Table_S8 The pairs between replicates and between TF with same known motifs (e.g. Jun/Fos, Myc/Max, FOXA1/FOXA2, GATA1/GATA2, HNF4A/HNF4G, AP-2alpha/AP-2gamma) are not listed here. TF1 TF2 Max_Count Max_Distance Max_-log10(p-value) Count_Pos_significant Cell c-Jun:S c-Myc:C 85 5 39.8 102 K562 c-Jun:S c-Myc:S 76 12 42.1 116 K562 c-Jun:S c-Myc:S-IFNa30 34 13 16.2 15 K562 c-Jun:S c-Myc:S-IFNa6h 50 10 24.3 80 K562 c-Jun:S c-Myc:S-IFNg6h 118 4 72.8 124 K562 c-Jun:S CTCF:B 52 14 21.4 32 K562 c-Jun:S CTCF:C 59 0 30.3 61 K562 c-Jun:S CTCF:ST 46 7 25.8 56 K562 c-Jun:S Egr-1:M 89 37 39.1 111 K562 c-Jun:S ELF1:M 114 5 68.3 126 K562 c-Jun:S GABP:M 90 0 46.6 115 K562 c-Jun:S GATA1:S 36 17 27.3 87 K562 c-Jun:S GATA2:M 68 13 29.8 95 K562 c-Jun:S GATA2:S 65 16 51.5 140 K562 c-Jun:S GATA2:W 61 17 40.7 118 K562 c-Jun:S Max:S 26 7 11.5 10 K562 c-Jun:S Max:M 240 3 152.9 131 K562 c-Jun:S NF-E2:S 600 2 400 2 K562 c-Jun:S NRSF:M 94 13 39.9 117 K562 c-Jun:S PU.1:M 52 5 32.1 38 K562 c-Jun:S SRF:M 34 11 24.1 42 K562 c-Jun:S STAT1:S-IFNg6h 23 5 11.5 14 K562 c-Jun:S USF1:M 105 4 78.5 111 K562 c-Jun:S YY1:M-v1 85 7 36.6 87 K562 c-Jun:S YY1:M-v2 78 13 28.2 95 K562 c-Jun:S-IFNa6h c-Myc:S-IFNg6h 23 5 14.7 25 K562 c-Jun:S-IFNa6h ELF1:M 21 6 11.1 2 K562 c-Jun:S-IFNa6h GABP:M 21 6 14.3 9 K562 c-Jun:S-IFNa6h GATA2:M 21 10 8.6 5 K562 c-Jun:S-IFNa6h GATA2:S 27 21 23.5 52 K562 c-Jun:S-IFNa6h Max:M 42 4 26.2 15 K562 c-Jun:S-IFNa6h NF-E2:S 105 3 243.2 4 K562 c-Jun:S-IFNa6h NRSF:M 29 22 19.3 12 K562 c-Jun:S-IFNa6h PU.1:M 20 6 14.4 1 K562 c-Jun:S-IFNa6h USF1:M 24 5 18.1 5 K562 c-Jun:S-IFNg30 c-Myc:C 34 28 17.7 26 K562 c-Jun:S-IFNg30 c-Myc:S 31 12 19.7 30 K562 c-Jun:S-IFNg30 c-Myc:S-IFNa6h 21 15 10.8 4 K562 c-Jun:S-IFNg30 c-Myc:S-IFNg6h 57 4 43.4 92 K562 c-Jun:S-IFNg30 Egr-1:M 45 37 27.9 39 K562 c-Jun:S-IFNg30 ELF1:M 64 5 49.2 20 K562 c-Jun:S-IFNg30 GABP:M 36 6 22.6 65 K562 c-Jun:S-IFNg30 GATA1:S 23 16 18.3 41 K562 c-Jun:S-IFNg30 GATA2:M 44 20 21.6 85 K562 c-Jun:S-IFNg30 GATA2:S 59 19 53.4 137 K562 c-Jun:S-IFNg30 GATA2:W 43 16 33.4 108 K562 c-Jun:S-IFNg30 Max:M 107 3 74.1 94 K562 c-Jun:S-IFNg30 NF-E2:S 368 2 400 2 K562 c-Jun:S-IFNg30 NRSF:M 50 10 29.8 105 K562 c-Jun:S-IFNg30 PU.1:M 40 5 29 6 K562 c-Jun:S-IFNg30 USF1:M 52 4 42 40 K562 c-Jun:S-IFNg30 YY1:M-v2 31 21 10 4 K562 c-Jun:S-IFNg6h c-Myc:C 20 17 9.9 2 K562 c-Jun:S-IFNg6h c-Myc:S-IFNg6h 33 24 24.6 57 K562 c-Jun:S-IFNg6h Egr-1:M 21 12 9.5 3 K562 c-Jun:S-IFNg6h ELF1:M 23 6 10.7 5 K562 c-Jun:S-IFNg6h GABP:M 23 0 14.9 15 K562 c-Jun:S-IFNg6h GATA2:M 28 12 12.1 28 K562 c-Jun:S-IFNg6h GATA2:S 35 12 29.5 92 K562 c-Jun:S-IFNg6h GATA2:W 28 16 21.5 48 K562 c-Jun:S-IFNg6h Max:M 48 2 27.2 28 K562 c-Jun:S-IFNg6h NF-E2:S 235 3 400 4 K562 c-Jun:S-IFNg6h NRSF:M 40 22 29.8 48 K562 c-Jun:S-IFNg6h USF1:M 25 5 16.4 11 K562 c-Myc:C CTCF:B 93 7 34 73 K562 c-Myc:C CTCF:C 110 1 51.6 90 K562 c-Myc:C CTCF:ST 107 0 64.6 85 K562 c-Myc:C Egr-1:M 255 2 132.6 77 K562 c-Myc:C ELF1:M 114 16 31.1 96 K562 c-Myc:C FOS:W 47 5 27.6 11 K562 c-Myc:C FOSL1:M 72 5 41.2 44 K562 c-Myc:C GABP:M 131 16 41.7 108 K562 c-Myc:C GATA1:S 42 11 23.3 54 K562 c-Myc:C GATA2:M 57 16 14.7 27 K562 c-Myc:C GATA2:S 76 12 53.4 114 K562 c-Myc:C GATA2:W 76 11 40.9 96 K562 c-Myc:C JunB:W 87 4 30.4 94 K562 c-Myc:C JunD:W 205 6 93.4 131 K562 c-Myc:C NF-E2:S 22 7 14.8 1 K562 c-Myc:C NRSF:M 156 0 51.1 104 K562 c-Myc:C SRF:M 31 26 9.7 3 K562 c-Myc:C STAT1:S-IFNg6h 31 21 10.4 1 K562 c-Myc:C YY1:S 102 5 58.1 4 K562 c-Myc:C YY1:M-v1 181 5 69 102 K562 c-Myc:C YY1:M-v2 265 5 143.6 100 K562 c-Myc:S CTCF:B 47 16 10.9 18 K562 c-Myc:S CTCF:C 60 20 22.9 60 K562 c-Myc:S CTCF:ST 51 30 23.2 30 K562 c-Myc:S Egr-1:M 193 2 111.7 51 K562 c-Myc:S ELF1:M 85 36 25.2 99 K562 c-Myc:S FOS:W 32 5 17.6 19 K562 c-Myc:S FOSL1:M 43 5 20.8 30 K562 c-Myc:S GABP:M 92 14 29.3 106 K562 c-Myc:S GATA1:S 33 25 19.4 47 K562 c-Myc:S GATA2:M 49 16 15.1 14 K562 c-Myc:S GATA2:S 52 12 37.8 85 K562 c-Myc:S GATA2:W 58 11 33.7 77 K562 c-Myc:S JunB:W 73 4 29.4 93 K562 c-Myc:S JunD:W 149 6 72.4 123 K562 c-Myc:S NRSF:M 105 6 32.6 90 K562 c-Myc:S SRF:M 25 15 8.4 3 K562 c-Myc:S STAT1:S-IFNg6h 25 12 9 2 K562 c-Myc:S YY1:S 92 5 59.3 3 K562 c-Myc:S YY1:M-v1 124 5 47 93 K562 c-Myc:S YY1:M-v2 219 5 134.8 94 K562 c-Myc:S-IFNa30 Egr-1:M 94 3 55.5 3 K562 c-Myc:S-IFNa30 ELF1:M 43 22 12.2 1 K562 c-Myc:S-IFNa30 GABP:M 46 13 14 13 K562 c-Myc:S-IFNa30 GATA2:S 30 14 21.9 5 K562 c-Myc:S-IFNa30 GATA2:W 31 13 17.1 6 K562 c-Myc:S-IFNa30 JunB:W 35 2 12.3 8 K562 c-Myc:S-IFNa30 JunD:W 63 7 26.4 67 K562 c-Myc:S-IFNa30 NRSF:M 52 10 15.2 19 K562 c-Myc:S-IFNa30 YY1:S 47 3 29.5 2 K562 c-Myc:S-IFNa30 YY1:M-v1 52 3 15.9 6 K562 c-Myc:S-IFNa30 YY1:M-v2 100 3 59.5 5 K562 c-Myc:S-IFNa6h CTCF:B 41 24 10.8 1 K562 c-Myc:S-IFNa6h CTCF:C 41 25 12.2 9 K562 c-Myc:S-IFNa6h CTCF:ST 34 10 11.6 5 K562 c-Myc:S-IFNa6h Egr-1:M 124 2 62 14 K562 c-Myc:S-IFNa6h ELF1:M 64 34 17.7 41 K562 c-Myc:S-IFNa6h FOS:W 25 4 12.7 2 K562 c-Myc:S-IFNa6h FOSL1:M 26 5 8.4 4 K562 c-Myc:S-IFNa6h GABP:M 74 11 23.9 68 K562 c-Myc:S-IFNa6h GATA1:S 30 13 18.9 19 K562 c-Myc:S-IFNa6h GATA2:M 40 59 12.5 3 K562 c-Myc:S-IFNa6h GATA2:S 38 13 25.9 66 K562 c-Myc:S-IFNa6h GATA2:W 41 13 21.1 48 K562 c-Myc:S-IFNa6h JunB:W 57 3 22.6 49 K562 c-Myc:S-IFNa6h JunD:W 104 4 45.7 108 K562 c-Myc:S-IFNa6h NRSF:M 77 12 21.4 66 K562 c-Myc:S-IFNa6h STAT1:S-IFNg6h 26 15 11.9 3 K562 c-Myc:S-IFNa6h YY1:S 64 4 37.1 1 K562 c-Myc:S-IFNa6h YY1:M-v1 82 4 25.7 54 K562 c-Myc:S-IFNa6h YY1:M-v2 163 4 98.4 27 K562 c-Myc:S-IFNg6h CTCF:B 82 13 27 80 K562 c-Myc:S-IFNg6h CTCF:C 91 0 36.9 102 K562 c-Myc:S-IFNg6h CTCF:ST 106 1 66.2 100 K562 c-Myc:S-IFNg6h Egr-1:M 289 2 172.7 64 K562 c-Myc:S-IFNg6h ELF1:M 108 28 28.8 114 K562 c-Myc:S-IFNg6h FOS:W 77 4 62.2 56 K562 c-Myc:S-IFNg6h FOSL1:M 92 4 63.3 80 K562 c-Myc:S-IFNg6h GABP:M 120 4 36.7 119 K562 c-Myc:S-IFNg6h GATA1:S 52 12 34 85 K562 c-Myc:S-IFNg6h GATA2:M 93 16 38.7 90 K562 c-Myc:S-IFNg6h GATA2:S 87 13 64.2 149 K562 c-Myc:S-IFNg6h GATA2:W 95 12 58.8 134 K562 c-Myc:S-IFNg6h JunB:W 121 3 57.8 128 K562 c-Myc:S-IFNg6h JunD:W 221 5 105 141 K562 c-Myc:S-IFNg6h NF-E2:S 24 6 18.3 9 K562 c-Myc:S-IFNg6h NRSF:M 153 6 50.5 118 K562 c-Myc:S-IFNg6h PU.1:M 47 16 16.4 8 K562 c-Myc:S-IFNg6h SRF:M 29 32 8.5 5 K562 c-Myc:S-IFNg6h STAT1:S-IFNg6h 37 8 15.6 26 K562 c-Myc:S-IFNg6h YY1:S 81 4 38.8 1 K562 c-Myc:S-IFNg6h YY1:M-v1 141 4 43.6 100 K562 c-Myc:S-IFNg6h YY1:M-v2 266 4 145.9 106 K562 CTCF:B c-Myc:S-IFNg6h 82 13 27 80 K562 CTCF:B Egr-1:M 74 7 15.6 20 K562 CTCF:B ELF1:M 79 25 23.7 66 K562 CTCF:B GABP:M 63 5 13.3 12 K562 CTCF:B JunB:W 62 16 20.5 54 K562 CTCF:B JunD:W 190 0 103.5 109 K562 CTCF:B Max:M 211 3 89 133 K562 CTCF:B NRSF:M 78 6 19.5 51 K562 CTCF:B STAT1:S-IFNg6h 24 2 8.4 1 K562 CTCF:B USF1:M 43 21 8.8 2 K562 CTCF:B YY1:S 148 6 148.2 1 K562 CTCF:B YY1:M-v1 228 6 150.2 98 K562 CTCF:B YY1:M-v2 421 6 400 83 K562 CTCF:C Egr-1:M 858 4 400 22 K562 CTCF:C ELF1:M 84 42 29.5 108 K562 CTCF:C GABP:M 66 18 17.4 53 K562 CTCF:C JunB:W 61 14 21.4 77 K562 CTCF:C JunD:W 220 0 140.7 112 K562 CTCF:C Max:M 274 1 149.5 135 K562 CTCF:C NRSF:M 100 1 37.7 71 K562 CTCF:C PU.1:M 33 22 9.6 3 K562 CTCF:C STAT1:S-IFNg6h 25 3 10.1 4 K562 CTCF:C USF1:M 43 32 10 8 K562 CTCF:C YY1:M-v1 182 5 107.6 103 K562 CTCF:C YY1:M-v2 134 12 67.5 96 K562 CTCF:ST Egr-1:M 928 3 400 9 K562 CTCF:ST ELF1:M 74 26 32.3 101 K562 CTCF:ST GABP:M 64 15 24 45 K562 CTCF:ST JunB:W 51 9 21.8 68 K562 CTCF:ST JunD:W 188 5 140.9 107 K562 CTCF:ST Max:M 329 2 250.4 136 K562 CTCF:ST NRSF:M 81 7 34.9 62 K562 CTCF:ST PU.1:M 29 37 11 2 K562 CTCF:ST STAT1:S-IFNg6h 24 2 12.4 6 K562 CTCF:ST USF1:M 37 33 10.9 5 K562 CTCF:ST YY1:S 43 7 24.5 2 K562 CTCF:ST YY1:M-v1 168 11 117.5 95 K562 CTCF:ST YY1:M-v2 283 7 283.8 93 K562 Egr-1:M c-Jun:S-IFNa6h 20 10 9.9 4 K562 Egr-1:M CTCF:ST 910 3 400 10 K562 Egr-1:M ELF1:M 129 2 36.6 97 K562 Egr-1:M FOS:W 130 37 123.5 29 K562 Egr-1:M FOSL1:M 224 37 218.5 70 K562 Egr-1:M GABP:M 128 5 33.6 113 K562 Egr-1:M GATA1:S 30 22 10 2 K562 Egr-1:M GATA2:S 55 15 27.6 80 K562 Egr-1:M GATA2:W 52 19 17.2 31 K562 Egr-1:M JunB:W 95 38 32.1 41 K562 Egr-1:M JunD:W 198 36 77.2 129 K562 Egr-1:M Max:S 142 4 125.4 2 K562 Egr-1:M Max:M 567 3 400 121 K562 Egr-1:M NRSF:M 130 12 27.7 89 K562 Egr-1:M PU.1:M 73 2 37.9 4 K562 Egr-1:M USF1:M 206 2 137.5 73 K562 Egr-1:M YY1:M-v1 131 7 26.7 82 K562 Egr-1:M YY1:M-v2 114 13 21.5 44 K562 ELF1:M Egr-1:M 142 2 45.3 100 K562 ELF1:M FOS:W 88 5 70.6 14 K562 ELF1:M FOSL1:M 111 5 83 41 K562 ELF1:M GABP:M 637 1 400 111 K562 ELF1:M GATA1:S 30 30 10.5 6 K562 ELF1:M GATA2:M 62 13 14.3 5 K562 ELF1:M GATA2:S 53 30 24.3 73 K562 ELF1:M GATA2:W 63 19 26 38 K562 ELF1:M JunB:W 104 4 40.7 62 K562 ELF1:M JunD:W 239 6 116.8 150 K562 ELF1:M Max:M 192 13 48.3 145 K562 ELF1:M NRSF:M 127 12 32.8 114 K562 ELF1:M PU.1:M 6490 0 400 71 K562 ELF1:M SRF:M 78 10 63.1 49 K562 ELF1:M STAT1:S-IFNa30 93 4 170.1 3 K562 ELF1:M STAT1:S-IFNg30 289 4 400 3 K562 ELF1:M STAT1:S-IFNg6h 409 3 400 5 K562 ELF1:M USF1:M 87 10 31.5 97 K562 ELF1:M YY1:M-v1 125 2 34.1 121 K562 ELF1:M YY1:M-v2 139 5 41.3 131 K562 FOS:W ELF1:M 63 5 40.5 16 K562 FOS:W GABP:M 35 31 15.6 42 K562 FOS:W GATA1:S 21 12 11.2 2 K562 FOS:W GATA2:M 37 21 12.6 13 K562 FOS:W GATA2:S 40 20 27.7 73 K562 FOS:W GATA2:W 33 21 16.7 21 K562 FOS:W Max:M 238 3 221.5 101 K562 FOS:W NF-E2:S 826 2 400 2 K562 FOS:W NRSF:M 51 8 25.2 79 K562 FOS:W PU.1:M 50 5 38.8 2 K562 FOS:W USF1:M 83 4 76.7 30 K562 FOS:W YY1:M-v1 34 7 14 7 K562 FOS:W YY1:M-v2 40 13 15.8 23 K562 FOSL1:M GABP:M 63 5 32.6 78 K562 FOSL1:M GATA1:S 24 21 15 15 K562 FOSL1:M GATA2:M 39 12 14.7 13 K562 FOSL1:M GATA2:S 49 14 35.4 113 K562 FOSL1:M GATA2:W 42 25 25.6 61 K562 FOSL1:M Max:M 264 3 220.1 108 K562 FOSL1:M NF-E2:S 653 2 400 2 K562 FOSL1:M NRSF:M 73 11 35.1 99 K562 FOSL1:M PU.1:M 56 5 44.1 2 K562 FOSL1:M SRF:M 22 4 11.9 8 K562 FOSL1:M USF1:M 85 4 66.7 62 K562 FOSL1:M YY1:M-v1 49 7 17.9 36 K562 FOSL1:M YY1:M-v2 57 7 22.8 46 K562 GABP:M FOSL1:M 63 5 32.7 80 K562 GABP:M GATA1:S 54 6 38.4 98 K562 GABP:M GATA2:M 58 8 18.1 74 K562 GABP:M GATA2:S 89 5 76.6 128 K562 GABP:M GATA2:W 80 20 48.3 114 K562 GABP:M JunB:W 89 17 33.7 99 K562 GABP:M JunD:W 179 4 77.9 129 K562 GABP:M Max:M 197 0 55.4 123 K562 GABP:M NRSF:M 167 1 61.2 107 K562 GABP:M PU.1:M 64 1 35.9 64 K562 GABP:M SRF:M 43 15 22.2 47 K562 GABP:M STAT1:S-IFNg6h 32 5 12 9 K562 GABP:M USF1:M 92 7 36.6 101 K562 GABP:M YY1:M-v1 151 6 47.9 112 K562 GABP:M YY1:M-v2 124 3 34 102 K562 GATA1:S GABP:M 57 15 42.2 98 K562 GATA1:S JunB:W 44 16 28.4 78 K562 GATA1:S JunD:W 66 15 40 110 K562 GATA1:S Max:M 75 24 38.8 56 K562 GATA1:S NRSF:M 81 1 65.3 92 K562 GATA1:S PU.1:M 26 11 14.9 1 K562 GATA1:S USF1:M 28 14 12.8 14 K562 GATA1:S YY1:M-v2 35 17 13.8 6 K562 GATA2:M Egr-1:M 49 56 9 1 K562 GATA2:M JunB:W 94 16 41 122 K562 GATA2:M JunD:W 184 20 78.3 157 K562 GATA2:M Max:M 114 28 26.6 55 K562 GATA2:M NRSF:M 112 5 50.3 95 K562 GATA2:M PU.1:M 55 22 20.4 10 K562 GATA2:M USF1:M 46 14 11.6 9 K562 GATA2:S JunB:W 97 13 74.8 151 K562 GATA2:S JunD:W 147 24 102.3 164 K562 GATA2:S Max:M 113 11 56.1 139 K562 GATA2:S NRSF:M 146 17 127 145 K562 GATA2:S PU.1:M 56 18 36.8 51 K562 GATA2:S STAT1:S-IFNg6h 22 56 15.6 3 K562 GATA2:S USF1:M 43 26 20.9 62 K562 GATA2:S YY1:M-v1 29 24 9 4 K562 GATA2:S YY1:M-v2 50 16 18.3 40 K562 GATA2:W c-Jun:S-IFNa6h 23 16 18.2 21 K562 GATA2:W JunB:W 77 11 44.9 127 K562 GATA2:W JunD:W 150 22 91.8 139 K562 GATA2:W Max:M 121 24 50.1 128 K562 GATA2:W NRSF:M 133 1 92.1 122 K562 GATA2:W PU.1:M 50 11 28.5 24 K562 GATA2:W STAT1:S-IFNg6h 22 55 12.2 2 K562 GATA2:W USF1:M 51 24 24.2 41 K562 GATA2:W YY1:M-v1 38 4 8.9 5 K562 GATA2:W YY1:M-v2 55 9 16.6 34 K562 JunB:W GATA2:W 75 18 42.9 128 K562 JunB:W Max:M 216 2 97.4 149 K562 JunB:W NF-E2:S 555 3 400 4 K562 JunB:W NRSF:M 109 16 39.5 132 K562 JunB:W PU.1:M 41 6 12.8 7 K562 JunB:W SRF:M 27 15 11.4 4 K562 JunB:W STAT1:S-IFNg6h 24 14 8.5 4 K562 JunB:W USF1:M 89 3 44.3 86 K562 JunB:W YY1:M-v1 87 5 28.4 58 K562 JunB:W YY1:M-v2 84 6 21.7 78 K562 JunD:W Max:S 43 34 15.2 34 K562 JunD:W Max:M 464 4 216.4 166 K562 JunD:W NF-E2:S 937 1 400 4 K562 JunD:W NRSF:M 230 3 95.5 140 K562 JunD:W PU.1:M 112 6 53.8 136 K562 JunD:W SRF:M 43 0 20.1 48 K562 JunD:W STAT1:S-IFNg6h 42 12 19 49 K562 JunD:W USF1:M 170 5 90.3 124 K562 JunD:W YY1:M-v1 185 3 71.5 106 K562 JunD:W YY1:M-v2 214 12 82.3 138 K562 Max:S JunD:W 50 34 21.2 33 K562 Max:S NF-E2:S 23 4 31.1 12 K562 Max:S NRSF:M 39 9 10.2 2 K562 Max:S YY1:S 37 2 22.7 1 K562 Max:S YY1:M-v1 39 2 10.5 2 K562 Max:S YY1:M-v2 64 2 33.5 1 K562 Max:M NF-E2:S 72 5 71 8 K562 Max:M NRSF:M 248 1 72.2 125 K562 Max:M PU.1:M 74 35 17.7 49 K562 Max:M SRF:M 43 9 12.3 8 K562 Max:M STAT1:S-IFNg6h 39 10 10 2 K562 Max:M YY1:S 145 3 78 7 K562 Max:M YY1:M-v1 303 3 114.3 118 K562 Max:M YY1:M-v2 575 3 400 121 K562 NF-E2:S Max:M 82 5 86.5 7 K562 NF-E2:S PU.1:M 20 37 18.1 1 K562 NF-E2:S USF1:M 36 7 36.4 7 K562 NF-E2:S YY1:M-v2 21 11 11.1 2 K562 NRSF:M PU.1:M 51 19 14.8 39 K562 NRSF:M SRF:M 32 17 8.5 2 K562 NRSF:M STAT1:S-IFNg6h 31 2 8.3 2 K562 NRSF:M USF1:M 78 2 18.8 73 K562 NRSF:M YY1:M-v1 146 10 38.2 97 K562 NRSF:M YY1:M-v2 164 3 49.1 94 K562 PU.1:M c-Jun:S-IFNg6h 31 6 24.9 2 K562 PU.1:M CTCF:B 36 34 11.7 1 K562 PU.1:M NRSF:M 52 19 15.5 35 K562 PU.1:M SRF:M 29 10 23.9 3 K562 PU.1:M USF1:M 43 34 19.5 8 K562 PU.1:M YY1:M-v2 50 33 13.9 10 K562 SRF:M PU.1:M 24 10 16.2 1 K562 SRF:M STAT1:S-IFNa30 29 33 57.8 1 K562 SRF:M STAT1:S-IFNg30 64 33 121.7 4 K562 SRF:M STAT1:S-IFNg6h 38 34 43 3 K562 SRF:M USF1:M 33 0 18.3 20 K562 SRF:M YY1:M-v1 37 7 13.3 16 K562 SRF:M YY1:M-v2 56 28 31.2 11 K562 STAT1:S-IFNa30 SRF:M 33 33 70.3 1 K562 STAT1:S-IFNg30 JunD:W 21 11 8.7 1 K562 STAT1:S-IFNg30 YY1:M-v2 22 61 11.1 1 K562 USF1:M YY1:M-v1 82 5 23.9 66 K562 USF1:M YY1:M-v2 122 5 54.2 59 K562 YY1:S SRF:M 21 47 9.2 1 K562 YY1:M-v2 c-Jun:S-IFNg6h 22 5 8.2 1 K562 YY1:M-v2 GATA2:M 57 5 8.6 1 K562 c-Jun:S c-Myc:S 21 6 8.7 1 GM12878 c-Jun:S EBF1:M 49 23 24.7 82 GM12878 c-Jun:S EBF:M 51 7 26.8 80 GM12878 c-Jun:S MEF2A:M 69 12 60.5 119 GM12878 c-Jun:S MEF2C:M 31 13 23.9 61 GM12878 c-Jun:S NFKB:S 49 6 40 114 GM12878 c-Jun:S NFKB:S-TNFa 47 14 38.7 89 GM12878 c-Jun:S PAX5:M-C20 149 3 177 46 GM12878 c-Jun:S POU2F2:M 78 15 64.9 89 GM12878 c-Jun:S PU.1:M 63 5 49.4 61 GM12878 c-Jun:S SRF:M-v1 34 1 33.1 56 GM12878 c-Jun:S TCF12:M 41 6 22.5 59 GM12878 c-Myc:C Egr-1:M-2x 133 2 188.4 2 GM12878 c-Myc:C Egr-1:M-v1 113 2 56.2 2 GM12878 c-Myc:C PAX5:M-C20 686 2 400 7 GM12878 c-Myc:C POU2F2:M 60 7 8.4 1 GM12878 c-Myc:S EBF1:M 55 21 14.3 24 GM12878 c-Myc:S EBF:M 59 21 16.7 29 GM12878 c-Myc:S Egr-1:M-v1 38 3 11.4 1 GM12878 c-Myc:S ELF1:M 44 25 8.1 1 GM12878 c-Myc:S NFKB:S 36 14 12.1 4 GM12878 c-Myc:S PAX5:M-C20 290 3 282 44 GM12878 c-Myc:S POU2F2:M 89 5 41.2 53 GM12878 c-Myc:S TCF12:M 55 10 14.9 37 GM12878 CTCF:B EBF1:M 107 2 55.6 96 GM12878 CTCF:B EBF:M 114 2 61.1 101 GM12878 CTCF:B Egr-1:M-v1 367 5 400 2 GM12878 CTCF:B ELF1:M 215 1 162.1 108 GM12878 CTCF:B MEF2A:M 48 12 27.4 69 GM12878 CTCF:B PAX5:M-C20 167 11 118.6 106 GM12878 CTCF:B POU2F2:M 180 2 137.3 102 GM12878 CTCF:B PU.1:M 40 14 9.1 1 GM12878 CTCF:B SRF:M-v1 36 5 15.9 25 GM12878 CTCF:B TCF12:M 475 3 400 99 GM12878 CTCF:B ZEB1:M 322 5 400 17 GM12878 CTCF:C EBF1:M 143 1 64.2 108 GM12878 CTCF:C EBF:M 160 1 77.6 108 GM12878 CTCF:C Egr-1:M-v1 482 4 400 2 GM12878 CTCF:C ELF1:M 288 0 191.1 104 GM12878 CTCF:C MEF2A:M 62 4 29.5 64 GM12878 CTCF:C PAX5:M-C20 222 10 134.2 104 GM12878 CTCF:C POU2F2:M 220 2 135.2 97 GM12878 CTCF:C PU.1:M 56 32 12 18 GM12878 CTCF:C SRF:M-v1 51 4 20.6 34 GM12878 CTCF:C TCF12:M 110 1 38.7 109 GM12878 CTCF:C YY1:S 24 7 23.5 2 GM12878 CTCF:C ZEB1:M 72 0 19.1 36 GM12878 CTCF:ST EBF1:M 134 1 76.1 99 GM12878 CTCF:ST EBF:M 136 1 76.5 102 GM12878 CTCF:ST Egr-1:M-v1 426 4 400 3 GM12878 CTCF:ST ELF1:M 306 0 251.3 102 GM12878 CTCF:ST MEF2A:M 45 11 22.8 69 GM12878 CTCF:ST PAX5:M-C20 182 7 121.2 105 GM12878 CTCF:ST POU2F2:M 193 10 139 97 GM12878 CTCF:ST PU.1:M 45 16 11.3 7 GM12878 CTCF:ST SRF:M-v1 49 0 25.5 30 GM12878 CTCF:ST TCF12:M 636 2 400 93 GM12878 CTCF:ST ZEB1:M 462 4 400 9 GM12878 EBF1:M CTCF:ST 131 1 73.4 101 GM12878 EBF1:M Egr-1:M-v1 203 0 102.5 51 GM12878 EBF1:M ELF1:M 160 10 31.2 121 GM12878 EBF1:M ETS1:M 55 5 12.2 17 GM12878 EBF1:M JunD:S 23 2 9.1 11 GM12878 EBF1:M Max:S 35 14 10 3 GM12878 EBF1:M MEF2A:M 123 16 42.9 152 GM12878 EBF1:M MEF2C:M 52 10 17.3 59 GM12878 EBF1:M NFKB:S 336 4 271.9 139 GM12878 EBF1:M NFKB:S-TNFa 237 4 247.8 77 GM12878 EBF1:M PAX5:M-C20 268 7 100.6 169 GM12878 EBF1:M POU2F2:M 248 10 84.9 155 GM12878 EBF1:M PU.1:M 244 5 113.5 164 GM12878 EBF1:M SRF:M-v1 82 8 26.2 70 GM12878 EBF1:M TCF12:M 257 16 92.9 163 GM12878 EBF1:M ZEB1:M 92 43 12.4 16 GM12878 EBF:M Egr-1:M-v1 109 1 27.7 61 GM12878 EBF:M ELF1:M 175 8 37.7 121 GM12878 EBF:M ETS1:M 56 5 12.1 22 GM12878 EBF:M Max:S 36 12 10.2 4 GM12878 EBF:M MEF2A:M 130 2 47.8 153 GM12878 EBF:M MEF2C:M 52 23 17.3 65 GM12878 EBF:M NFKB:S 295 4 219.3 144 GM12878 EBF:M NFKB:S-TNFa 222 4 225 99 GM12878 EBF:M PAX5:M-C20 278 0 106.6 164 GM12878 EBF:M POU2F2:M 254 10 87.5 157 GM12878 EBF:M PU.1:M 191 5 69.3 164 GM12878 EBF:M SRF:M-v1 87 2 29.5 71 GM12878 EBF:M TCF12:M 309 1 130.9 161 GM12878 EBF:M ZEB1:M 137 3 36.7 29 GM12878 Egr-1:M-2x PAX5:M-C20 97 0 103.2 3 GM12878 Egr-1:M-v1 ELF1:M 162 4 51.5 85 GM12878 Egr-1:M-v1 ETS1:M 93 2 48.1 24 GM12878 Egr-1:M-v1 GABP:M:HeLa-S3 49 9 24.2 5 GM12878 Egr-1:M-v1 Max:S 23 0 8.5 2 GM12878 Egr-1:M-v1 MEF2A:M 62 10 23.1 82 GM12878 Egr-1:M-v1 MEF2C:M 29 38 9.9 9 GM12878 Egr-1:M-v1 NFKB:S 47 9 13.7 2 GM12878 Egr-1:M-v1 NFKB:S-TNFa 22 9 9.9 1 GM12878 Egr-1:M-v1 PAX5:M-C20 212 6 103.9 87 GM12878 Egr-1:M-v1 POU2F2:M 90 13 15.4 44 GM12878 Egr-1:M-v1 PU.1:M 117 2 54.7 36 GM12878 Egr-1:M-v1 SRF:M-v1 75 4 30.7 58 GM12878 Egr-1:M-v1 TCF12:M 161 3 62.1 70 GM12878 Egr-1:M-v1 USF1:M 61 2 46 1 GM12878 Egr-1:M-v1 ZEB1:M 116 1 37.4 4 GM12878 ELF1:M Egr-1:M-v1 142 4 38.1 86 GM12878 ELF1:M ETS1:M 2648 2 400 54 GM12878 ELF1:M GABP:M:HeLa-S3 600 3 400 60 GM12878 ELF1:M MEF2A:M 86 15 27.6 81 GM12878 ELF1:M NFKB:S 64 3 13.5 7 GM12878 ELF1:M NFKB:S-TNFa 35 4 16 1 GM12878 ELF1:M PAX5:M-C20 266 6 96.3 134 GM12878 ELF1:M POU2F2:M 197 8 50.8 120 GM12878 ELF1:M PU.1:M 4508 2 400 77 GM12878 ELF1:M SRF:M-v1 123 5 55 86 GM12878 ELF1:M TCF12:M 275 2 103.9 135 GM12878 ELF1:M USF1:M 34 9 8.2 1 GM12878 ELF1:M ZEB1:M 193 4 62.9 70 GM12878 ETS1:M c-Jun:S 21 5 21.7 1 GM12878 ETS1:M ELF1:M 2635 2 400 60 GM12878 ETS1:M Max:S 34 34 26.4 1 GM12878 ETS1:M MEF2A:M 58 8 31.2 85 GM12878 ETS1:M MEF2C:M 27 14 12.7 9 GM12878 ETS1:M NFKB:S 35 9 12 10 GM12878 ETS1:M NFKB:S-TNFa 21 2 13.1 1 GM12878 ETS1:M PAX5:M-C20 90 10 34.3 91 GM12878 ETS1:M POU2F2:M 74 15 23.1 72 GM12878 ETS1:M PU.1:M 3272 0 400 8 GM12878 ETS1:M SRF:M-v1 66 17 37.6 76 GM12878 ETS1:M TCF12:M 73 16 22.7 70 GM12878 ETS1:M USF1:M 45 33 37.4 2 GM12878 ETS1:M ZEB1:M 49 14 10.3 2 GM12878 GABP:M:HeLa-S3 PAX5:M-C20 53 3 19.8 26 GM12878 GABP:M:HeLa-S3 PU.1:M 974 1 400 5 GM12878 GABP:M:HeLa-S3 SRF:M-v1 43 6 26.3 48 GM12878 GABP:M:HeLa-S3 TCF12:M 46 2 14.8 1 GM12878 JunD:S EBF:M 24 8 10.2 15 GM12878 JunD:S MEF2A:M 43 13 39.2 96 GM12878 JunD:S MEF2C:M 24 14 21 37 GM12878 JunD:S NFKB:S 32 20 29.2 73 GM12878 JunD:S NFKB:S-TNFa 23 12 17.7 30 GM12878 JunD:S PAX5:M-C20 63 4 68.5 8 GM12878 JunD:S POU2F2:M 38 16 29.5 44 GM12878 JunD:S PU.1:M 23 20 12.5 6 GM12878 JunD:S SRF:M-v1 20 9 18.2 28 GM12878 JunD:S TCF12:M 25 12 13.9 12 GM12878 Max:S c-Jun:S 26 3 19.1 1 GM12878 Max:S PAX5:M-C20 241 0 293.2 10 GM12878 Max:S POU2F2:M 37 17 13 13 GM12878 Max:S TCF12:M 33 44 9.6 2 GM12878 MEF2A:M NFKB:S 102 11 63.2 155 GM12878 MEF2A:M NFKB:S-TNFa 52 11 31.9 108 GM12878 MEF2A:M PAX5:M-C20 139 13 63.5 164 GM12878 MEF2A:M POU2F2:M 183 1 101.6 161 GM12878 MEF2A:M PU.1:M 125 8 66.6 158 GM12878 MEF2A:M SRF:M-v1 90 0 60.4 115 GM12878 MEF2A:M TCF12:M 149 7 72.7 160 GM12878 MEF2A:M ZEB1:M 50 2 10.7 5 GM12878 MEF2C:M NFKB:S 50 11 33.2 96 GM12878 MEF2C:M NFKB:S-TNFa 25 14 13.5 32 GM12878 MEF2C:M PAX5:M-C20 53 7 21.4 73 GM12878 MEF2C:M POU2F2:M 65 12 31.9 95 GM12878 MEF2C:M PU.1:M 37 8 12.8 34 GM12878 MEF2C:M SRF:M-v1 44 0 29.1 70 GM12878 MEF2C:M TCF12:M 58 6 25.9 82 GM12878 NFKB:S MEF2C:M 50 18 33.1 98 GM12878 NFKB:S PAX5:M-C20 99 19 33.1 147 GM12878 NFKB:S POU2F2:M 115 1 46.1 149 GM12878 NFKB:S PU.1:M 122 2 67.1 138 GM12878 NFKB:S SRF:M-v1 47 26 20 66 GM12878 NFKB:S TCF12:M 123 8 53.2 151 GM12878 NFKB:S-TNFa PAX5:M-C20 42 35 15.4 60 GM12878 NFKB:S-TNFa POU2F2:M 50 15 21.9 84 GM12878 NFKB:S-TNFa PU.1:M 98 2 81.7 47 GM12878 NFKB:S-TNFa SRF:M-v1 20 9 8.3 3 GM12878 NFKB:S-TNFa TCF12:M 54 8 26.4 79 GM12878 NRSF:M PAX5:M-C20 26 4 8.8 2 GM12878 NRSF:M TCF12:M 33 5 16.9 1 GM12878 PAX5:M-C20 NRSF:M 28 4 10.8 2 GM12878 PAX5:M-C20 POU2F2:M 339 4 158.9 166 GM12878 PAX5:M-C20 PU.1:M 164 14 56.9 157 GM12878 PAX5:M-C20 SRF:M-v1 130 11 65.5 101 GM12878 PAX5:M-C20 TCF12:M 279 4 110.7 168 GM12878 PAX5:M-C20 USF1:M 549 1 400 5 GM12878 PAX5:M-C20 ZEB1:M 122 19 25.2 84 GM12878 POU2F2:M PAX5:M-C20 335 4 155.5 166 GM12878 POU2F2:M PU.1:M 158 17 52.3 164 GM12878 POU2F2:M SRF:M-v1 102 20 41.2 94 GM12878 POU2F2:M TCF12:M 278 10 111.7 153 GM12878 POU2F2:M ZEB1:M 122 0 26.7 62 GM12878 PU.1:M c-Myc:S 40 26 9.7 3 GM12878 PU.1:M POU2F2:M 161 17 54.5 165 GM12878 PU.1:M SRF:M-2x 25 47 17.6 1 GM12878 PU.1:M SRF:M-v1 102 7 60.3 92 GM12878 PU.1:M TCF12:M 139 25 40.8 152 GM12878 SRF:M-2x PU.1:M 24 47 16 1 GM12878 SRF:M-v1 TCF12:M 95 7 35 90 GM12878 SRF:M-v1 ZEB1:M 55 8 12.7 6 GM12878 TCF12:M SRF:M-v1 96 1 35.8 88 GM12878 TCF12:M ZEB1:M 5405 2 400 26 GM12878 YY1:S CTCF:B 20 8 22.5 1 GM12878 BHLHE40:M c-Myc:C 439 1 400 3 HepG2 BHLHE40:M FOSL2:M 23 20 12.6 5 HepG2 BHLHE40:M FOXA1:M-SC-101058 21 8 9.7 2 HepG2 BHLHE40:M HNF4A:M 20 12 9.1 1 HepG2 BHLHE40:M JunD:M 23 10 11.7 9 HepG2 BHLHE40:M RXRA:M 27 4 20.8 3 HepG2 BHLHE40:M USF1:M 846 0 400 4 HepG2 CEBPB:S-forskolin c-Myc:C 118 0 47.9 106 HepG2 CEBPB:S-forskolin CTCF:B 59 18 30 83 HepG2 CEBPB:S-forskolin CTCF:C 69 7 40.4 87 HepG2 CEBPB:S-forskolin CTCF:M 68 11 36.6 86 HepG2 CEBPB:S-forskolin CTCF:ST 67 8 27.1 78 HepG2 CEBPB:S-forskolin ELF1:M 102 14 36.4 128 HepG2 CEBPB:S-forskolin ERRA:S-forskolin 38 6 25.7 1 HepG2 CEBPB:S-forskolin FOSL2:M 146 11 81.9 124 HepG2 CEBPB:S-forskolin FOXA1:M-SC-101058 419 3 400 179 HepG2 CEBPB:S-forskolin FOXA1:M-SC-6553 406 2 400 179 HepG2 CEBPB:S-forskolin FOXA2:M 443 2 400 184 HepG2 CEBPB:S-forskolin GABP:M 31 6 8.7 1 HepG2 CEBPB:S-forskolin HNF4A:M 176 3 112.4 167 HepG2 CEBPB:S-forskolin HNF4A:S-forskolin 132 3 82.1 155 HepG2 CEBPB:S-forskolin HNF4G:M 130 13 79.6 154 HepG2 CEBPB:S-forskolin HSF1:S-forskolin 41 2 28.6 52 HepG2 CEBPB:S-forskolin JunD:M 163 3 89.9 130 HepG2 CEBPB:S-forskolin RXRA:M 125 26 87.2 143 HepG2 CEBPB:S-forskolin SRF:M 52 7 24.8 57 HepG2 CEBPB:S-forskolin USF1:M 61 11 23.4 67 HepG2 c-Myc:C CEBPB:S-forskolin 118 0 48 112 HepG2 c-Myc:C CTCF:B 120 1 84.3 106 HepG2 c-Myc:C CTCF:C 142 0 110.6 112 HepG2 c-Myc:C CTCF:M 152 4 112.9 103 HepG2 c-Myc:C CTCF:ST 168 1 107.9 97 HepG2 c-Myc:C ELF1:M 126 19 35.4 120 HepG2 c-Myc:C FOSL2:M 154 5 68.4 120 HepG2 c-Myc:C FOXA1:M-SC-101058 127 5 49.7 130 HepG2 c-Myc:C FOXA1:M-SC-6553 123 6 53.1 120 HepG2 c-Myc:C FOXA2:M 157 6 68.7 130 HepG2 c-Myc:C GABP:M 49 15 14.1 14 HepG2 c-Myc:C HNF4A:M 153 7 72.1 146 HepG2 c-Myc:C HNF4A:S-forskolin 147 7 81.8 132 HepG2 c-Myc:C HNF4G:M 138 7 72.9 121 HepG2 c-Myc:C JunD:M 181 6 79.3 118 HepG2 c-Myc:C RXRA:M 120 5 69 123 HepG2 c-Myc:C SRF:M 52 20 17.1 38 HepG2 CTCF:B c-Myc:C 114 1 77.5 105 HepG2 CTCF:B ELF1:M 76 30 39.9 124 HepG2 CTCF:B FOSL2:M 78 12 44.9 82 HepG2 CTCF:B FOXA1:M-SC-101058 53 24 20.8 91 HepG2 CTCF:B FOXA1:M-SC-6553 56 23 24 78 HepG2 CTCF:B FOXA2:M 93 23 53.6 139 HepG2 CTCF:B HNF4A:M 48 6 19.1 39 HepG2 CTCF:B HNF4A:S-forskolin 45 19 21.4 68 HepG2 CTCF:B HNF4G:M 34 6 11.3 2 HepG2 CTCF:B JunD:M 63 12 28.8 70 HepG2 CTCF:B RXRA:M 28 3 9.1 6 HepG2 CTCF:B SRF:M 32 25 17.9 24 HepG2 CTCF:B USF1:M 33 7 11.2 14 HepG2 CTCF:C ELF1:M 85 23 48.7 128 HepG2 CTCF:C FOSL2:M 81 4 47.4 81 HepG2 CTCF:C FOXA1:M-SC-101058 58 41 25.9 88 HepG2 CTCF:C FOXA1:M-SC-6553 58 40 27 82 HepG2 CTCF:C FOXA2:M 102 5 64.5 138 HepG2 CTCF:C HNF4A:M 50 32 21.1 54 HepG2 CTCF:C HNF4A:S-forskolin 49 18 25.4 72 HepG2 CTCF:C HNF4G:M 34 36 11.6 8 HepG2 CTCF:C JunD:M 71 2 35.9 79 HepG2 CTCF:C RXRA:M 35 4 15.8 8 HepG2 CTCF:C SRF:M 33 24 18.4 36 HepG2 CTCF:C USF1:M 41 21 18.5 17 HepG2 CTCF:M ELF1:M 93 19 51.8 131 HepG2 CTCF:M FOSL2:M 85 7 47.7 83 HepG2 CTCF:M FOXA1:M-SC-101058 63 62 28.5 94 HepG2 CTCF:M FOXA1:M-SC-6553 60 18 28.2 87 HepG2 CTCF:M FOXA2:M 102 11 63 127 HepG2 CTCF:M HNF4A:M 54 11 22.8 79 HepG2 CTCF:M HNF4A:S-forskolin 49 14 23.4 77 HepG2 CTCF:M HNF4G:M 36 11 12 8 HepG2 CTCF:M JunD:M 75 3 35.3 81 HepG2 CTCF:M RXRA:M 38 2 17.5 20 HepG2 CTCF:M SRF:M 39 13 22.8 40 HepG2 CTCF:M USF1:M 40 17 14.9 22 HepG2 CTCF:ST ELF1:M 88 22 35.2 111 HepG2 CTCF:ST FOSL2:M 87 1 37.8 72 HepG2 CTCF:ST FOXA1:M-SC-101058 57 26 16.7 63 HepG2 CTCF:ST FOXA1:M-SC-6553 58 25 19.6 58 HepG2 CTCF:ST FOXA2:M 93 3 41.8 123 HepG2 CTCF:ST HNF4A:M 52 26 14 30 HepG2 CTCF:ST HNF4A:S-forskolin 50 13 17.6 50 HepG2 CTCF:ST HNF4G:M 37 35 8.2 1 HepG2 CTCF:ST JunD:M 80 19 29.8 66 HepG2 CTCF:ST RXRA:M 34 15 9 1 HepG2 CTCF:ST SRF:M 31 17 11.3 21 HepG2 CTCF:ST USF1:M 39 8 10.1 9 HepG2 ELF1:M CTCF:ST 83 29 31.1 110 HepG2 ELF1:M FOSL2:M 131 5 50.9 139 HepG2 ELF1:M FOXA1:M-SC-101058 193 15 110.3 152 HepG2 ELF1:M FOXA1:M-SC-6553 186 4 113.3 140 HepG2 ELF1:M FOXA2:M 203 4 111.6 151 HepG2 ELF1:M GABP:M 2299 2 400 64 HepG2 ELF1:M HNF4A:M 193 0 113.9 162 HepG2 ELF1:M HNF4A:S-forskolin 143 0 80.4 123 HepG2 ELF1:M HNF4G:M 171 0 107.7 132 HepG2 ELF1:M HSF1:S-forskolin 28 1 10.9 2 HepG2 ELF1:M JunD:M 167 7 69.8 140 HepG2 ELF1:M RXRA:M 115 3 65.8 124 HepG2 ELF1:M SRF:M 79 6 41.3 77 HepG2 ELF1:M USF1:M 73 12 24.4 61 HepG2 ERRA:S-forskolin FOXA1:M-SC-101058 22 3 8.3 1 HepG2 ERRA:S-forskolin FOXA1:M-SC-6553 21 2 9 1 HepG2 ERRA:S-forskolin FOXA2:M 26 2 11.8 1 HepG2 ERRA:S-forskolin HNF4A:M 146 3 192.4 29 HepG2 ERRA:S-forskolin HNF4A:S-forskolin 36 4 24.4 37 HepG2 ERRA:S-forskolin HNF4G:M 37 9 27.4 9 HepG2 ERRA:S-forskolin JunD:M 26 10 9.3 1 HepG2 ERRA:S-forskolin RXRA:M 1229 0 400 2 HepG2 ERRA:S-forskolin USF1:M 77 5 88.9 1 HepG2 FOSL2:M FOXA1:M-SC-101058 314 4 237.5 178 HepG2 FOSL2:M FOXA1:M-SC-6553 302 3 237.3 181 HepG2 FOSL2:M FOXA2:M 311 3 227.9 174 HepG2 FOSL2:M GABP:M 52 19 23.1 59 HepG2 FOSL2:M HNF4A:M 189 1 114.7 163 HepG2 FOSL2:M HNF4A:S-forskolin 132 20 77.8 137 HepG2 FOSL2:M HNF4G:M 135 6 78.7 138 HepG2 FOSL2:M HSF1:S-forskolin 25 2 9.8 6 HepG2 FOSL2:M RXRA:M 133 9 86.5 161 HepG2 FOSL2:M SRF:M 57 0 24.8 69 HepG2 FOSL2:M USF1:M 156 6 109.4 90 HepG2 FOXA1:M-SC-101058 FOSL2:M 318 4 242.3 178 HepG2 FOXA1:M-SC-101058 HNF4A:M 341 5 267.2 200 HepG2 FOXA1:M-SC-101058 HNF4A:S-forskolin 208 5 155.7 190 HepG2 FOXA1:M-SC-101058 HNF4G:M 281 5 231.5 193 HepG2 FOXA1:M-SC-101058 HSF1:S-forskolin 25 18 10.3 4 HepG2 FOXA1:M-SC-101058 JunD:M 351 4 273.1 182 HepG2 FOXA1:M-SC-101058 RXRA:M 332 3 400 196 HepG2 FOXA1:M-SC-101058 SRF:M 81 1 51.2 70 HepG2 FOXA1:M-SC-101058 USF1:M 82 12 36.4 82 HepG2 FOXA1:M-SC-6553 BHLHE40:M 20 7 9.6 1 HepG2 FOXA1:M-SC-6553 HNF4A:M 353 4 285.8 200 HepG2 FOXA1:M-SC-6553 HNF4A:S-forskolin 195 4 145.3 184 HepG2 FOXA1:M-SC-6553 HNF4G:M 287 4 242 192 HepG2 FOXA1:M-SC-6553 JunD:M 297 3 226.5 175 HepG2 FOXA1:M-SC-6553 RXRA:M 299 2 280.2 197 HepG2 FOXA1:M-SC-6553 SRF:M 72 2 45.1 59 HepG2 FOXA1:M-SC-6553 USF1:M 74 13 32.7 67 HepG2 FOXA2:M BHLHE40:M 22 7 10.8 1 HepG2 FOXA2:M GABP:M 37 2 14 5 HepG2 FOXA2:M HNF4A:M 374 4 289.1 198 HepG2 FOXA2:M HNF4A:S-forskolin 223 4 161.8 184 HepG2 FOXA2:M HNF4G:M 316 4 256.5 189 HepG2 FOXA2:M JunD:M 332 3 244 166 HepG2 FOXA2:M RXRA:M 294 2 259.5 194 HepG2 FOXA2:M SRF:M 93 2 60.4 80 HepG2 FOXA2:M USF1:M 80 12 33 69 HepG2 GABP:M FOXA2:M 34 2 11.5 5 HepG2 GABP:M HNF4A:M 34 30 12.2 5 HepG2 GABP:M HNF4G:M 29 6 10.1 1 HepG2 GABP:M JunD:M 51 5 17.6 33 HepG2 GABP:M SRF:M 34 12 16.4 30 HepG2 GABP:M USF1:M 32 14 11.8 6 HepG2 HNF4A:M GABP:M 30 30 8.7 6 HepG2 HNF4A:M HSF1:S-forskolin 26 3 11.5 8 HepG2 HNF4A:M JunD:M 219 11 136.9 163 HepG2 HNF4A:M RXRA:M 2016 3 400 187 HepG2 HNF4A:M SRF:M 57 9 28.5 83 HepG2 HNF4A:M USF1:M 85 8 40.7 107 HepG2 HNF4A:S-forskolin HSF1:S-forskolin 26 5 13.8 10 HepG2 HNF4A:S-forskolin JunD:M 148 10 86.1 140 HepG2 HNF4A:S-forskolin RXRA:M 599 3 400 173 HepG2 HNF4A:S-forskolin SRF:M 46 9 22.3 54 HepG2 HNF4A:S-forskolin USF1:M 51 26 18.7 70 HepG2 HNF4G:M HSF1:S-forskolin 23 8 10.9 4 HepG2 HNF4G:M JunD:M 167 5 104.1 136 HepG2 HNF4G:M RXRA:M 806 3 400 169 HepG2 HNF4G:M SRF:M 52 6 27.2 64 HepG2 HNF4G:M USF1:M 59 7 24.6 49 HepG2 HSF1:S-forskolin FOXA1:M-SC-6553 22 12 8.1 1 HepG2 HSF1:S-forskolin HNF4G:M 21 8 8.8 3 HepG2 HSF1:S-forskolin JunD:M 26 7 9.3 5 HepG2 JunD:M HSF1:S-forskolin 27 7 10.4 5 HepG2 JunD:M RXRA:M 144 15 92.7 160 HepG2 JunD:M SRF:M 70 3 33.4 78 HepG2 JunD:M USF1:M 145 6 90 90 HepG2 RXRA:M SRF:M 54 5 34.8 43 HepG2 RXRA:M USF1:M 272 5 317.2 48 HepG2 SRF:M USF1:M 32 0 11.1 12 HepG2 USF1:M SRF:M 32 4 11.2 12 HepG2 CTCF:B Egr-1:M 352 5 400 3 H1 CTCF:B JunD:Myers 115 1 69.8 102 H1 CTCF:B NRSF:M 44 24 21.9 39 H1 CTCF:B NRSF:M-v2 44 24 21.9 39 H1 CTCF:B RXRA:M 22 2 12.1 13 H1 CTCF:B SRF:M 21 10 9.1 2 H1 CTCF:B USF1:M 51 27 18.9 87 H1 CTCF:B YY1:M 1070 8 400 182 H1 CTCF:M Egr-1:M 649 0 400 7 H1 CTCF:M JunD:Myers 139 10 68 102 H1 CTCF:M NRSF:M 53 3 22.5 38 H1 CTCF:M NRSF:M-v2 53 3 22.5 38 H1 CTCF:M RXRA:M 27 3 13.6 10 H1 CTCF:M SRF:M 30 1 14.2 12 H1 CTCF:M USF1:M 64 7 22.2 70 H1 CTCF:M YY1:M 362 4 264.2 178 H1 Egr-1:M CTCF:M 649 0 400 7 H1 Egr-1:M JunD:Myers 70 25 24.6 60 H1 Egr-1:M USF1:M 51 3 24.2 3 H1 Egr-1:M YY1:M 69 5 16.6 22 H1 JunD:Myers Egr-1:M 60 2 17.1 55 H1 JunD:Myers NRSF:M 61 7 19.8 53 H1 JunD:Myers NRSF:M-v2 61 7 19.8 53 H1 JunD:Myers POU5F1:M 29 20 16.6 37 H1 JunD:Myers RXRA:M 32 7 14.6 21 H1 JunD:Myers SRF:M 34 5 12.9 15 H1 JunD:Myers USF1:M 87 4 31.9 45 H1 JunD:Myers YY1:M 209 6 75.7 118 H1 NRSF:M JunD:Myers 63 7 21.2 51 H1 NRSF:M YY1:M 72 4 20 55 H1 NRSF:M-v2 YY1:M 72 4 20 55 H1 POU5F1:M YY1:M 57 12 37.5 30 H1 RXRA:M USF1:M 193 5 298.4 3 H1 RXRA:M YY1:M 34 7 11.8 3 H1 SRF:M YY1:M 53 47 26.1 11 H1 USF1:M SRF:M 22 12 8.4 1 H1 USF1:M YY1:M 169 4 84.3 57 H1 YY1:M USF1:M 209 4 122.6 53 H1 AP-2alpha:S c-Fos:S 75 3 46.1 86 HeLa-S3 AP-2alpha:S c-Jun:S 49 3 22.5 38 HeLa-S3 AP-2alpha:S c-Myc:S 69 6 24.3 113 HeLa-S3 AP-2alpha:S CTCF:ST 53 1 31.8 2 HeLa-S3 AP-2alpha:S GABP:M:GM12878 39 4 12.7 1 HeLa-S3 AP-2alpha:S JunD:S 84 3 39.5 91 HeLa-S3 AP-2alpha:S Max:S 85 8 29.5 107 HeLa-S3 AP-2alpha:S STAT1:S-IFNg30 47 13 17.1 25 HeLa-S3 AP-2gamma:S c-Fos:S 86 3 51.2 104 HeLa-S3 AP-2gamma:S c-Jun:S 63 3 31.4 59 HeLa-S3 AP-2gamma:S c-Myc:S 91 20 33.3 127 HeLa-S3 AP-2gamma:S CTCF:B 40 3 12.6 1 HeLa-S3 AP-2gamma:S CTCF:C 44 2 9.4 5 HeLa-S3 AP-2gamma:S CTCF:ST 77 1 50 2 HeLa-S3 AP-2gamma:S GABP:M:GM12878 42 4 10.2 1 HeLa-S3 AP-2gamma:S JunD:S 88 3 35.5 111 HeLa-S3 AP-2gamma:S Max:S 112 13 41.1 128 HeLa-S3 AP-2gamma:S STAT1:S-IFNg30 72 0 33.9 49 HeLa-S3 c-Fos:S AP-2gamma:S 136 3 108.1 106 HeLa-S3 c-Fos:S c-Myc:C 53 6 34.5 69 HeLa-S3 c-Fos:S c-Myc:S 152 15 129.8 170 HeLa-S3 c-Fos:S CTCF:C 30 1 10.1 2 HeLa-S3 c-Fos:S GABP:M:GM12878 35 9 20.7 20 HeLa-S3 c-Fos:S Max:S 210 3 179 187 HeLa-S3 c-Fos:S NRSF:M 23 2 8.6 3 HeLa-S3 c-Fos:S STAT1:S-IFNg30 61 23 31.6 129 HeLa-S3 c-Jun:S c-Myc:C 46 6 28.2 31 HeLa-S3 c-Jun:S c-Myc:S 113 15 90.2 157 HeLa-S3 c-Jun:S GABP:M:GM12878 34 9 21.8 19 HeLa-S3 c-Jun:S Max:S 154 3 122.8 165 HeLa-S3 c-Jun:S NRSF:M 39 12 27.7 9 HeLa-S3 c-Jun:S STAT1:S-IFNg30 47 9 22 79 HeLa-S3 c-Myc:C AP-2gamma:S 38 6 8.1 1 HeLa-S3 c-Myc:C c-Jun:S 59 3 43.5 27 HeLa-S3 c-Myc:C JunD:S 100 3 71.7 73 HeLa-S3 c-Myc:C Nrf1:S 121 0 163.6 2 HeLa-S3 c-Myc:S CTCF:B 153 2 138.4 96 HeLa-S3 c-Myc:S CTCF:C 183 1 151.3 110 HeLa-S3 c-Myc:S CTCF:ST 201 0 218.5 97 HeLa-S3 c-Myc:S GABP:M:GM12878 58 12 17.7 78 HeLa-S3 c-Myc:S JunD:S 182 6 130.9 176 HeLa-S3 c-Myc:S NRSF:M 45 23 13.4 49 HeLa-S3 c-Myc:S STAT1:S-IFNg30 90 0 47.3 139 HeLa-S3 CTCF:B c-Fos:S 27 11 11.5 1 HeLa-S3 CTCF:B c-Myc:S 163 2 152 93 HeLa-S3 CTCF:B JunD:S 95 13 67.9 102 HeLa-S3 CTCF:B Max:S 128 7 92.3 109 HeLa-S3 CTCF:B STAT1:S-IFNg30 42 4 22.2 56 HeLa-S3 CTCF:C JunD:S 111 8 74.2 117 HeLa-S3 CTCF:C Max:S 167 11 115.4 119 HeLa-S3 CTCF:C NRSF:M 37 1 10.9 2 HeLa-S3 CTCF:C STAT1:S-IFNg30 42 28 16.6 73 HeLa-S3 CTCF:ST c-Fos:S 23 9 10.6 1 HeLa-S3 CTCF:ST JunD:S 98 16 82.2 97 HeLa-S3 CTCF:ST Max:S 139 2 114.5 108 HeLa-S3 CTCF:ST NRSF:M 30 4 10.6 3 HeLa-S3 CTCF:ST STAT1:S-IFNg30 36 27 18.8 64 HeLa-S3 GABP:M:GM12878 CTCF:C 41 2 10.1 1 HeLa-S3 GABP:M:GM12878 JunD:S 57 5 28.5 50 HeLa-S3 GABP:M:GM12878 Max:S 69 12 21.7 73 HeLa-S3 GABP:M:GM12878 NRSF:M 38 4 9.1 3 HeLa-S3 GABP:M:GM12878 STAT1:S-IFNg30 218 4 267.9 2 HeLa-S3 JunD:S GABP:M:GM12878 56 5 27.4 55 HeLa-S3 JunD:S Max:S 245 6 175.4 187 HeLa-S3 JunD:S NRSF:M 50 12 24.2 15 HeLa-S3 JunD:S STAT1:S-IFNg30 72 10 32.3 133 HeLa-S3 Max:S JunD:S 313 6 256.5 184 HeLa-S3 Max:S Nrf1:S 203 0 265.6 3 HeLa-S3 Max:S NRSF:M 58 1 18.9 39 HeLa-S3 Max:S STAT1:S-IFNg30 87 6 36.4 136 HeLa-S3 Nrf1:S c-Myc:S 25 5 8.9 1 HeLa-S3 Nrf1:S Max:S 203 0 265.8 2 HeLa-S3 STAT1:S-IFNg30 c-Myc:C 31 19 8.7 1 HeLa-S3