cjd Campylobacter jejuni subsp. doylei 269.97 149 0.0020534 0.68456 0.68456 0.68456 Multiple Microaerophilic 4.7432 3.906 0.66573 0.216256077 0.00807466 0.311019375 1.55E-09 -0.281607672 5.25E-08 cje Campylobacter jejuni NCTC11168 239 0.028747 0.69456 0.55649 0.5272 5 Multiple 1.5 Microaerophilic 4.7941 4.3096 0.6299 0.205786869 0.001378971 0.304968084 2.57E-06 -0.276238246 2.23E-05 cjj Campylobacter jejuni 81-176 210 0.024641 0.77143 0.60952 0.58095 Multiple Microaerophilic 5.7129 4.1143 0.65995 0.193162334 0.004969811 0.299433733 6.18E-06 -0.247184187 0.000213 cjr Campylobacter jejuni RM1221 243 0.028747 0.69959 0.56379 0.53498 Multiple Microaerophilic 4.7851 4.3128 0.64526 0.214635075 0.000757392 0.286110584 2.62E-06 -0.242394208 7.61E-05 cju Campylobacter jejuni 81116 214 0.0020534 0.68224 0.68224 0.61215 0.016524 Multiple Microaerophilic 4.4742 4.0935 0.64157 0.157592521 0.02109344 0.276534338 5.76E-06 -0.198866703 0.001239256 gur Geobacter uraniumreducens 153 0.0020534 0.82353 0.82353 0.82353 Multiple Microaerophilic 4.1447 5.3856 0.61236 0.221660514 0.005893566 0.019627443 0.772205304 -0.031314965 0.644121972 hac Helicobacter acinonychis 191 0.0020534 0.56021 0.56021 0.56021 Host-associated Microaerophilic 5.3947 4.0524 0.66826 0.067820503 0.351223275 0.285703991 9.67E-05 -0.180159777 0.015228398 mag Magnetospirillum magneticum 299 0.0020534 0.73244 0.73244 0.70903 0.029377 Aquatic Microaerophilic 3.8725 5.4916 0.61303 0.250820047 1.14E-05 0.276263697 9.65E-05 -0.13802106 0.054961221 sgl Sodalis glossinidius 326 0.075975 0.73006 0.68712 0.66871 Host-associated Microaerophilic 3.2615 5.638 0.6234 0.227913406 3.27E-05 0.290678217 5.37E-06 -0.174449808 0.007100459 sth Symbiobacterium thermophilum 289 0.0020534 0.78547 0.78547 0.73356 Terrestrial 4.2 Microaerophilic 3.4306 5.9031 0.61459 0.294431559 3.45E-07 0.334514351 1.69E-07 -0.275786882 1.95E-05 wsu Wolinella succinogenes 243 0.0061602 0.76132 0.6749 0.53086 0.029354 Host-associated 1 Microaerophilic 4.5537 4.3292 0.63104 0.142643496 0.026181499 0.328421184 3.91E-07 -0.249591681 0.000139819 aba Acidobacteria bacterium 318 0.014374 0.81761 0.77987 0.75157 unknown unknown 4.9117 6.3396 0.61804 0.243924014 1.09E-05 0.311812977 1.74E-06 -0.187303959 0.004724684 art Arthrobacter sp. FB24 173 0.0020534 0.73988 0.73988 0.73988 unknown unknown 6.6744 4.3468 0.67849 0.218464278 0.003882172 0.034474435 0.679534463 0.011115357 0.894069187 asu Actinobacillus succinogenes 114 0.0020534 0.81579 0.81579 0.73684 Host-associated unknown 5.6903 3.8246 0.67976 0.259585619 0.005286297 0.279109851 7.77E-05 -0.159645408 0.025793183 bab Buchnera aphidicola Bp 105 0.0020534 0.47619 0.47619 0.47619 0.014184 1 Host-associated unknown 9.4327 3.0286 0.69058 -0.074557834 0.449710304 0.271325082 1.66E-05 -0.18723463 0.003263553 bas Buchnera aphidicola Sg 99 0.0020534 0.54545 0.54545 0.54545 0.016484 1 Host-associated 36 unknown 8.551 3.2121 0.68826 0.107194594 0.290934645 0.261273003 2.39E-05 -0.173850576 0.005373258 bch Burkholderia cenocepacia HI2424 430 0.084189 0.87674 0.82093 0.80465 unknown unknown 3.028 7.0605 0.54762 0.296271091 3.68E-10 0.276263697 9.65E-05 -0.13802106 0.054961221 bci Baumannia cicadellinicola 147 0.0020534 0.70068 0.70068 0.68027 Host-associated unknown 4.6918 3.4286 0.70882 -0.012252412 0.882903158 0.209967307 2.82E-06 -0.141316616 0.001731942 bcl Bacillus clausii 402 0.030801 0.82338 0.80597 0.75124 unknown unknown 3.6434 6.6965 0.60765 0.247607798 4.97E-07 0.198352318 0.007602985 -0.098361742 0.188962193 bcn Burkholderia cenocepacia AU1054 419 0.053388 0.87589 0.81384 0.80668 unknown unknown 3.2464 7.3031 0.52262 0.280001461 5.50E-09 0.295753227 4.16E-06 -0.188956647 0.003717568 bfl Candidatus Blochmannia floridanus 162 0.0041068 0.52469 0.52469 0.5 1 Specialized 36 unknown 4.3975 3.5432 0.66812 -0.030265555 0.702222338 0.273905216 1.65E-06 -0.256834062 7.36E-06 bga Borrelia garinii 55 0.0041068 0.65455 0.65455 0.65455 Host-associated unknown 10.037 2.7273 0.57911 -0.036137405 0.793373873 0.25260631 1.25E-05 -0.186958944 0.001330136 bma Burkholderia mallei ATCC 23344 433 0.014374 0.85681 0.8037 0.76443 Host-associated 0.4 unknown 2.963 7.1871 0.51866 0.314786081 2.05E-11 0.243354262 0.001995019 -0.15630987 0.049119578 bml Burkholderia mallei NCTC 10229 336 0.0020534 0.86012 0.86012 0.86012 Host-associated unknown 3.2149 5.9226 0.53389 0.253888473 2.43E-06 0.251768618 1.27E-08 -0.206825188 3.33E-06 bmn Burkholderia mallei NCTC 10247 494 0.14784 0.85223 0.80364 0.7834 Host-associated unknown 3.0548 7.4737 0.52832 0.314246387 8.76E-13 0.349915641 1.20E-10 -0.292075218 1.03E-07 bmu Burkholderia multivorans 152 0.0020534 0.78947 0.78947 0.70395 Host-associated unknown 5.2252 4.5789 0.57221 0.285589542 0.000361792 0.114904369 0.151859764 0.006898964 0.931661973 bmv Burkholderia mallei SAVP1 360 0.0020534 0.85556 0.85556 0.78056 Host-associated unknown 3.039 6.2667 0.57582 0.247040304 2.09E-06 0.171543547 0.010277598 -0.015253217 0.820803082 bpn Candidatus Blochmannia pennsylvanicus 170 0.0020534 0.49412 0.49412 0.47059 unknown unknown 4.3787 3.5647 0.69193 -0.049990028 0.517381968 0.198331285 0.002354933 -0.07673428 0.243323617 bra Bradyrhizobium sp. ORS278 457 0.01232 0.83807 0.82932 0.814 Host-associated unknown 2.8333 7.488 0.52648 0.314939078 5.57E-12 0.226213541 0.000104728 -0.15605617 0.007866191 buc Buchnera aphidicola APS 131 0.0061602 0.61832 0.61832 0.61832 0.007937 1 Host-associated unknown 11.354 3.0229 0.74227 0.088399274 0.31535637 0.171543547 0.010277598 -0.015253217 0.820803082 cab Chlamydophila abortus 105 0.01848 0.5619 0.5619 0.5619 Host-associated 24 unknown 7.1538 3.4095 0.64918 0.007600208 0.938665061 0.191818712 1.37E-05 -0.138645214 0.001752547 cbe Clostridium beijerinckii 130 0.0020534 0.8 0.8 0.8 unknown unknown 4.3101 4.6154 0.67163 0.165529691 0.059821614 0.240847559 5.98E-08 -0.204128986 4.79E-06 cca Chlamydophila caviae 111 0.01848 0.56757 0.56757 0.56757 0.007014 1 Host-associated 24 unknown 8.4909 3.3514 0.67661 -0.121332136 0.204606901 0.24177309 4.83E-08 -0.203218683 4.95E-06 cfe Chlamydophila felis 116 0.01848 0.58621 0.58621 0.58621 Host-associated unknown 8.3043 3.3276 0.65795 -0.079104137 0.398627635 0.215591982 0.000835306 -0.140359489 0.030765945 ckl Clostridium kluyveri 225 0.0020534 0.72 0.72 0.53778 Aquatic unknown 3.2545 5.1822 0.61515 0.166119846 0.01258575 0.257516674 0.000167062 -0.229408597 0.000833854 cmu Chlamydia muridarum 105 0.01848 0.6 0.6 0.6 0.004425 1 Host-associated unknown 7.1346 3.4667 0.65475 -0.072482608 0.462459953 0.056963412 0.437474696 0.009106946 0.90128524 cpa Chlamydophila pneumoniae AR39 108 0.01848 0.61111 0.61111 0.61111 0.006295 1 Host-associated unknown 7.0467 3.4444 0.63533 -0.034728785 0.721226448 0.228115441 0.000135594 -0.203543516 0.000684713 cpj Chlamydophila pneumoniae J138 109 0.01848 0.61468 0.61468 0.61468 0.006548 1 Host-associated unknown 7.0185 3.4495 0.63354 -0.041342297 0.669501212 0.218266069 0.000310066 -0.160949482 0.008175387 cpn Chlamydophila pneumoniae CWL029 109 0.01848 0.61468 0.61468 0.61468 0.006641 1 Host-associated unknown 7.0185 3.4495 0.63354 -0.041342297 0.669501212 0.194471505 0.001662795 -0.119474978 0.054813549 cpt Chlamydophila pneumoniae TW183 109 0.01848 0.61468 0.61468 0.61468 0.006289 Host-associated unknown 7.0185 3.4495 0.62864 -0.041342297 0.669501212 0.240822197 5.82E-05 -0.200982645 0.000838739 cta Chlamydia trachomatis serovar A 108 0.0020534 0.5463 0.5463 0.5463 0.006704 Host-associated 24 unknown 7.3458 3.4815 0.65819 -0.017898252 0.854127653 0.228246746 0.000224198 -0.219443129 0.000393974 ctr Chlamydia trachomatis serovar D 103 0.014374 0.53398 0.53398 0.53398 1 Host-associated 24 unknown 7.7451 3.3981 0.64082 -0.038623793 0.698497587 0.261797807 7.51E-06 -0.248799033 2.15E-05 ech Ehrlichia chaffeensis 110 0.0061602 0.69091 0.69091 0.69091 Host-associated unknown 7.2569 3.4182 0.67944 0.055457483 0.564992597 0.25651803 2.54E-05 -0.275400779 5.82E-06 ecn Ehrlichia canis 121 0.010267 0.71074 0.71074 0.71074 Host-associated unknown 6.7917 3.7851 0.65483 0.120908189 0.186489094 0.242830417 3.64E-05 -0.20294676 0.000593002 ent Enterobacter sp. 638 230 0.0041068 0.88261 0.85217 0.85217 unknown unknown 3.952 6.0957 0.60286 0.308969946 1.77E-06 0.280055003 4.33E-06 -0.297452827 9.90E-07 erg Ehrlichia ruminantium Gardel 115 0.0061602 0.65217 0.65217 0.65217 Host-associated unknown 7.1053 3.4609 0.70185 0.041124284 0.66256411 0.232427752 4.53E-05 -0.16307816 0.004493167 eru Ehrlichia ruminantium Welgevonden (South Africa) 126 0.0020534 0.68254 0.68254 0.68254 Host-associated unknown 5 3.6984 0.66907 0.01570417 0.861446764 0.190780888 0.001393345 -0.16751743 0.005105455 erw Ehrlichia ruminantium Welgevonden (France) 124 0.0082136 0.68548 0.68548 0.68548 Host-associated unknown 4.9919 3.7419 0.67046 0.106818696 0.237675117 0.146195837 0.054240505 0.023230947 0.760922514 fal Frankia alni 377 0.0082136 0.81432 0.80371 0.7878 Host-associated unknown 3.4973 6.3183 0.54935 0.196514229 0.000122805 0.197042589 0.002072501 -0.173697414 0.006754164 gbe Granulobacter bethesdensis 349 0.01848 0.81089 0.77077 0.75358 Multiple unknown 3.1207 5.8338 0.54779 0.306247 5.17E-09 0.128023538 0.036200671 -0.107396114 0.079257353 gvi Gloeobacter violaceus 303 0.0020534 0.73597 0.73597 0.66007 0.033634 Terrestrial unknown 4.3841 5.3201 0.58265 0.258118568 5.32E-06 0.251696225 3.40E-05 -0.262376025 1.51E-05 hha Halorhodospira halophila 161 0.0020534 0.70186 0.70186 0.6646 unknown unknown 3.85 4.1491 0.61419 0.214597085 0.006263896 0.405145178 1.23E-13 -0.350831443 2.23E-10 mjl Mycobacterium sp. JLS 254 0.0020534 0.83465 0.83465 0.83465 Multiple unknown 4.5415 6.0472 0.61929 0.249252248 5.91E-05 -0.166046037 0.160325108 0.283404402 0.015113223 mkm Mycobacterium sp. KMS 282 0.0041068 0.84752 0.84752 0.81206 Multiple unknown 4.4164 6.1135 0.63124 0.243564788 3.56E-05 0.236019211 0.000133815 -0.140991053 0.023787513 mmc Mycobacterium sp. MCS 342 0.0041068 0.81871 0.81287 0.74561 unknown unknown 4.1818 6.4035 0.6038 0.220213109 3.99E-05 0.22605055 0.000258584 -0.146350517 0.01890529 mms Minibacterium massiliensis 321 0.0061602 0.76947 0.72897 0.68847 Aquatic unknown 2.9406 5.9065 0.53089 0.271505158 7.87E-07 0.296112188 8.15E-08 -0.22645007 4.86E-05 net Nitrosomonas eutropha 319 0.014374 0.74295 0.70846 0.65204 Multiple unknown 3.6415 5.3542 0.58178 0.26943611 1.04E-06 0.341772228 6.40E-10 -0.279220243 5.85E-07 noc Nitrosococcus oceani 330 0.014374 0.75455 0.71818 0.65455 Aquatic unknown 3.7568 5.4485 0.5986 0.260547067 1.60E-06 0.068811218 0.722828826 -0.079200053 0.68298951 nse Neorickettsia sennetsu 102 0.0020534 0.62745 0.62745 0.62745 Multiple unknown 6.6634 3.3725 0.69103 -0.082649738 0.408890267 0.314704948 3.15E-10 -0.25383212 4.97E-07 oan Ochrobactrum anthropi 135 0.0041068 0.87407 0.84444 0.77778 Terrestrial unknown 3.0597 5.0222 0.64542 0.300309118 0.000401833 0.268782539 1.41E-05 -0.086406788 0.169791489 par Psychrobacter arcticum 314 0.01232 0.78981 0.70064 0.67516 Specialized unknown 3.7093 5.9108 0.6029 0.191541981 0.000644305 0.110545858 0.132022039 0.05839183 0.427300314 pcr Psychrobacter cryohalolentis 319 0.0082136 0.75549 0.73668 0.66771 Multiple unknown 3.6006 5.906 0.5577 0.20157173 0.000290852 0.295160091 1.20E-09 -0.238456076 1.10E-06 pcu Candidatus Protochlamydia amoebophila 123 0.0020534 0.60976 0.60976 0.60976 Host-associated unknown 5.1803 3.9512 0.66449 0.119002282 0.189862067 0.277433553 1.11E-08 -0.231505852 2.16E-06 pen Pseudomonas entomophila 451 0.078029 0.88027 0.84479 0.80931 Multiple unknown 3.1178 7.3525 0.56678 0.307266426 2.57E-11 0.254421975 1.39E-07 -0.19262892 7.53E-05 pma Prochlorococcus marinus SS120 258 0.0061602 0.64729 0.64729 0.63178 3 Aquatic unknown 4.8638 4.4496 0.66591 0.11697891 0.060616517 0.241433103 3.68E-07 -0.18016369 0.000163895 pmb Prochlorococcus marinus AS9601 270 0.010267 0.68148 0.65926 0.65926 0.010627 Aquatic unknown 5.1338 4.6296 0.66704 0.164185715 0.006857179 0.209552352 0.0310923 -0.044750576 0.648749007 pmf Prochlorococcus marinus MIT 9303 275 0.0061602 0.68364 0.64364 0.64364 Aquatic unknown 5.2299 4.3709 0.66604 0.238589383 6.43E-05 0.303699891 0.001075191 -0.236939782 0.011511054 pmh Prochlorococcus marinus MIT 9215 134 0.0020534 0.66418 0.66418 0.66418 Aquatic unknown 7.015 3.3582 0.70549 0.259616152 0.002451731 0.225335744 0.000399879 -0.141174807 0.027779811 pmi Prochlorococcus marinus MIT9312 199 0.0041068 0.73869 0.73367 0.70854 Aquatic unknown 5.3687 4.0804 0.67434 0.092625373 0.193186781 0.243687191 4.72E-07 -0.237163395 9.66E-07 pmt Prochlorococcus marinus MIT9313 244 0.0061602 0.73361 0.72951 0.71721 0.013687 Aquatic unknown 5.358 4.3525 0.65149 0.171869231 0.007124886 0.260771144 0.000834677 -0.287948486 0.000212268 rde Roseobacter denitrificans 476 0.067762 0.85294 0.82353 0.79622 Multiple unknown 3.28 7.5042 0.5739 0.332805149 8.96E-14 0.241187354 6.03E-07 -0.249320568 2.42E-07 rfe Rickettsia felis 94 0.0020534 0.57447 0.57447 0.57447 Host-associated unknown 7.0538 3.3191 0.64873 0.163759762 0.114764867 0.236783848 9.76E-07 -0.24000968 6.87E-07 sit Silicibacter sp. TM1040 376 0.0061602 0.82713 0.82181 0.79255 Multiple unknown 3.0613 7.5 0.59624 0.297776222 3.89E-09 0.301401838 4.24E-10 -0.302181076 3.80E-10 syc Synechococcus elongatus PCC6301 275 0.0041068 0.70545 0.70182 0.65818 Aquatic unknown 4.8248 4.6691 0.60168 0.228636329 0.00013076 0.219792731 0.00025245 -0.181460674 0.002616873 syd Synechococcus sp. CC9605 269 0.0020534 0.68773 0.68773 0.68773 Aquatic unknown 4.6604 4.6245 0.62833 0.252426536 2.80E-05 0.22175541 0.000178612 -0.183942096 0.001960529 sye Synechococcus sp. CC9902 259 0.0041068 0.73745 0.73745 0.73745 Aquatic unknown 4.9651 4.4402 0.65944 0.195702263 0.001551069 0.267981672 1.01E-07 -0.239884483 2.05E-06 syf Synechococcus elongatus PCC7942 273 0.0041068 0.71795 0.71062 0.68132 Aquatic unknown 5.0551 4.5934 0.62617 0.240479753 5.96E-05 0.288337292 1.14E-08 -0.24487246 1.45E-06 syg Synechococcus sp. CC9311 257 0.0061602 0.71984 0.70817 0.70817 Aquatic unknown 4.3242 4.7237 0.61727 0.210310686 0.000690989 0.239936543 2.03E-07 -0.191913092 3.56E-05 syn Synechocystis sp. PCC6803 285 0.0020534 0.69474 0.69474 0.65614 0.028734 3 Aquatic unknown 3.8486 5.2281 0.58593 0.257505487 1.07E-05 0.22033615 2.19E-06 -0.177927272 0.000140706 syr Synechococcus sp. RCC307 263 0.0041068 0.69202 0.68441 0.58175 Aquatic unknown 4.2595 4.8061 0.64139 0.24875623 4.52E-05 0.13519008 0.009714628 -0.083167582 0.112690905 syw Synechococcus sp. WH8102 283 0.0061602 0.67845 0.67845 0.66784 0.013508 3 Aquatic 6 unknown 4.7057 4.5795 0.62199 0.16479363 0.005452439 0.168470837 0.000716767 -0.11227926 0.024725609 syx Synechococcus sp. WH7803 261 0.0020534 0.68199 0.68199 0.63218 Aquatic unknown 4.3308 4.7893 0.59541 0.257542253 2.53E-05 0.156435097 0.000869139 -0.086732263 0.06603042 tel Thermosynechococcus elongatus 268 0.0061602 0.71642 0.64925 0.58582 0.016566 2 Specialized unknown 4.9176 4.7985 0.58395 0.232820466 0.000119762 0.240706974 1.90E-07 -0.193342842 3.17E-05 vei Verminephrobacter eiseniae 187 0.0082136 0.79679 0.7754 0.71658 Host-associated unknown 3.6828 5.3797 0.6251 0.208277526 0.004229832 0.253454187 6.59E-08 -0.200548677 2.16E-05 vfi Vibrio fischeri 408 0.026694 0.80392 0.76716 0.75735 Multiple 0.3 unknown 3.0786 7.3333 0.61904 0.25618334 1.55E-07 0.252707356 1.94E-05 -0.214607697 0.000305347 wbm Wolbachia wBm 106 0.0061602 0.66038 0.66038 0.66038 Host-associated 14 unknown 4.6667 3.434 0.67025 0.011701275 0.905237615 0.257806586 1.42E-08 -0.219492526 1.55E-06 wol Wolbachia wMel 113 0.0020534 0.61947 0.61947 0.61947 Host-associated unknown 4.7768 3.4336 0.66826 0.020117403 0.832501353 0.147145659 0.01552826 -0.238131195 7.76E-05