ClusterID GO process P-value Q-value Total Annotated ClusterSize AnnotatedInCluster FoldEnrichment Hitgenes Cluster1 ncRNA metabolic process 7.81324e-12 1.56499e-08 3593 34 935 28 3.16464 ADAT3;AIMP2;ALKBH8;BOP1;CARS;DARS2;EMG1;EXOSC5;GEMIN7;HENMT1;IARS;ISG20;MARS;METTL1;NOP58;NSUN2;PUS1;PUS7;QTRTD1;RPP25;RRP9;TARS;TRMT6;UTP14A;UTP20;WARS;WDR4;WDR77 Cluster1 ribonucleoprotein complex biogenesis 1.01359e-08 6.76743e-06 3593 19 935 17 3.43828 BOP1;EBNA1BP2;EMG1;EXOSC5;GEMIN7;GRB7;ISG20;MRTO4;MTG1;NOP58;RRP9;RRS1;SHQ1;TSR1;UTP14A;UTP20;WDR77 Cluster1 tRNA metabolic process 1.01359e-08 6.76743e-06 3593 19 935 17 3.43828 ADAT3;AIMP2;ALKBH8;CARS;DARS2;IARS;MARS;METTL1;NSUN2;PUS1;PUS7;QTRTD1;RPP25;TARS;TRMT6;WARS;WDR4 Cluster1 cellular component biogenesis at cellular level 5.12144e-08 2.56456e-05 3593 20 935 17 3.26636 BOP1;EBNA1BP2;EMG1;EXOSC5;GEMIN7;GRB7;ISG20;MRTO4;MTG1;NOP58;RRP9;RRS1;SHQ1;TSR1;UTP14A;UTP20;WDR77 Cluster1 ncRNA processing 2.22202e-07 8.38712e-05 3593 23 935 18 3.00739 ADAT3;ALKBH8;BOP1;EMG1;EXOSC5;ISG20;METTL1;NOP58;NSUN2;PUS1;PUS7;QTRTD1;RPP25;RRP9;TRMT6;UTP14A;UTP20;WDR4 Cluster1 ribosome biogenesis 2.51237e-07 8.38712e-05 3593 14 935 13 3.5683 BOP1;EBNA1BP2;EMG1;EXOSC5;ISG20;MRTO4;MTG1;NOP58;RRP9;RRS1;TSR1;UTP14A;UTP20 Cluster1 cellular amino acid metabolic process 5.893e-07 0.000168624 3593 95 935 47 1.90117 AASS;AGMAT;AGXT2L1;AIMP2;ASNS;ASS1;CARS;CBS;CHDH;CKMT1B;CNDP2;DARS2;DDAH1;DNMT3B;EIF5A;GCNT4;GFPT2;GGTLC2;GLS2;GPX3;HAAO;HPDL;IARS;IDH1;IDO1;MARS;MAT1A;MGST1;MME;MTHFD1;PADI2;PADI4;PAH;PFAS;PIPOX;PLSCR1;PPCDC;PSAT1;SLC22A4;SLC25A10;SLC5A6;SLC7A5;SLC7A7;SMS;TARS;TPH2;WARS Cluster1 RNA processing 3.14983e-06 0.000788639 3593 59 935 32 2.08422 ADAD2;ADAT3;ALKBH8;BOP1;C2orf65;EMG1;ESRP1;ESRP2;EXOSC5;GEMIN7;HNRNPM;ISG20;LARP7;METTL1;MRM1;NOP58;NSUN2;PUS1;PUS7;QTRTD1;RBFOX3;RPP25;RRP9;SRSF2;SRSF3;TRMT6;TTF2;UTP14A;UTP20;WDR4;WDR77;ZNF326 Cluster1 cellular ketone metabolic process 1.72996e-05 0.00385013 3593 186 935 74 1.52885 AASS;ACOT11;ACOT4;ACOXL;ACSBG1;ACSL1;AGMAT;AGXT2L1;AIMP2;ALOX15;ASNS;ASS1;CARS;CBR1;CBS;CHDH;CKMT1B;CNDP2;CYB5A;CYP2J2;DARS2;DDAH1;DNMT3B;EIF5A;FA2H;FAAH;FADS3;FADS6;GCNT4;GFPT2;GGTLC2;GLS2;GPX3;GSTO2;HAAO;HPDL;HPGD;IARS;IDH1;IDO1;MARS;MAT1A;ME1;MGST1;MME;MTHFD1;MTHFD1L;NR5A2;PADI2;PADI4;PAH;PCK2;PDSS1;PFAS;PIPOX;PKLR;PLA2G4C;PLSCR1;PPCDC;PSAT1;RDH10;SLC22A4;SLC25A10;SLC27A3;SLC27A6;SLC5A6;SLC7A5;SLC7A7;SMS;SYK;TARS;TPH2;UGP2;WARS Cluster1 organic acid metabolic process 2.15839e-05 0.00417035 3593 187 935 74 1.52067 AASS;ACOT11;ACOT4;ACOXL;ACSBG1;ACSL1;AGMAT;AGXT2L1;AIMP2;ALOX15;ASNS;ASS1;CARS;CBS;CHDH;CKMT1B;CNDP2;CYB5A;CYP2J2;DARS2;DDAH1;DNMT3B;EIF5A;FA2H;FAAH;FADS3;FADS6;GCNT4;GFPT2;GGTLC2;GLS2;GPX3;GSTO2;HAAO;HPDL;HPGD;IARS;IDH1;IDO1;LRRC16A;MARS;MAT1A;ME1;MGST1;MME;MTHFD1;MTHFD1L;NR5A2;PADI2;PADI4;PAH;PCK2;PFAS;PIPOX;PKLR;PLA2G4C;PLSCR1;PPCDC;PSAT1;RDH10;SLC22A4;SLC25A10;SLC27A3;SLC27A6;SLC2A9;SLC5A6;SLC7A5;SLC7A7;SMS;SYK;TARS;TPH2;UGP2;WARS Cluster1 metabolic process 2.67767e-05 0.00417035 3593 1704 935 497 1.12081 AASS;ABCG1;ABI3;ABP1;ACAP1;ACE;ACOT11;ACOT4;ACOXL;ACP5;ACSBG1;ACSL1;ACTL6B;ADAD2;ADAMTS14;ADAMTS16;ADAMTS17;ADAMTS19;ADAMTS5;ADAMTS8;ADAT3;ADM2;ADPRH;ADPRHL1;AFP;AGMAT;AGPAT9;AGXT2L1;AHR;AIFM2;AIMP2;AK4;ALDH1L1;ALKBH8;ALOX15;ALPPL2;AMBP;AMDHD2;AMPD3;APOE;ARHGAP22;ASNS;ASPHD1;ASS1;ATF5;ATP12A;B3GALT1;B3GALT5;B3GNT3;B3GNT7;BACE2;BCL11A;BCOR;BLM;BNC2;BOP1;C1GALT1;C1S;C2orf65;CA7;CA8;CACNA1D;CALCA;CALR3;CAPN13;CARS;CBLC;CBR1;CBS;CCNE1;CCRN4L;CD24;CD3EAP;CD44;CDC42BPG;CDC6;CDCA7;CDH1;CDS1;CDX4;CEBPB;CES1;CFTR;CHCHD4;CHDH;CHRM1;CHST13;CHST15;CHST4;CHST7;CHST8;CHST9;CKMT1B;CLN6;CNDP2;CPN1;CPZ;CR2;CSTA;CTSC;CTSH;CUX2;CXCR2;CYB5A;CYP1B1;CYP27B1;CYP2A13;CYP2J2;CYP2S1;DARS2;DCLK1;DDAH1;DDIT3;DERL3;DGKK;DHRS2;DHRS3;DMRT1;DNAJA4;DNAJC22;DNAJC30;DNMT3B;DOLK;DPF1;DPH2;DPP4;DSCC1;DUSP13;DUSP2;E2F8;EAF2;ECEL1;EEFSEC;EIF4EBP1;EIF5A;ELF4;ELL3;EME2;EMG1;ENPP1;ENTPD3;EPAS1;EPHA1;EPHA8;EPHX1;ERG;ESRP1;ESRP2;ETV4;EXOSC5;FA2H;FAAH;FABP5;FADS3;FADS6;FAM54A;FANCA;FASTKD5;FBP1;FBXL21;FBXL6;FBXO2;FGF2;FHL2;FLT1;FOSL1;FOXH1;FOXL2;FOXO1;FUT1;G0S2;GALNT14;GALNT6;GATA2;GATA6;GCHFR;GCNT4;GEMIN7;GFPT2;GGTLC2;GHRL;GINS4;GLB1L3;GLS2;GMDS;GMPPB;GNA14;GNAO1;GNG3;GNGT2;GPX3;GRHL2;GRM4;GSTO2;HAAO;HELLS;HENMT1;HERC5;HERC6;HIST1H2BJ;HMGN5;HMOX1;HMX1;HMX2;HNF4G;HNRNPM;HPDL;HPGD;HPSE;HRASLS;HSD11B2;HSPA8;HTR1B;IARS;IDH1;IDO1;IKBKE;IL12RB2;INHBA;IRF6;ISG20;ITGB1BP3;ITIH5;ITPA;ITPR2;ITPR3;KDR;KIAA1161;KLK13;KLK5;KLKB1;KRT7;LARP7;LCK;LDHC;LDLRAP1;LECT1;LHX4;LHX6;LHX8;LMCD1;LPA;LPAR3;LPCAT3;LRAT;LRRC16A;LTF;LYSMD2;MACC1;MAP3K5;MAP7;MARC1;MARC2;MARCH3;MARS;MAT1A;MATK;MBOAT1;MCM3;MCM4;MCM5;ME1;MEF2B;MESP2;MET;METTL1;MGST1;MIPEP;MLXIPL;MME;MMP14;MMP24;MMP25;MOCOS;MPV17L;MRM1;MTG1;MTHFD1;MTHFD1L;MUC4;MX2;MYBBP1A;MYBL2;MYLIP;MYO3A;MYOCD;NAGPA;NAP1L3;NAT1;NCLN;NDUFC2-KCTD14;NEURL2;NFIB;NGF;NLN;NME1;NMI;NMNAT2;NOP58;NOTO;NOXO1;NR2E3;NR5A2;NSUN2;NT5E;OGDHL;OTUD7A;OVOL2;PACSIN1;PADI2;PADI4;PAH;PAPSS2;PCBD2;PCK2;PCNA;PCSK1N;PDE2A;PDE6G;PDF;PDSS1;PDZRN3;PFAS;PFKP;PHF11;PHF15;PHLDA1;PID1;PIGW;PIM2;PINX1;PIPOX;PKLR;PKMYT1;PLA2G4C;PLA2G7;PLCL2;PLSCR1;PMAIP1;PMM2;PNPLA5;POLA1;POLE2;POLR1A;POLR3B;POLR3G;POU2F3;POU5F1;PPAP2C;PPARGC1B;PPCDC;PPIC;PPM1J;PPP1R17;PPP1R1B;PPP1R3B;PPP1R3D;PRDM14;PRKCQ;PRSS16;PRSS8;PSAT1;PSMB10;PSMB8;PSME3;PSPC1;PTPN6;PTPRB;PUS1;PUS7;PYCARD;QTRTD1;RAMP3;RARRES2;RASD2;RASL11A;RBFOX3;RDH10;RDH12;REXO2;RHBDF2;RHBDL3;RHOD;RIPK1;RNASEH2B;RNF144B;RPP25;RRM2;RRP9;RTEL1;RUNX1T1;RUNX2;SEC24D;SEPHS1;SFTPD;SGK1;SGK3;SLC22A4;SLC25A10;SLC25A12;SLC25A13;SLC27A3;SLC27A6;SLC2A9;SLC3A2;SLC5A6;SLC7A5;SLC7A7;SLTM;SMPDL3B;SMS;SNAI3;SNCB;SOCS2;SP110;SPIB;SPPL2A;SQSTM1;SRPK3;SRSF2;SRSF3;ST14;STAMBPL1;STEAP1;STEAP2;SYK;SYNJ2;TAF4B;TARS;TBX10;TCF15;TCF19;TDGF1;TDRD5;TEAD4;TEK;TERT;TFR2;TGFB1I1;TIPIN;TK1;TLE2;TMPRSS11E;TMPRSS2;TMPRSS3;TMPRSS4;TNFSF11;TNIK;TNK1;TNNT2;TOMM40;TP53I3;TP73;TPH2;TRIB3;TRIM22;TRIML2;TRMT6;TSSK1B;TTF2;TUBA4A;UBTF;UCHL1;UFD1L;UGP2;UGT8;UNG;UPP1;USP18;USP28;USP43;USP44;UTP14A;UTP20;VRTN;WARS;WDR4;WDR77;WNK2;WWC1;YBX2;YDJC;ZBTB42;ZFP42;ZFP57;ZIC3;ZNF114;ZNF165;ZNF239;ZNF326;ZNF488;ZNF552;ZNF560;ZNF597;ZNF765;ZNF782;ZSCAN10 Cluster1 carboxylic acid metabolic process 2.83364e-05 0.00417035 3593 182 935 72 1.52022 AASS;ACOT11;ACOT4;ACOXL;ACSBG1;ACSL1;AGMAT;AGXT2L1;AIMP2;ALOX15;ASNS;ASS1;CARS;CBS;CHDH;CKMT1B;CNDP2;CYB5A;CYP2J2;DARS2;DDAH1;DNMT3B;EIF5A;FA2H;FAAH;FADS3;FADS6;GCNT4;GFPT2;GGTLC2;GLS2;GPX3;GSTO2;HAAO;HPDL;HPGD;IARS;IDH1;IDO1;MARS;MAT1A;ME1;MGST1;MME;MTHFD1;MTHFD1L;NR5A2;PADI2;PADI4;PAH;PCK2;PFAS;PIPOX;PKLR;PLA2G4C;PLSCR1;PPCDC;PSAT1;RDH10;SLC22A4;SLC25A10;SLC27A3;SLC27A6;SLC5A6;SLC7A5;SLC7A7;SMS;SYK;TARS;TPH2;UGP2;WARS Cluster1 oxoacid metabolic process 2.83364e-05 0.00417035 3593 182 935 72 1.52022 AASS;ACOT11;ACOT4;ACOXL;ACSBG1;ACSL1;AGMAT;AGXT2L1;AIMP2;ALOX15;ASNS;ASS1;CARS;CBS;CHDH;CKMT1B;CNDP2;CYB5A;CYP2J2;DARS2;DDAH1;DNMT3B;EIF5A;FA2H;FAAH;FADS3;FADS6;GCNT4;GFPT2;GGTLC2;GLS2;GPX3;GSTO2;HAAO;HPDL;HPGD;IARS;IDH1;IDO1;MARS;MAT1A;ME1;MGST1;MME;MTHFD1;MTHFD1L;NR5A2;PADI2;PADI4;PAH;PCK2;PFAS;PIPOX;PKLR;PLA2G4C;PLSCR1;PPCDC;PSAT1;RDH10;SLC22A4;SLC25A10;SLC27A3;SLC27A6;SLC5A6;SLC7A5;SLC7A7;SMS;SYK;TARS;TPH2;UGP2;WARS Cluster1 cofactor metabolic process 2.91487e-05 0.00417035 3593 43 935 24 2.14481 AASS;ACOT4;ACSL1;ALDH1L1;AMBP;CBR1;HAAO;HMOX1;IDH1;ITGB1BP3;MAT1A;ME1;MOCOS;MTHFD1;MTHFD1L;NMNAT2;OGDHL;PAH;PCBD2;PDSS1;PIPOX;PPCDC;SLC5A6;TP53I3 Cluster1 M/G1 transition of mitotic cell cycle 4.08161e-05 0.00543902 3593 10 935 9 3.4585 CDC6;MCM3;MCM4;MCM5;POLA1;POLE2;PSMB10;PSMB8;PSME3 Cluster1 ubiquitin-dependent protein catabolic process 4.3447e-05 0.00543902 3593 29 935 18 2.38517 CBLC;DERL3;FBXO2;HERC5;HERC6;MYLIP;PSMB10;PSMB8;PSME3;RNF144B;SQSTM1;TGFB1I1;UCHL1;UFD1L;USP18;USP28;USP43;USP44 Cluster1 tRNA processing 5.3154e-05 0.0062628 3593 12 935 10 3.20232 ADAT3;ALKBH8;METTL1;NSUN2;PUS1;PUS7;QTRTD1;RPP25;TRMT6;WDR4 Cluster1 coenzyme metabolic process 6.63532e-05 0.00718031 3593 37 935 21 2.18104 AASS;ACOT4;ACSL1;ALDH1L1;HAAO;IDH1;ITGB1BP3;MAT1A;ME1;MOCOS;MTHFD1;MTHFD1L;NMNAT2;OGDHL;PAH;PCBD2;PDSS1;PIPOX;PPCDC;SLC5A6;TP53I3 Cluster1 amino acid activation 7.94774e-05 0.00718031 3593 7 935 7 3.84278 AIMP2;CARS;DARS2;IARS;MARS;TARS;WARS Cluster1 tRNA aminoacylation 7.94774e-05 0.00718031 3593 7 935 7 3.84278 AIMP2;CARS;DARS2;IARS;MARS;TARS;WARS Cluster1 tRNA aminoacylation for protein translation 7.94774e-05 0.00718031 3593 7 935 7 3.84278 AIMP2;CARS;DARS2;IARS;MARS;TARS;WARS Cluster1 modification-dependent macromolecule catabolic process 8.24499e-05 0.00718031 3593 30 935 18 2.30567 CBLC;DERL3;FBXO2;HERC5;HERC6;MYLIP;PSMB10;PSMB8;PSME3;RNF144B;SQSTM1;TGFB1I1;UCHL1;UFD1L;USP18;USP28;USP43;USP44 Cluster1 modification-dependent protein catabolic process 8.24499e-05 0.00718031 3593 30 935 18 2.30567 CBLC;DERL3;FBXO2;HERC5;HERC6;MYLIP;PSMB10;PSMB8;PSME3;RNF144B;SQSTM1;TGFB1I1;UCHL1;UFD1L;USP18;USP28;USP43;USP44 Cluster1 proteolysis involved in cellular protein catabolic process 0.000114125 0.00952466 3593 33 935 19 2.21251 CBLC;DERL3;FBXO2;HERC5;HERC6;MYLIP;PMAIP1;PSMB10;PSMB8;PSME3;RNF144B;SQSTM1;TGFB1I1;UCHL1;UFD1L;USP18;USP28;USP43;USP44 Cluster1 RNA modification 0.000142561 0.0105759 3593 9 935 8 3.41581 ALKBH8;HENMT1;METTL1;NSUN2;PUS1;PUS7;QTRTD1;WDR4 Cluster1 rRNA metabolic process 0.000142561 0.0105759 3593 9 935 8 3.41581 BOP1;EMG1;EXOSC5;ISG20;NOP58;RRP9;UTP14A;UTP20 Cluster1 rRNA processing 0.000142561 0.0105759 3593 9 935 8 3.41581 BOP1;EMG1;EXOSC5;ISG20;NOP58;RRP9;UTP14A;UTP20 Cluster1 S phase 0.000165182 0.0114089 3593 15 935 11 2.81804 CDC6;GINS4;MCM3;MCM4;MCM5;PCNA;POLA1;POLE2;PSMB10;PSMB8;PSME3 Cluster1 S phase of mitotic cell cycle 0.000165182 0.0114089 3593 15 935 11 2.81804 CDC6;GINS4;MCM3;MCM4;MCM5;PCNA;POLA1;POLE2;PSMB10;PSMB8;PSME3 Cluster1 protein catabolic process 0.00025724 0.0171751 3593 45 935 23 1.96409 ABCG1;ACE;CBLC;CLN6;DERL3;FBXO2;HERC5;HERC6;MYLIP;PMAIP1;PRSS16;PSMB10;PSMB8;PSME3;RNF144B;SQSTM1;TGFB1I1;UCHL1;UFD1L;USP18;USP28;USP43;USP44 Cluster1 tRNA modification 0.000306873 0.019828 3593 6 935 6 3.84278 ALKBH8;METTL1;NSUN2;PUS1;QTRTD1;WDR4 Cluster1 coenzyme biosynthetic process 0.000335418 0.0209951 3593 18 935 12 2.56185 ACSL1;HAAO;ITGB1BP3;MAT1A;ME1;MOCOS;MTHFD1;MTHFD1L;NMNAT2;PCBD2;PDSS1;PPCDC Cluster1 cellular metabolic process 0.000358277 0.0217464 3593 1512 935 438 1.11319 AASS;ABCG1;ABI3;ACE;ACOT11;ACOT4;ACOXL;ACP5;ACSBG1;ACSL1;ACTL6B;ADAD2;ADAT3;ADM2;ADPRH;ADPRHL1;AFP;AGMAT;AGPAT9;AGXT2L1;AHR;AIFM2;AIMP2;AK4;ALDH1L1;ALKBH8;ALOX15;ALPPL2;AMBP;AMPD3;APOE;ARHGAP22;ASNS;ASPHD1;ASS1;ATF5;ATP12A;B3GALT1;B3GALT5;B3GNT3;B3GNT7;BCL11A;BCOR;BLM;BNC2;BOP1;C1GALT1;C2orf65;CA7;CA8;CACNA1D;CALCA;CALR3;CARS;CBLC;CBR1;CBS;CCNE1;CCRN4L;CD3EAP;CDC42BPG;CDC6;CDCA7;CDS1;CDX4;CEBPB;CHCHD4;CHDH;CHRM1;CHST13;CHST4;CHST7;CHST8;CHST9;CKMT1B;CLN6;CNDP2;CSTA;CTSH;CUX2;CXCR2;CYB5A;CYP1B1;CYP27B1;CYP2A13;CYP2J2;CYP2S1;DARS2;DCLK1;DDAH1;DDIT3;DERL3;DGKK;DHRS2;DHRS3;DMRT1;DNAJA4;DNAJC22;DNAJC30;DNMT3B;DOLK;DPF1;DPH2;DSCC1;DUSP13;DUSP2;E2F8;EAF2;EEFSEC;EIF4EBP1;EIF5A;ELF4;ELL3;EME2;EMG1;ENPP1;ENTPD3;EPAS1;EPHA1;EPHA8;EPHX1;ERG;ESRP1;ESRP2;ETV4;EXOSC5;FA2H;FAAH;FABP5;FADS3;FADS6;FAM54A;FANCA;FASTKD5;FBP1;FBXL21;FBXL6;FBXO2;FGF2;FHL2;FLT1;FOSL1;FOXH1;FOXL2;FOXO1;FUT1;G0S2;GALNT14;GALNT6;GATA2;GATA6;GCHFR;GCNT4;GEMIN7;GFPT2;GGTLC2;GHRL;GINS4;GLS2;GMDS;GMPPB;GNA14;GNAO1;GNG3;GNGT2;GPX3;GRHL2;GRM4;GSTO2;HAAO;HELLS;HENMT1;HERC5;HERC6;HIST1H2BJ;HMGN5;HMOX1;HMX1;HMX2;HNF4G;HNRNPM;HPDL;HPGD;HPSE;HSD11B2;HSPA8;HTR1B;IARS;IDH1;IDO1;IKBKE;IL12RB2;INHBA;IRF6;ISG20;ITGB1BP3;ITPA;ITPR2;ITPR3;KDR;KRT7;LARP7;LCK;LDHC;LDLRAP1;LECT1;LHX4;LHX6;LHX8;LMCD1;LPA;LPAR3;LPCAT3;LRAT;LRRC16A;MACC1;MAP3K5;MAP7;MARCH3;MARS;MAT1A;MATK;MBOAT1;MCM3;MCM4;MCM5;ME1;MEF2B;MESP2;MET;METTL1;MGST1;MIPEP;MLXIPL;MME;MOCOS;MPV17L;MRM1;MTG1;MTHFD1;MTHFD1L;MUC4;MX2;MYBBP1A;MYBL2;MYLIP;MYO3A;MYOCD;NAGPA;NAP1L3;NAT1;NDUFC2-KCTD14;NEURL2;NFIB;NGF;NME1;NMI;NMNAT2;NOP58;NOTO;NOXO1;NR2E3;NR5A2;NSUN2;NT5E;OGDHL;OVOL2;PACSIN1;PADI2;PADI4;PAH;PAPSS2;PCBD2;PCK2;PCNA;PDE2A;PDE6G;PDF;PDSS1;PDZRN3;PFAS;PFKP;PHF11;PHF15;PHLDA1;PID1;PIGW;PIM2;PINX1;PIPOX;PKLR;PKMYT1;PLA2G4C;PLA2G7;PLSCR1;PMAIP1;PMM2;POLA1;POLE2;POLR1A;POLR3B;POLR3G;POU2F3;POU5F1;PPAP2C;PPARGC1B;PPCDC;PPIC;PPM1J;PPP1R17;PPP1R1B;PPP1R3B;PPP1R3D;PRDM14;PRKCQ;PSAT1;PSMB10;PSMB8;PSME3;PSPC1;PTPN6;PTPRB;PUS1;PUS7;QTRTD1;RAMP3;RARRES2;RASD2;RASL11A;RBFOX3;RDH10;RDH12;REXO2;RHOD;RIPK1;RNASEH2B;RNF144B;RPP25;RRM2;RRP9;RTEL1;RUNX1T1;RUNX2;SEC24D;SEPHS1;SFTPD;SGK1;SGK3;SLC22A4;SLC25A10;SLC25A12;SLC25A13;SLC27A3;SLC27A6;SLC2A9;SLC5A6;SLC7A5;SLC7A7;SLTM;SMPDL3B;SMS;SNAI3;SNCB;SOCS2;SP110;SPIB;SQSTM1;SRPK3;SRSF2;SRSF3;STEAP1;STEAP2;SYK;SYNJ2;TAF4B;TARS;TBX10;TCF15;TCF19;TDGF1;TDRD5;TEAD4;TEK;TERT;TGFB1I1;TIPIN;TK1;TLE2;TNFSF11;TNIK;TNK1;TNNT2;TOMM40;TP53I3;TP73;TPH2;TRIB3;TRIM22;TRIML2;TRMT6;TSSK1B;TTF2;TUBA4A;UBTF;UCHL1;UFD1L;UGP2;UGT8;UNG;UPP1;USP18;USP28;USP43;USP44;UTP14A;UTP20;VRTN;WARS;WDR4;WDR77;WNK2;WWC1;YBX2;ZBTB42;ZFP42;ZFP57;ZIC3;ZNF114;ZNF165;ZNF239;ZNF326;ZNF488;ZNF552;ZNF560;ZNF597;ZNF765;ZNF782;ZSCAN10 Cluster1 small molecule metabolic process 0.000389476 0.0229447 3593 459 935 150 1.25581 AASS;ABCG1;ACOT11;ACOT4;ACOXL;ACP5;ACSBG1;ACSL1;AGMAT;AGPAT9;AGXT2L1;AIMP2;AK4;ALDH1L1;ALOX15;AMPD3;APOE;ASNS;ASS1;ATP12A;BLM;CA7;CA8;CACNA1D;CARS;CBR1;CBS;CDS1;CFTR;CHDH;CKMT1B;CLN6;CNDP2;CYB5A;CYP1B1;CYP27B1;CYP2A13;CYP2J2;CYP2S1;DARS2;DDAH1;DHRS3;DNMT3B;DOLK;EEFSEC;EIF5A;ENPP1;ENTPD3;EPAS1;FA2H;FAAH;FABP5;FADS3;FADS6;FBP1;FHL2;G0S2;GCHFR;GCNT4;GFPT2;GGTLC2;GLS2;GMDS;GMPPB;GNA14;GNAO1;GNG3;GNGT2;GPX3;GSTO2;HAAO;HMOX1;HPDL;HPGD;IARS;IDH1;IDO1;ITGB1BP3;ITPA;ITPR2;ITPR3;LDLRAP1;LPA;LRAT;LRRC16A;MARS;MAT1A;ME1;MGST1;MLXIPL;MME;MOCOS;MTG1;MTHFD1;MTHFD1L;MX2;NAT1;NME1;NMNAT2;NR5A2;NT5E;PADI2;PADI4;PAH;PAPSS2;PCK2;PDE2A;PDSS1;PFAS;PFKP;PIPOX;PKLR;PLA2G4C;PLSCR1;PMM2;PPAP2C;PPCDC;PSAT1;PSMB10;PSMB8;PSME3;QTRTD1;RASD2;RDH10;RDH12;REXO2;RHOD;RRM2;SLC22A4;SLC25A10;SLC25A12;SLC25A13;SLC27A3;SLC27A6;SLC2A9;SLC5A6;SLC7A5;SLC7A7;SMS;SNCB;SYK;TARS;TK1;TNNT2;TP53I3;TPH2;TRIB3;UGP2;UPP1;WARS Cluster1 primary metabolic process 0.000421459 0.0241195 3593 1575 935 454 1.1077 AASS;ABCG1;ABI3;ACAP1;ACE;ACOT11;ACOT4;ACOXL;ACSBG1;ACSL1;ACTL6B;ADAD2;ADAMTS14;ADAMTS16;ADAMTS17;ADAMTS19;ADAMTS5;ADAMTS8;ADAT3;ADM2;ADPRH;ADPRHL1;AFP;AGMAT;AGPAT9;AGXT2L1;AHR;AIFM2;AIMP2;AK4;ALKBH8;ALOX15;AMBP;AMPD3;APOE;ARHGAP22;ASNS;ASPHD1;ASS1;ATF5;ATP12A;B3GALT1;B3GALT5;B3GNT3;B3GNT7;BACE2;BCL11A;BCOR;BLM;BNC2;BOP1;C1GALT1;C1S;C2orf65;CALCA;CALR3;CAPN13;CARS;CBLC;CBS;CCNE1;CCRN4L;CD3EAP;CD44;CDC42BPG;CDC6;CDCA7;CDH1;CDS1;CDX4;CEBPB;CFTR;CHCHD4;CHDH;CHRM1;CHST13;CHST15;CHST4;CHST7;CHST8;CHST9;CKMT1B;CLN6;CNDP2;CPN1;CPZ;CR2;CSTA;CTSC;CTSH;CUX2;CYP1B1;CYP27B1;CYP2J2;DARS2;DCLK1;DDAH1;DDIT3;DERL3;DGKK;DHRS2;DHRS3;DMRT1;DNAJA4;DNAJC22;DNAJC30;DNMT3B;DOLK;DPF1;DPH2;DPP4;DSCC1;DUSP13;DUSP2;E2F8;EAF2;ECEL1;EEFSEC;EIF4EBP1;EIF5A;ELF4;ELL3;EME2;EMG1;ENPP1;ENTPD3;EPAS1;EPHA1;EPHA8;ERG;ESRP1;ESRP2;ETV4;EXOSC5;FA2H;FAAH;FABP5;FADS3;FADS6;FANCA;FBP1;FBXL21;FBXL6;FBXO2;FGF2;FHL2;FLT1;FOSL1;FOXH1;FOXL2;FOXO1;FUT1;G0S2;GALNT14;GALNT6;GATA2;GATA6;GCNT4;GEMIN7;GFPT2;GGTLC2;GHRL;GINS4;GLB1L3;GLS2;GMDS;GMPPB;GNA14;GNAO1;GNG3;GNGT2;GPX3;GRHL2;GRM4;HAAO;HELLS;HENMT1;HERC5;HERC6;HIST1H2BJ;HMGN5;HMX1;HMX2;HNF4G;HNRNPM;HPDL;HPGD;HPSE;HRASLS;HSD11B2;HSPA8;IARS;IDH1;IDO1;IKBKE;IL12RB2;IRF6;ISG20;ITGB1BP3;ITPA;KDR;KIAA1161;KLK13;KLK5;KLKB1;KRT7;LARP7;LCK;LDHC;LDLRAP1;LECT1;LHX4;LHX6;LHX8;LMCD1;LPA;LPAR3;LPCAT3;LRAT;LTF;MACC1;MAP3K5;MAP7;MARCH3;MARS;MAT1A;MATK;MBOAT1;MCM3;MCM4;MCM5;ME1;MEF2B;MESP2;MET;METTL1;MGST1;MIPEP;MLXIPL;MME;MMP14;MMP24;MMP25;MOCOS;MRM1;MTG1;MTHFD1;MUC4;MX2;MYBBP1A;MYBL2;MYLIP;MYO3A;MYOCD;NAGPA;NAP1L3;NCLN;NEURL2;NFIB;NGF;NLN;NME1;NMI;NMNAT2;NOP58;NOTO;NR2E3;NR5A2;NSUN2;NT5E;OGDHL;OTUD7A;OVOL2;PACSIN1;PADI2;PADI4;PAH;PAPSS2;PCK2;PCNA;PCSK1N;PDE2A;PDE6G;PDF;PDSS1;PDZRN3;PFAS;PFKP;PHF11;PHF15;PHLDA1;PIGW;PIM2;PINX1;PIPOX;PKLR;PKMYT1;PLA2G4C;PLA2G7;PLCL2;PLSCR1;PMAIP1;PMM2;PNPLA5;POLA1;POLE2;POLR1A;POLR3B;POLR3G;POU2F3;POU5F1;PPAP2C;PPARGC1B;PPCDC;PPIC;PPM1J;PPP1R17;PPP1R1B;PPP1R3B;PPP1R3D;PRDM14;PRKCQ;PRSS16;PRSS8;PSAT1;PSMB10;PSMB8;PSME3;PSPC1;PTPN6;PTPRB;PUS1;PUS7;PYCARD;QTRTD1;RARRES2;RASD2;RASL11A;RBFOX3;RDH10;RDH12;REXO2;RHBDF2;RHBDL3;RHOD;RIPK1;RNASEH2B;RNF144B;RPP25;RRM2;RRP9;RTEL1;RUNX1T1;RUNX2;SEC24D;SEPHS1;SGK1;SGK3;SLC22A4;SLC25A10;SLC25A12;SLC25A13;SLC27A3;SLC27A6;SLC3A2;SLC5A6;SLC7A5;SLC7A7;SLTM;SMPDL3B;SMS;SNAI3;SOCS2;SP110;SPIB;SPPL2A;SQSTM1;SRPK3;SRSF2;SRSF3;ST14;STAMBPL1;SYK;SYNJ2;TAF4B;TARS;TBX10;TCF15;TCF19;TDGF1;TDRD5;TEAD4;TEK;TERT;TFR2;TGFB1I1;TIPIN;TK1;TLE2;TMPRSS11E;TMPRSS2;TMPRSS3;TMPRSS4;TNFSF11;TNIK;TNK1;TNNT2;TOMM40;TP53I3;TP73;TPH2;TRIB3;TRIM22;TRIML2;TRMT6;TSSK1B;TTF2;TUBA4A;UBTF;UCHL1;UFD1L;UGP2;UGT8;UNG;UPP1;USP18;USP28;USP43;USP44;UTP14A;UTP20;VRTN;WARS;WDR4;WDR77;WNK2;WWC1;YBX2;YDJC;ZBTB42;ZFP42;ZFP57;ZIC3;ZNF114;ZNF165;ZNF239;ZNF326;ZNF488;ZNF552;ZNF560;ZNF597;ZNF765;ZNF782;ZSCAN10 Cluster1 DNA replication 0.000699846 0.0389386 3593 34 935 18 2.03441 BLM;CCNE1;CDC6;DSCC1;GINS4;KRT7;MCM3;MCM4;MCM5;NFIB;PCNA;PINX1;POLA1;POLE2;RRM2;TERT;TIPIN;TK1 Cluster1 cellular protein catabolic process 0.000818919 0.0443323 3593 37 935 19 1.97332 CBLC;DERL3;FBXO2;HERC5;HERC6;MYLIP;PMAIP1;PSMB10;PSMB8;PSME3;RNF144B;SQSTM1;TGFB1I1;UCHL1;UFD1L;USP18;USP28;USP43;USP44 Cluster2 regulation of system process 0.00295583 0.0472933 3593 199 6 3 9.02764 AVPR1A;OPRD1;S100A1 Cluster7 cell projection morphogenesis 2.43706e-05 0.0186111 3593 225 742 72 1.54954 AGAP2;AMIGO1;ATP7A;BBS2;BMP7;BMPR1B;BOC;CACNA1S;CACNB3;CNTNAP1;COL2A1;COL4A5;COL9A2;CTNNA2;DLG4;DMD;EFNA2;EFNA5;EFNB1;EFNB3;EPHA4;EPHA7;EPHB1;EPHB2;FEZF2;FOXD4L6;FOXG1;FRZB;FZD1;FZD2;FZD3;GAS1;GLI3;GSN;LAMA1;LGI1;LHX2;LMX1A;MAP2;NCAM1;NCAN;NEUROG2;NOG;NRCAM;NRTN;NTN3;NTN4;NTNG2;NYAP1;PAX6;PLXNC1;PTPRO;RFX3;RGMB;ROBO2;RSPH9;S100B;SEMA3A;SEMA5A;SFRP4;SHANK1;SHANK3;SLIT1;SLITRK3;SLITRK5;SLITRK6;ST8SIA2;ST8SIA4;TTLL3;ULK2;VAX1;WNT7B Cluster7 cell part morphogenesis 2.88498e-05 0.0186111 3593 226 742 72 1.54269 AGAP2;AMIGO1;ATP7A;BBS2;BMP7;BMPR1B;BOC;CACNA1S;CACNB3;CNTNAP1;COL2A1;COL4A5;COL9A2;CTNNA2;DLG4;DMD;EFNA2;EFNA5;EFNB1;EFNB3;EPHA4;EPHA7;EPHB1;EPHB2;FEZF2;FOXD4L6;FOXG1;FRZB;FZD1;FZD2;FZD3;GAS1;GLI3;GSN;LAMA1;LGI1;LHX2;LMX1A;MAP2;NCAM1;NCAN;NEUROG2;NOG;NRCAM;NRTN;NTN3;NTN4;NTNG2;NYAP1;PAX6;PLXNC1;PTPRO;RFX3;RGMB;ROBO2;RSPH9;S100B;SEMA3A;SEMA5A;SFRP4;SHANK1;SHANK3;SLIT1;SLITRK3;SLITRK5;SLITRK6;ST8SIA2;ST8SIA4;TTLL3;ULK2;VAX1;WNT7B Cluster7 nervous system development 3.04601e-05 0.0186111 3593 663 742 176 1.28544 AGAP2;AGT;AMIGO1;APLP1;AQP1;ARNT2;ATOH8;ATP7A;AZU1;BBS2;BMP7;BMPR1B;BOC;BTG2;CACNA1S;CACNB3;CADM1;CDH2;CDKN1C;CDKN2C;CDON;CHRD;CITED1;CNTFR;CNTNAP1;COL2A1;COL4A5;COL9A2;CRB1;CTNNA2;DHH;DIXDC1;DLG4;DLL1;DMD;DRP2;EFHD1;EFNA2;EFNA5;EFNB1;EFNB3;EGR3;EMX2;EPHA4;EPHA7;EPHB1;EPHB2;EYA1;FAIM2;FEZF2;FGF10;FGF14;FOXD4L6;FOXG1;FOXP2;FRZB;FZD1;FZD2;FZD3;GAS1;GDF10;GDF6;GFRA2;GLDN;GLI3;GLRB;GPC2;GPR56;GSN;HES4;HES5;IL1RAPL1;IL6ST;IRX3;IRX5;JAG1;KALRN;KCNIP2;LAMA1;LEF1;LGI1;LHX2;LMX1A;LRP2;LRRC4C;LSAMP;MAB21L2;MAP2;MDGA1;MDK;MECOM;METRN;MSI1;MSX1;MYT1;NCAM1;NCAN;NCOA6;NDNF;NDP;NEUROD4;NEUROG2;NOG;NR2F1;NRCAM;NRG1;NRGN;NRTN;NRXN2;NTN3;NTN4;NTNG2;NYAP1;OTX1;PALM;PAX6;PAX8;PCDH18;PCDHB10;PCDHB11;PCSK2;PGAP1;PLAG1;PLP1;PLXNC1;PMP22;POU3F2;PPP1R9B;PRDM16;PROX1;PTCH1;PTN;PTPRO;RAX;RFX4;RGMB;ROBO2;S100B;S1PR1;SATB2;SCRG1;SEMA3A;SEMA5A;SFRP4;SHANK1;SHANK3;SLIT1;SLITRK3;SLITRK5;SLITRK6;SMAD9;SMARCD3;SMPD1;SOX11;SOX5;SOX6;SRCIN1;SRR;ST8SIA2;ST8SIA4;STMN2;SUFU;SULF1;TAGLN3;TTC3;ULK2;USH2A;VAX1;WNT1;WNT5B;WNT7B;WNT8B;ZBTB16;ZEB1;ZEB2;ZNF536 Cluster7 cell morphogenesis 4.12565e-05 0.0189058 3593 276 742 84 1.47375 AGAP2;AMIGO1;ATP7A;BBS2;BCL6;BMP7;BMPR1B;BOC;CACNA1S;CACNB3;CADM1;CITED1;CNTNAP1;COL2A1;COL4A5;COL9A2;CTNNA2;DLG4;DMD;EFNA2;EFNA5;EFNB1;EFNB3;EPHA4;EPHA7;EPHB1;EPHB2;FEZF2;FOXD4L6;FOXG1;FOXS1;FRZB;FZD1;FZD2;FZD3;GAS1;GLI3;GSN;LAMA1;LEF1;LGI1;LHX2;LMX1A;LOXL3;MAP2;MSX1;NCAM1;NCAN;NEUROG2;NOG;NRCAM;NRTN;NTN3;NTN4;NTNG2;NYAP1;PAX6;PAX8;PLXNC1;PROX1;PTPRO;RFX3;RGMB;ROBO2;RSPH9;S100B;SEMA3A;SEMA5A;SFRP4;SHANK1;SHANK3;SLIT1;SLITRK3;SLITRK5;SLITRK6;SNAI2;SOX6;SRCIN1;ST8SIA2;ST8SIA4;TTLL3;ULK2;VAX1;WNT7B Cluster7 neuron projection morphogenesis 7.34641e-05 0.0258581 3593 212 742 67 1.53036 AGAP2;AMIGO1;ATP7A;BMP7;BMPR1B;BOC;CACNA1S;CACNB3;CNTNAP1;COL2A1;COL4A5;COL9A2;CTNNA2;DLG4;DMD;EFNA2;EFNA5;EFNB1;EFNB3;EPHA4;EPHA7;EPHB1;EPHB2;FEZF2;FOXD4L6;FOXG1;FRZB;FZD1;FZD2;FZD3;GAS1;GLI3;LAMA1;LGI1;LHX2;LMX1A;MAP2;NCAM1;NCAN;NEUROG2;NOG;NRCAM;NRTN;NTN3;NTN4;NTNG2;NYAP1;PAX6;PLXNC1;PTPRO;RGMB;ROBO2;S100B;SEMA3A;SEMA5A;SFRP4;SHANK1;SHANK3;SLIT1;SLITRK3;SLITRK5;SLITRK6;ST8SIA2;ST8SIA4;ULK2;VAX1;WNT7B Cluster7 cell morphogenesis involved in neuron differentiation 8.46418e-05 0.0258581 3593 205 742 65 1.53537 AGAP2;AMIGO1;ATP7A;BMP7;BMPR1B;BOC;CACNA1S;CACNB3;CNTNAP1;COL2A1;COL4A5;COL9A2;CTNNA2;DLG4;EFNA2;EFNA5;EFNB1;EFNB3;EPHA4;EPHA7;EPHB1;EPHB2;FEZF2;FOXD4L6;FOXG1;FRZB;FZD1;FZD2;FZD3;GAS1;GLI3;LAMA1;LGI1;LHX2;LMX1A;MAP2;NCAM1;NCAN;NEUROG2;NOG;NRCAM;NRTN;NTN3;NTN4;NTNG2;PAX6;PLXNC1;PTPRO;RGMB;ROBO2;S100B;SEMA3A;SEMA5A;SFRP4;SHANK1;SHANK3;SLIT1;SLITRK3;SLITRK5;SLITRK6;ST8SIA2;ST8SIA4;ULK2;VAX1;WNT7B Cluster7 cell morphogenesis involved in differentiation 0.000103324 0.027056 3593 242 742 74 1.48071 AGAP2;AMIGO1;ATP7A;BMP7;BMPR1B;BOC;CACNA1S;CACNB3;CITED1;CNTNAP1;COL2A1;COL4A5;COL9A2;CTNNA2;DLG4;EFNA2;EFNA5;EFNB1;EFNB3;EPHA4;EPHA7;EPHB1;EPHB2;FEZF2;FOXD4L6;FOXG1;FOXS1;FRZB;FZD1;FZD2;FZD3;GAS1;GLI3;LAMA1;LEF1;LGI1;LHX2;LMX1A;LOXL3;MAP2;MSX1;NCAM1;NCAN;NEUROG2;NOG;NRCAM;NRTN;NTN3;NTN4;NTNG2;PAX6;PAX8;PLXNC1;PROX1;PTPRO;RGMB;ROBO2;S100B;SEMA3A;SEMA5A;SFRP4;SHANK1;SHANK3;SLIT1;SLITRK3;SLITRK5;SLITRK6;SNAI2;SRCIN1;ST8SIA2;ST8SIA4;ULK2;VAX1;WNT7B Cluster7 axonogenesis 0.000133804 0.0306579 3593 196 742 62 1.53175 AGAP2;AMIGO1;BMP7;BMPR1B;BOC;CACNA1S;CACNB3;CNTNAP1;COL2A1;COL4A5;COL9A2;CTNNA2;DLG4;EFNA2;EFNA5;EFNB1;EFNB3;EPHA4;EPHA7;EPHB1;EPHB2;FEZF2;FOXD4L6;FOXG1;FRZB;FZD1;FZD2;FZD3;GAS1;GLI3;LAMA1;LGI1;LHX2;LMX1A;MAP2;NCAM1;NCAN;NEUROG2;NOG;NRCAM;NRTN;NTN3;NTN4;NTNG2;PAX6;PLXNC1;PTPRO;RGMB;ROBO2;S100B;SEMA3A;SEMA5A;SFRP4;SLIT1;SLITRK3;SLITRK5;SLITRK6;ST8SIA2;ST8SIA4;ULK2;VAX1;WNT7B Cluster7 brain development 0.000217633 0.0380234 3593 203 742 63 1.50279 AQP1;ATP7A;BBS2;BTG2;CADM1;CDON;CHRD;CITED1;CTNNA2;DIXDC1;EFNA2;EFNA5;EMX2;EPHA7;EPHB2;FAIM2;FEZF2;FGF10;FOXG1;FOXP2;FRZB;FZD1;FZD2;FZD3;GAS1;GDF10;GLI3;GPR56;HES5;LEF1;LHX2;LMX1A;LRP2;MDGA1;MDK;MECOM;MSX1;NCOA6;NEUROG2;NOG;NR2F1;OTX1;PAX6;PCDH18;PGAP1;POU3F2;PROX1;PTCH1;RAX;RFX4;ROBO2;S1PR1;SFRP4;SHANK3;SLIT1;SMAD9;SRR;VAX1;WNT1;WNT7B;WNT8B;ZEB1;ZEB2 Cluster7 appendage development 0.000240241 0.0380234 3593 58 742 24 2.00372 AFF3;BMP7;BMPR1B;COL2A1;CYP26B1;FBN2;FGF10;FGF9;GAS1;GDF5;GLI3;GPC3;KIAA1715;LEF1;MECOM;MSX1;MUSTN1;NOG;PTCH1;RAX;SMOC1;SOX11;SP8;ZBTB16 Cluster7 limb development 0.000240241 0.0380234 3593 58 742 24 2.00372 AFF3;BMP7;BMPR1B;COL2A1;CYP26B1;FBN2;FGF10;FGF9;GAS1;GDF5;GLI3;GPC3;KIAA1715;LEF1;MECOM;MSX1;MUSTN1;NOG;PTCH1;RAX;SMOC1;SOX11;SP8;ZBTB16 Cluster7 cellular component morphogenesis 0.000274979 0.0380234 3593 294 742 85 1.39999 AGAP2;AMIGO1;ATP7A;BBS2;BCL6;BMP7;BMPR1B;BOC;CACNA1S;CACNB3;CADM1;CITED1;CNTNAP1;COL2A1;COL4A5;COL9A2;CTNNA2;DLG4;DMD;EFNA2;EFNA5;EFNB1;EFNB3;EPHA4;EPHA7;EPHB1;EPHB2;FEZF2;FOXD4L6;FOXG1;FOXS1;FRZB;FZD1;FZD2;FZD3;GAS1;GLI3;GSN;LAMA1;LEF1;LGI1;LHX2;LMX1A;LOXL3;MAP2;MSX1;NCAM1;NCAN;NEUROG2;NOG;NRCAM;NRTN;NTN3;NTN4;NTNG2;NYAP1;PAX6;PAX8;PLXNC1;PMP22;PROX1;PTPRO;RFX3;RGMB;ROBO2;RSPH9;S100B;SEMA3A;SEMA5A;SFRP4;SHANK1;SHANK3;SLIT1;SLITRK3;SLITRK5;SLITRK6;SNAI2;SOX6;SRCIN1;ST8SIA2;ST8SIA4;TTLL3;ULK2;VAX1;WNT7B Cluster7 axon guidance 0.000285945 0.0380234 3593 146 742 48 1.59199 AGAP2;BMP7;BMPR1B;BOC;CACNA1S;CACNB3;CNTNAP1;COL2A1;COL4A5;COL9A2;DLG4;EFNA2;EFNA5;EFNB1;EFNB3;EPHA4;EPHA7;EPHB1;EPHB2;FEZF2;FOXD4L6;FOXG1;FZD3;GAS1;GLI3;LAMA1;LGI1;LHX2;LMX1A;NCAM1;NCAN;NEUROG2;NOG;NRCAM;NRTN;NTN3;NTN4;PAX6;PLXNC1;PTPRO;RGMB;ROBO2;SEMA3A;SEMA5A;SLIT1;ST8SIA2;ST8SIA4;VAX1 Cluster7 forebrain regionalization 0.000290413 0.0380234 3593 11 742 8 3.52169 EMX2;FEZF2;GLI3;LHX2;PAX6;PGAP1;WNT1;WNT7B Cluster7 retinal ganglion cell axon guidance 0.000379989 0.0389825 3593 9 742 7 3.76625 BMPR1B;EFNA5;EPHA7;EPHB1;NRCAM;ROBO2;SLIT1 Cluster7 neuron projection development 0.000386216 0.0389825 3593 231 742 69 1.44641 AGAP2;AMIGO1;ATP7A;BMP7;BMPR1B;BOC;BTG2;CACNA1S;CACNB3;CNTNAP1;COL2A1;COL4A5;COL9A2;CTNNA2;DLG4;DMD;EFHD1;EFNA2;EFNA5;EFNB1;EFNB3;EPHA4;EPHA7;EPHB1;EPHB2;FEZF2;FOXD4L6;FOXG1;FRZB;FZD1;FZD2;FZD3;GAS1;GLI3;LAMA1;LGI1;LHX2;LMX1A;MAP2;NCAM1;NCAN;NEUROG2;NOG;NRCAM;NRTN;NTN3;NTN4;NTNG2;NYAP1;PAX6;PLXNC1;PTPRO;RGMB;ROBO2;S100B;SEMA3A;SEMA5A;SFRP4;SHANK1;SHANK3;SLIT1;SLITRK3;SLITRK5;SLITRK6;ST8SIA2;ST8SIA4;ULK2;VAX1;WNT7B Cluster7 appendage morphogenesis 0.000411974 0.0389825 3593 53 742 22 2.01002 AFF3;BMP7;BMPR1B;COL2A1;CYP26B1;FBN2;FGF10;FGF9;GAS1;GDF5;GLI3;GPC3;KIAA1715;LEF1;MECOM;MSX1;MUSTN1;NOG;PTCH1;SOX11;SP8;ZBTB16 Cluster7 limb morphogenesis 0.000411974 0.0389825 3593 53 742 22 2.01002 AFF3;BMP7;BMPR1B;COL2A1;CYP26B1;FBN2;FGF10;FGF9;GAS1;GDF5;GLI3;GPC3;KIAA1715;LEF1;MECOM;MSX1;MUSTN1;NOG;PTCH1;SOX11;SP8;ZBTB16 Cluster7 embryonic appendage morphogenesis 0.000425341 0.0389825 3593 40 742 18 2.17904 AFF3;BMP7;CYP26B1;FBN2;FGF9;GAS1;GDF5;GLI3;GPC3;KIAA1715;LEF1;MECOM;MSX1;MUSTN1;NOG;PTCH1;SP8;ZBTB16 Cluster7 embryonic limb morphogenesis 0.000425341 0.0389825 3593 40 742 18 2.17904 AFF3;BMP7;CYP26B1;FBN2;FGF9;GAS1;GDF5;GLI3;GPC3;KIAA1715;LEF1;MECOM;MSX1;MUSTN1;NOG;PTCH1;SP8;ZBTB16 Cluster7 forebrain development 0.000474086 0.0396781 3593 122 742 41 1.62734 AQP1;ATP7A;BBS2;BTG2;CDON;CHRD;DIXDC1;EFNA2;EMX2;EPHB2;FEZF2;FGF10;FOXG1;FOXP2;GLI3;HES5;LEF1;LHX2;LMX1A;LRP2;MDK;MECOM;MSX1;NEUROG2;NOG;NR2F1;OTX1;PAX6;PGAP1;POU3F2;PROX1;RAX;RFX4;ROBO2;SHANK3;SLIT1;WNT1;WNT7B;WNT8B;ZEB1;ZEB2 Cluster7 central nervous system development 0.000476224 0.0396781 3593 286 742 82 1.38836 AGT;AQP1;ARNT2;ATP7A;BBS2;BTG2;CADM1;CDKN2C;CDON;CHRD;CITED1;COL2A1;CTNNA2;DIXDC1;DRP2;EFNA2;EFNA5;EMX2;EPHA4;EPHA7;EPHB1;EPHB2;FAIM2;FEZF2;FGF10;FOXG1;FOXP2;FRZB;FZD1;FZD2;FZD3;GAS1;GDF10;GLI3;GPR56;GSN;HES5;LEF1;LHX2;LMX1A;LRP2;MAP2;MDGA1;MDK;MECOM;MSX1;NCOA6;NEUROG2;NOG;NR2F1;NRCAM;OTX1;PAX6;PAX8;PCDH18;PGAP1;PLP1;POU3F2;PROX1;PTCH1;RAX;RFX4;ROBO2;S100B;S1PR1;SFRP4;SHANK3;SLIT1;SMAD9;SOX11;SOX5;SOX6;SRR;SUFU;TAGLN3;VAX1;WNT1;WNT7B;WNT8B;ZBTB16;ZEB1;ZEB2 Cluster7 regulation of osteoblast differentiation 0.000614631 0.048946 3593 41 742 18 2.1259 BMP7;BMPR1B;CHRD;CITED1;CTNNBIP1;FBN2;FZD1;GDF10;GLI3;IL6ST;NOG;OSTN;PTCH1;SMOC1;SNAI2;SOX11;SUFU;WNT7B Cluster7 neurogenesis 0.000640865 0.048946 3593 446 742 119 1.29201 AGAP2;AGT;AMIGO1;ATP7A;AZU1;BMP7;BMPR1B;BOC;BTG2;CACNA1S;CACNB3;CDH2;CDKN1C;CDKN2C;CDON;CNTNAP1;COL2A1;COL4A5;COL9A2;CRB1;CTNNA2;DIXDC1;DLG4;DLL1;DMD;EFHD1;EFNA2;EFNA5;EFNB1;EFNB3;EMX2;EPHA4;EPHA7;EPHB1;EPHB2;EYA1;FAIM2;FEZF2;FOXD4L6;FOXG1;FRZB;FZD1;FZD2;FZD3;GAS1;GDF6;GLI3;GPC2;GSN;HES5;IL1RAPL1;IL6ST;IRX3;IRX5;JAG1;KCNIP2;LAMA1;LEF1;LGI1;LHX2;LMX1A;LRRC4C;MAP2;MDGA1;NCAM1;NCAN;NDNF;NEUROD4;NEUROG2;NOG;NR2F1;NRCAM;NRTN;NTN3;NTN4;NTNG2;NYAP1;PALM;PAX6;PLAG1;PLP1;PLXNC1;PMP22;POU3F2;PRDM16;PROX1;PTPRO;RGMB;ROBO2;S100B;S1PR1;SATB2;SEMA3A;SEMA5A;SFRP4;SHANK1;SHANK3;SLIT1;SLITRK3;SLITRK5;SLITRK6;SMARCD3;SOX11;SOX5;SOX6;SRCIN1;ST8SIA2;ST8SIA4;STMN2;TTC3;ULK2;USH2A;VAX1;WNT1;WNT5B;WNT7B;WNT8B;ZEB1;ZNF536 Cluster9 ion transport 0.00018559 0.00501093 3593 259 9 5 7.70699 ANKH;ATP1A3;GJA4;KCNB2;SLCO4A1 Cluster9 transport 0.00327171 0.0311583 3593 729 9 6 3.28578 ABCB1;ANKH;ATP1A3;GJA4;KCNB2;SLCO4A1 Cluster9 establishment of localization 0.00365116 0.0311583 3593 744 9 6 3.21953 ABCB1;ANKH;ATP1A3;GJA4;KCNB2;SLCO4A1 Cluster9 carboxylic acid metabolic process 0.00856225 0.0311583 3593 182 9 3 6.58059 ACADS;ACOT1;SLCO4A1 Cluster9 oxoacid metabolic process 0.00856225 0.0311583 3593 182 9 3 6.58059 ACADS;ACOT1;SLCO4A1 Cluster9 transmembrane transport 0.00896049 0.0311583 3593 185 9 3 6.47387 ABCB1;ATP1A3;SLCO4A1 Cluster9 cellular ketone metabolic process 0.00909568 0.0311583 3593 186 9 3 6.43907 ACADS;ACOT1;SLCO4A1 Cluster9 organic acid metabolic process 0.0092321 0.0311583 3593 187 9 3 6.40463 ACADS;ACOT1;SLCO4A1 Cluster9 localization 0.0161105 0.0483316 3593 987 9 6 2.42688 ABCB1;ANKH;ATP1A3;GJA4;KCNB2;SLCO4A1 Cluster20 regulation of synaptic transmission 0.000341647 0.0356772 3593 83 42 6 6.18417 ARC;CHRNB4;DRD5;GRIN2B;KCNQ4;SNCG Cluster20 regulation of transmission of nerve impulse 0.000469718 0.0356772 3593 88 42 6 5.83279 ARC;CHRNB4;DRD5;GRIN2B;KCNQ4;SNCG Cluster20 response to hormone stimulus 0.000558202 0.0356772 3593 257 42 10 3.3287 ADM;CASP8;CRHR2;CUZD1;FABP3;GRIN2B;IL4R;LYN;TACR3;WNT4 Cluster20 regulation of neurological system process 0.000669939 0.0356772 3593 94 42 6 5.46049 ARC;CHRNB4;DRD5;GRIN2B;KCNQ4;SNCG Cluster20 response to cocaine 0.000748472 0.0356772 3593 16 42 3 16.0402 DRD5;GRIN2B;TACR3 Cluster20 response to tropane 0.000748472 0.0356772 3593 16 42 3 16.0402 DRD5;GRIN2B;TACR3 Cluster20 response to endogenous stimulus 0.00104758 0.0428013 3593 330 42 11 2.85159 ADM;CASP8;CRHR2;CUZD1;DRD5;FABP3;GRIN2B;IL4R;LYN;TACR3;WNT4 Cluster39 response to acid 7.53857e-05 0.0151525 3593 39 22 4 16.7506 ANXA2;COL1A1;CYP11A1;S100A10 Cluster39 cellular response to acid 0.000246851 0.0222674 3593 21 22 3 23.3312 ANXA2;COL1A1;S100A10 Cluster39 response to chemical stimulus 0.000493924 0.0222674 3593 872 22 13 2.43479 ADCY9;ALDOC;ANXA2;CLDN4;COL1A1;CYP11A1;FOXD3;L1CAM;MT2A;PDIA5;PLAU;PRNP;S100A10 Cluster39 protein localization to nucleus 0.000530097 0.0222674 3593 27 22 3 18.1465 COL1A1;PRICKLE1;TRPS1 Cluster39 regulation of body fluid levels 0.000553915 0.0222674 3593 180 22 6 5.44394 ANXA2;COL1A1;L1CAM;PLAU;RAPGEF3;RAPGEF4 Cluster39 generation of precursor metabolites and energy 0.0011171 0.0342447 3593 78 22 4 8.37529 ADCY9;ALDOC;RAPGEF3;RAPGEF4 Cluster39 energy reserve metabolic process 0.00157918 0.0342447 3593 39 22 3 12.5629 ADCY9;RAPGEF3;RAPGEF4 Cluster39 blood coagulation 0.00165318 0.0342447 3593 148 22 5 5.51751 COL1A1;L1CAM;PLAU;RAPGEF3;RAPGEF4 Cluster39 coagulation 0.00165318 0.0342447 3593 148 22 5 5.51751 COL1A1;L1CAM;PLAU;RAPGEF3;RAPGEF4 Cluster39 hemostasis 0.00170372 0.0342447 3593 149 22 5 5.48048 COL1A1;L1CAM;PLAU;RAPGEF3;RAPGEF4 Cluster39 protein localization to organelle 0.00224353 0.0409954 3593 44 22 3 11.1353 COL1A1;PRICKLE1;TRPS1 Cluster52 positive regulation of catalytic activity 0.0026616 0.0474202 3593 240 5 3 8.9825 AFAP1L2;GRHL3;RGS16 Cluster52 positive regulation of molecular function 0.00474202 0.0474202 3593 293 5 3 7.35768 AFAP1L2;GRHL3;RGS16 Cluster54 response to acid 9.37513e-05 0.028473 3593 39 71 6 7.78548 BCL2;COL3A1;COL5A2;PDGFC;SST;TIMP3 Cluster54 response to amino acid stimulus 0.000214666 0.028473 3593 29 71 5 8.72511 COL3A1;COL5A2;PDGFC;SST;TIMP3 Cluster54 cellular component organization at cellular level 0.000295831 0.028473 3593 678 71 26 1.94063 AKT3;BAIAP2;BCL2;CALY;CBX4;CHST3;COL11A1;COL3A1;COL5A2;EGFLAM;GPM6A;HGF;IDUA;KAZALD1;MAP1LC3A;MAPT;NEK6;NR4A3;PDGFC;RELN;SETD7;SNAP25;SYNE1;TBR1;TEKT1;TPPP3 Cluster54 cellular protein modification process 0.000370958 0.028473 3593 388 71 18 2.34768 AKT3;B3GALT2;BCL2;CBX4;COL3A1;DUSP1;EGFLAM;GALNT5;HGF;MKRN3;MUC12;NEK6;PROK1;RELN;SETD7;TRIM9;VEGFB;WNT7A Cluster54 protein modification process 0.000370958 0.028473 3593 388 71 18 2.34768 AKT3;B3GALT2;BCL2;CBX4;COL3A1;DUSP1;EGFLAM;GALNT5;HGF;MKRN3;MUC12;NEK6;PROK1;RELN;SETD7;TRIM9;VEGFB;WNT7A Cluster54 cellular component organization or biogenesis at cellular level 0.000395458 0.028473 3593 690 71 26 1.90688 AKT3;BAIAP2;BCL2;CALY;CBX4;CHST3;COL11A1;COL3A1;COL5A2;EGFLAM;GPM6A;HGF;IDUA;KAZALD1;MAP1LC3A;MAPT;NEK6;NR4A3;PDGFC;RELN;SETD7;SNAP25;SYNE1;TBR1;TEKT1;TPPP3 Cluster54 regeneration 0.000530368 0.0327313 3593 53 71 6 5.72894 BCL2;CHST3;HGF;NR4A3;TIMP3;WNT7A Cluster54 macromolecule modification 0.000648104 0.0349976 3593 406 71 18 2.2436 AKT3;B3GALT2;BCL2;CBX4;COL3A1;DUSP1;EGFLAM;GALNT5;HGF;MKRN3;MUC12;NEK6;PROK1;RELN;SETD7;TRIM9;VEGFB;WNT7A Cluster55 regulation of system process 9.14402e-06 0.000265177 3593 199 4 4 18.0553 AGTR1;APOA1;CACNA1B;CPLX2 Cluster55 secretion by cell 0.000149088 0.00216178 3593 122 4 3 22.0881 APOA1;CACNA1B;CPLX2 Cluster55 secretion 0.000282271 0.00272861 3593 151 4 3 17.846 APOA1;CACNA1B;CPLX2 Cluster55 regulation of multicellular organismal process 0.00103702 0.00670371 3593 646 4 4 5.56192 AGTR1;APOA1;CACNA1B;CPLX2 Cluster55 establishment of localization in cell 0.00124878 0.00670371 3593 249 4 3 10.8223 APOA1;CACNA1B;CPLX2 Cluster55 chemical homeostasis 0.00138697 0.00670371 3593 258 4 3 10.4448 AGTR1;APOA1;CACNA1B Cluster55 regulation of biological quality 0.00163774 0.00678494 3593 724 4 4 4.96271 AGTR1;APOA1;CACNA1B;CPLX2 Cluster55 regulation of transport 0.00231587 0.00760613 3593 307 4 3 8.77769 AGTR1;APOA1;CACNA1B Cluster55 cellular localization 0.00236052 0.00760613 3593 309 4 3 8.72087 APOA1;CACNA1B;CPLX2 Cluster55 homeostatic process 0.0027878 0.00808461 3593 327 4 3 8.24083 AGTR1;APOA1;CACNA1B Cluster55 localization 0.0056692 0.0149461 3593 987 4 4 3.64032 AGTR1;APOA1;CACNA1B;CPLX2 Cluster55 regulation of localization 0.00629073 0.0152026 3593 432 4 3 6.23785 AGTR1;APOA1;CACNA1B Cluster55 regulation of molecular function 0.0112468 0.0250889 3593 528 4 3 5.10369 AGTR1;APOA1;CACNA1B Cluster55 system process 0.0151003 0.0312793 3593 585 4 3 4.60641 AGTR1;CACNA1B;CPLX2 Cluster55 signaling 0.0173516 0.0335465 3593 1305 4 4 2.75326 AGTR1;APOA1;CACNA1B;CPLX2 Cluster55 cell communication 0.0196984 0.0357033 3593 1347 4 4 2.66741 AGTR1;APOA1;CACNA1B;CPLX2 Cluster55 transport 0.0282494 0.0481901 3593 729 4 3 3.6965 APOA1;CACNA1B;CPLX2 Cluster55 establishment of localization 0.0299208 0.0482058 3593 744 4 3 3.62198 APOA1;CACNA1B;CPLX2 Cluster57 embryonic camera-type eye development 1.26696e-05 0.00148234 3593 15 12 3 59.8833 ALDH1A2;FZD5;PAX2 Cluster57 developmental maturation 0.000714384 0.0417914 3593 56 12 3 16.0402 ALDH1A2;FZD5;PAX2 Cluster59 negative regulation of intracellular protein kinase cascade 7.82519e-05 0.0109553 3593 36 24 4 16.6343 DUSP5;LIF;NDRG2;PHLDA3 Cluster59 negative regulation of MAPK cascade 0.000689747 0.0398591 3593 27 24 3 16.6343 DUSP5;LIF;NDRG2 Cluster59 defense response to bacterium 0.000854123 0.0398591 3593 29 24 3 15.4871 IL27RA;PLD1;SERPINE1 Cluster60 multi-organism process 0.00715036 0.0362553 3593 271 6 3 6.62915 HFE;MFGE8;NCF1 Cluster60 reproductive process 0.00979671 0.0362553 3593 303 6 3 5.92904 AKAP14;HFE;MFGE8 Cluster60 reproduction 0.0098878 0.0362553 3593 304 6 3 5.90954 AKAP14;HFE;MFGE8 Cluster69 ERBB signaling pathway 0.000398737 0.0201362 3593 34 16 3 19.8143 EGF;HBEGF;SHC3 Cluster69 epidermal growth factor receptor signaling pathway 0.000398737 0.0201362 3593 34 16 3 19.8143 EGF;HBEGF;SHC3 Cluster70 DNA metabolic process 1.08479e-06 0.000412219 3593 112 70 12 5.49949 APITD1;BRCC3;CDC45;CHAF1B;GINS2;GINS3;HIST2H3A;PRMT6;RAD51D;SFPQ;TCF7;TREX2 Cluster70 DNA repair 6.13816e-06 0.00116625 3593 38 70 7 9.45526 APITD1;BRCC3;CHAF1B;PRMT6;RAD51D;SFPQ;TREX2 Cluster70 cell cycle 1.13768e-05 0.00144106 3593 164 70 13 4.06873 APITD1;CCNE2;CDC45;CENPM;CHAF1B;DHFR;E2F1;ESCO2;GINS2;MAEA;PKD2;RAD51D;TUBB1 Cluster70 cell cycle phase 1.60566e-05 0.00152538 3593 99 70 10 5.1847 APITD1;CCNE2;CDC45;CENPM;DHFR;E2F1;GINS2;PKD2;RAD51D;TUBB1 Cluster70 nucleic acid metabolic process 4.27803e-05 0.00315628 3593 616 70 26 2.16647 APITD1;ARNTL2;BRCC3;CDC45;CEBPA;CHAF1B;DGCR8;E2F1;ELAC1;FUS;GINS2;GINS3;HIST2H3A;LCMT2;NCOA5;POLR3H;PRMT6;RAD51D;SFPQ;SRRT;TCF7;TREX2;ZFHX2;ZNF235;ZNF268;ZNF778 Cluster70 response to DNA damage stimulus 4.9836e-05 0.00315628 3593 70 70 8 5.86612 APITD1;BRCC3;CHAF1B;E2F1;PRMT6;RAD51D;SFPQ;TREX2 Cluster70 mitotic cell cycle 7.47721e-05 0.00405906 3593 74 70 8 5.54903 APITD1;CCNE2;CDC45;CENPM;DHFR;E2F1;GINS2;PKD2 Cluster70 cell cycle process 0.000139607 0.00663133 3593 127 70 10 4.04162 APITD1;CCNE2;CDC45;CENPM;DHFR;E2F1;GINS2;PKD2;RAD51D;TUBB1 Cluster70 interphase of mitotic cell cycle 0.000397217 0.0129257 3593 51 70 6 6.03866 CCNE2;CDC45;DHFR;E2F1;GINS2;PKD2 Cluster70 nucleobase-containing compound metabolic process 0.000405387 0.0129257 3593 743 70 27 1.86524 APITD1;ARNTL2;BRCC3;CDC45;CEBPA;CHAF1B;DGCR8;DHFR;E2F1;ELAC1;FUS;GINS2;GINS3;HIST2H3A;LCMT2;NCOA5;POLR3H;PRMT6;RAD51D;SFPQ;SRRT;TCF7;TREX2;ZFHX2;ZNF235;ZNF268;ZNF778 Cluster70 DNA replication 0.000435955 0.0129257 3593 34 70 5 7.54832 APITD1;CDC45;CHAF1B;GINS2;GINS3 Cluster70 regulation of cell cycle arrest 0.000435955 0.0129257 3593 34 70 5 7.54832 BRCC3;CCNE2;CDC45;E2F1;PKD2 Cluster70 interphase 0.000442195 0.0129257 3593 52 70 6 5.92253 CCNE2;CDC45;DHFR;E2F1;GINS2;PKD2 Cluster70 nitrogen compound metabolic process 0.000505115 0.0136103 3593 837 70 29 1.77841 APITD1;ARNTL2;BRCC3;CDC45;CEBPA;CHAF1B;DGCR8;DHFR;E2F1;ELAC1;FUS;GINS2;GINS3;HIST2H3A;LCMT2;NCOA5;POLR3H;PRMT6;RAD51D;SFPQ;SLC19A1;SPHK2;SRRT;TCF7;TREX2;ZFHX2;ZNF235;ZNF268;ZNF778 Cluster70 regulation of transcription involved in G1/S phase of mitotic cell cycle 0.000547095 0.0136103 3593 9 70 3 17.1095 CDC45;DHFR;E2F1 Cluster70 G1/S transition of mitotic cell cycle 0.000573067 0.0136103 3593 36 70 5 7.12897 CCNE2;CDC45;DHFR;E2F1;PKD2 Cluster70 DNA recombination 0.000615779 0.0137645 3593 21 70 4 9.77687 APITD1;RAD51D;SFPQ;TCF7 Cluster70 RNA processing 0.000879106 0.0176929 3593 59 70 6 5.21985 DGCR8;ELAC1;FUS;LCMT2;SFPQ;SRRT Cluster70 ncRNA processing 0.000884647 0.0176929 3593 23 70 4 8.92671 DGCR8;ELAC1;LCMT2;SRRT Cluster70 cellular macromolecule metabolic process 0.00161519 0.03042 3593 1075 70 33 1.57567 APITD1;ARNTL2;BRCC3;CDC45;CEBPA;CHAF1B;DBNL;DGCR8;E2F1;ELAC1;ESCO2;FLT3;FUS;GINS2;GINS3;HIST2H3A;LCMT2;MAP6D1;NCOA5;POLR3H;PRMT6;PSEN2;RAB40A;RAD51D;SFPQ;SRRT;TCF7;TREX2;TUBB1;ZFHX2;ZNF235;ZNF268;ZNF778 Cluster70 negative regulation of sequestering of calcium ion 0.00176116 0.03042 3593 13 70 3 11.8451 CCR7;GLP1R;PKD2 Cluster70 release of sequestered calcium ion into cytosol 0.00176116 0.03042 3593 13 70 3 11.8451 CCR7;GLP1R;PKD2 Cluster70 cell cycle checkpoint 0.00190067 0.0314023 3593 28 70 4 7.33265 BRCC3;CCNE2;CDC45;E2F1 Cluster70 cellular nitrogen compound metabolic process 0.00209453 0.0331634 3593 822 70 27 1.68597 APITD1;ARNTL2;BRCC3;CDC45;CEBPA;CHAF1B;DGCR8;DHFR;E2F1;ELAC1;FUS;GINS2;GINS3;HIST2H3A;LCMT2;NCOA5;POLR3H;PRMT6;RAD51D;SFPQ;SRRT;TCF7;TREX2;ZFHX2;ZNF235;ZNF268;ZNF778 Cluster70 regulation of sequestering of calcium ion 0.00221033 0.0335971 3593 14 70 3 10.999 CCR7;GLP1R;PKD2 Cluster70 DNA integrity checkpoint 0.00272456 0.0383457 3593 15 70 3 10.2657 BRCC3;CDC45;E2F1 Cluster70 DNA-dependent DNA replication 0.00272456 0.0383457 3593 15 70 3 10.2657 APITD1;CDC45;GINS2 Cluster70 cellular metabolic process 0.00367407 0.0498624 3593 1512 70 41 1.39185 APITD1;ARNTL2;BRCC3;C9orf3;CDC45;CEBPA;CHAF1B;DBNL;DGCR8;DHFR;E2F1;ELAC1;ESCO2;FLT3;FUS;GINS2;GINS3;GLP1R;HIST2H3A;LCMT2;MAP6D1;NCOA5;POLR3H;PRMT6;PSEN2;RAB40A;RAD51D;SFPQ;SLC19A1;SPHK2;SRRT;STS;TCF7;TREX2;TUBB1;UCP3;XYLB;ZFHX2;ZNF235;ZNF268;ZNF778 Cluster76 macromolecular complex assembly 0.000468843 0.00503918 3593 179 4 3 15.0545 ANGPT4;HIST3H2BB;OAS1 Cluster76 macromolecular complex subunit organization 0.000559909 0.00503918 3593 190 4 3 14.1829 ANGPT4;HIST3H2BB;OAS1 Cluster76 cellular component assembly 0.00220665 0.0112402 3593 302 4 3 8.92301 ANGPT4;HIST3H2BB;OAS1 Cluster76 cellular component biogenesis 0.00249783 0.0112402 3593 315 4 3 8.55476 ANGPT4;HIST3H2BB;OAS1 Cluster76 immune system process 0.00575562 0.0207202 3593 419 4 3 6.43138 ANGPT4;CD79B;OAS1 Cluster86 multicellular organismal process 0.000195039 0.0130639 3593 1766 12 12 2.03454 APCDD1;CCBE1;CD4;CHI3L1;CITED2;CNTNAP3;COL9A1;NAALAD2;SCN2B;SEMA6D;SGCA;STRC Cluster86 system development 0.000378663 0.0130639 3593 1154 12 10 2.5946 APCDD1;CCBE1;CD4;CHI3L1;CITED2;COL9A1;SCN2B;SEMA6D;SGCA;STRC Cluster86 anatomical structure development 0.000853266 0.0196251 3593 1261 12 10 2.37444 APCDD1;CCBE1;CD4;CHI3L1;CITED2;COL9A1;SCN2B;SEMA6D;SGCA;STRC Cluster86 multicellular organismal development 0.00118125 0.0203766 3593 1307 12 10 2.29087 APCDD1;CCBE1;CD4;CHI3L1;CITED2;COL9A1;SCN2B;SEMA6D;SGCA;STRC Cluster86 developmental process 0.00216477 0.0298739 3593 1398 12 10 2.14175 APCDD1;CCBE1;CD4;CHI3L1;CITED2;COL9A1;SCN2B;SEMA6D;SGCA;STRC Cluster87 feeding behavior 6.97519e-06 0.000258082 3593 33 5 3 65.3273 APLN;FOS;TRH Cluster87 cellular response to hormone stimulus 0.000363469 0.00672417 3593 122 5 3 17.6705 FOS;PCSK9;TRH Cluster87 positive regulation of transport 0.000857079 0.00851517 3593 163 5 3 13.2258 APLN;PCSK9;TRH Cluster87 behavior 0.000920558 0.00851517 3593 167 5 3 12.909 APLN;FOS;TRH Cluster87 cellular response to endogenous stimulus 0.00116659 0.00863278 3593 181 5 3 11.9105 FOS;PCSK9;TRH Cluster87 response to hormone stimulus 0.00324662 0.0200208 3593 257 5 3 8.38833 FOS;PCSK9;TRH Cluster87 regulation of transport 0.00542355 0.0247938 3593 307 5 3 7.02215 APLN;PCSK9;TRH Cluster87 cellular response to organic substance 0.00638671 0.0247938 3593 325 5 3 6.63323 FOS;PCSK9;TRH Cluster87 response to endogenous stimulus 0.00667209 0.0247938 3593 330 5 3 6.53273 FOS;PCSK9;TRH Cluster87 cellular response to stimulus 0.00712778 0.0247938 3593 1338 5 5 2.68535 APLN;ATRNL1;FOS;PCSK9;TRH Cluster87 cell communication 0.00737112 0.0247938 3593 1347 5 5 2.66741 APLN;ATRNL1;FOS;PCSK9;TRH Cluster87 regulation of localization 0.0143263 0.0440754 3593 432 5 3 4.99028 APLN;PCSK9;TRH Cluster87 cellular response to chemical stimulus 0.0158655 0.0440754 3593 448 5 3 4.81205 FOS;PCSK9;TRH Cluster87 positive regulation of cellular process 0.0166772 0.0440754 3593 915 5 4 3.14142 APLN;FOS;PCSK9;TRH Cluster118 induction of apoptosis 4.92719e-05 0.00293839 3593 108 8 4 16.6343 BCL3;BIK;TGFB3;TPD52L1 Cluster118 induction of programmed cell death 5.11024e-05 0.00293839 3593 109 8 4 16.4817 BCL3;BIK;TGFB3;TPD52L1 Cluster118 positive regulation of apoptotic process 0.00029174 0.00784571 3593 170 8 4 10.5676 BCL3;BIK;TGFB3;TPD52L1 Cluster118 positive regulation of programmed cell death 0.000312215 0.00784571 3593 173 8 4 10.3844 BCL3;BIK;TGFB3;TPD52L1 Cluster118 positive regulation of cell death 0.000341118 0.00784571 3593 177 8 4 10.1497 BCL3;BIK;TGFB3;TPD52L1 Cluster118 regulation of protein transport 0.000436181 0.00836014 3593 74 8 3 18.2078 BCL3;TGFB3;TWIST1 Cluster118 regulation of establishment of protein localization 0.000549336 0.0090248 3593 80 8 3 16.8422 BCL3;TGFB3;TWIST1 Cluster118 regulation of protein localization 0.000752111 0.00993118 3593 89 8 3 15.139 BCL3;TGFB3;TWIST1 Cluster118 regulation of transmembrane transport 0.000777223 0.00993118 3593 90 8 3 14.9708 BCL3;TGFB3;TWIST1 Cluster118 regulation of organelle organization 0.00143516 0.0165043 3593 111 8 3 12.1385 BIK;ESPN;TWIST1 Cluster118 regulation of cytokine production 0.00175662 0.0183647 3593 119 8 3 11.3225 BCL3;TGFB3;TWIST1 Cluster118 regulation of cellular protein metabolic process 0.00207275 0.0198639 3593 284 8 4 6.3257 BCL3;TGFB3;TPD52L1;TWIST1 Cluster118 protein transport 0.00348739 0.0288076 3593 151 8 3 8.92301 BCL3;SNX31;TGFB3 Cluster118 positive regulation of cellular component organization 0.00375779 0.0288076 3593 155 8 3 8.69274 BIK;TGFB3;TWIST1 Cluster118 establishment of protein localization 0.00389776 0.0288076 3593 157 8 3 8.58201 BCL3;SNX31;TGFB3 Cluster118 regulation of protein metabolic process 0.00400802 0.0288076 3593 339 8 4 5.29941 BCL3;TGFB3;TPD52L1;TWIST1 Cluster118 regulation of apoptotic process 0.00489996 0.0312071 3593 358 8 4 5.01816 BCL3;BIK;TGFB3;TPD52L1 Cluster118 regulation of cellular component organization 0.00489996 0.0312071 3593 358 8 4 5.01816 BIK;ESPN;TGFB3;TWIST1 Cluster118 regulation of programmed cell death 0.00515595 0.0312071 3593 363 8 4 4.94904 BCL3;BIK;TGFB3;TPD52L1 Cluster118 regulation of cell death 0.00564003 0.0314615 3593 372 8 4 4.8293 BCL3;BIK;TGFB3;TPD52L1 Cluster118 regulation of cellular localization 0.00574514 0.0314615 3593 180 8 3 7.48542 BCL3;TGFB3;TWIST1 Cluster118 positive regulation of cellular protein metabolic process 0.00649435 0.0339477 3593 188 8 3 7.16689 BCL3;TGFB3;TPD52L1 Cluster118 positive regulation of multicellular organismal process 0.00719694 0.0359847 3593 195 8 3 6.90962 BCL3;TGFB3;TWIST1 Cluster118 positive regulation of protein metabolic process 0.00873747 0.041867 3593 209 8 3 6.44677 BCL3;TGFB3;TPD52L1 Cluster118 positive regulation of transcription from RNA polymerase II promoter 0.0104639 0.0458262 3593 223 8 3 6.04204 BCL3;TGFB3;TWIST1 Cluster118 apoptotic process 0.0108586 0.0458262 3593 226 8 3 5.96184 BIK;TPD52L1;TWIST1 Cluster118 programmed cell death 0.0109922 0.0458262 3593 227 8 3 5.93557 BIK;TPD52L1;TWIST1 Cluster118 regulation of protein phosphorylation 0.0113987 0.0458262 3593 230 8 3 5.85815 TGFB3;TPD52L1;TWIST1 Cluster118 negative regulation of cellular macromolecule biosynthetic process 0.0116747 0.0458262 3593 232 8 3 5.80765 BCL3;TGFB3;TWIST1 Cluster118 protein localization 0.0119547 0.0458262 3593 234 8 3 5.75801 BCL3;SNX31;TGFB3 Cluster118 negative regulation of macromolecule biosynthetic process 0.0134149 0.0474454 3593 244 8 3 5.52203 BCL3;TGFB3;TWIST1 Cluster118 negative regulation of nucleobase-containing compound metabolic process 0.0134149 0.0474454 3593 244 8 3 5.52203 BCL3;TGFB3;TWIST1 Cluster118 negative regulation of nitrogen compound metabolic process 0.0138727 0.0474454 3593 247 8 3 5.45496 BCL3;TGFB3;TWIST1 Cluster118 regulation of phosphorylation 0.0140273 0.0474454 3593 248 8 3 5.43296 TGFB3;TPD52L1;TWIST1 Cluster118 regulation of protein modification process 0.014816 0.0474716 3593 253 8 3 5.32559 TGFB3;TPD52L1;TWIST1 Cluster118 positive regulation of macromolecule metabolic process 0.0155302 0.0474716 3593 493 8 4 3.64402 BCL3;TGFB3;TPD52L1;TWIST1 Cluster118 positive regulation of cellular metabolic process 0.0157535 0.0474716 3593 495 8 4 3.62929 BCL3;TGFB3;TPD52L1;TWIST1 Cluster118 regulation of phosphate metabolic process 0.0164709 0.0474716 3593 263 8 3 5.1231 TGFB3;TPD52L1;TWIST1 Cluster118 regulation of phosphorus metabolic process 0.0164709 0.0474716 3593 263 8 3 5.1231 TGFB3;TPD52L1;TWIST1 Cluster118 cell death 0.0166421 0.0474716 3593 264 8 3 5.10369 BIK;TPD52L1;TWIST1 Cluster118 death 0.0169877 0.0474716 3593 266 8 3 5.06532 BIK;TPD52L1;TWIST1 Cluster118 negative regulation of cellular biosynthetic process 0.0173375 0.0474716 3593 268 8 3 5.02752 BCL3;TGFB3;TWIST1 Cluster118 negative regulation of biosynthetic process 0.0184122 0.0492418 3593 274 8 3 4.91743 BCL3;TGFB3;TWIST1 Cluster122 stem cell differentiation 0.000134676 0.0102354 3593 39 10 3 27.6385 MSX2;PAX7;SOX10 Cluster122 developmental growth 0.000803486 0.0274534 3593 71 10 3 15.1817 MSX2;PAX7;SOX10 Cluster122 negative regulation of programmed cell death 0.00126192 0.0274534 3593 191 10 4 7.52461 MSX2;PAX7;PLCG2;SOX10 Cluster122 negative regulation of cell death 0.00144491 0.0274534 3593 198 10 4 7.25859 MSX2;PAX7;PLCG2;SOX10 Cluster128 positive regulation of cellular process 4.33404e-05 0.00401312 3593 915 12 10 3.27231 CDKN1A;CX3CL1;CYP1A1;ID4;IGFBP2;MAL;ONECUT1;SPHK1;SPRY2;VTN Cluster128 positive regulation of biological process 0.000106735 0.00401312 3593 1007 12 10 2.97335 CDKN1A;CX3CL1;CYP1A1;ID4;IGFBP2;MAL;ONECUT1;SPHK1;SPRY2;VTN Cluster128 positive regulation of cell migration 0.000156325 0.00401312 3593 90 12 4 13.3074 CX3CL1;ONECUT1;SPHK1;VTN Cluster128 positive regulation of cell motility 0.000163217 0.00401312 3593 91 12 4 13.1612 CX3CL1;ONECUT1;SPHK1;VTN Cluster128 positive regulation of cellular component movement 0.000185221 0.00401312 3593 94 12 4 12.7411 CX3CL1;ONECUT1;SPHK1;VTN Cluster128 positive regulation of locomotion 0.000185221 0.00401312 3593 94 12 4 12.7411 CX3CL1;ONECUT1;SPHK1;VTN Cluster128 positive regulation of cell proliferation 0.000698226 0.0129671 3593 241 12 5 6.21196 CDKN1A;CX3CL1;ID4;IGFBP2;SPHK1 Cluster128 regulation of cell migration 0.00108381 0.0146834 3593 149 12 4 8.03803 CX3CL1;ONECUT1;SPHK1;VTN Cluster128 regulation of mitotic cell cycle 0.00110669 0.0146834 3593 65 12 3 13.8192 CDKN1A;CYP1A1;SPHK1 Cluster128 regulation of cell motility 0.00119747 0.0146834 3593 153 12 4 7.82789 CX3CL1;ONECUT1;SPHK1;VTN Cluster128 regulation of cell proliferation 0.00124244 0.0146834 3593 421 12 6 4.26722 CDKN1A;CX3CL1;ID4;IGFBP2;SPHK1;SPRY2 Cluster128 regulation of cellular component movement 0.0014838 0.0160745 3593 162 12 4 7.393 CX3CL1;ONECUT1;SPHK1;VTN Cluster128 regulation of protein transport 0.00161464 0.0161464 3593 74 12 3 12.1385 CDKN1A;CX3CL1;SPHK1 Cluster128 regulation of locomotion 0.00177632 0.0164944 3593 170 12 4 7.0451 CX3CL1;ONECUT1;SPHK1;VTN Cluster128 regulation of establishment of protein localization 0.00202331 0.0175354 3593 80 12 3 11.2281 CDKN1A;CX3CL1;SPHK1 Cluster128 negative regulation of apoptotic process 0.00263028 0.0198565 3593 189 12 4 6.33686 CDKN1A;CX3CL1;SPHK1;SPRY2 Cluster128 negative regulation of programmed cell death 0.00273426 0.0198565 3593 191 12 4 6.27051 CDKN1A;CX3CL1;SPHK1;SPRY2 Cluster128 regulation of protein localization 0.00274936 0.0198565 3593 89 12 3 10.0927 CDKN1A;CX3CL1;SPHK1 Cluster128 regulation of membrane potential 0.00302301 0.0202853 3593 92 12 3 9.76359 CX3CL1;ID4;MAL Cluster128 negative regulation of cell death 0.00312081 0.0202853 3593 198 12 4 6.04882 CDKN1A;CX3CL1;SPHK1;SPRY2 Cluster128 regulation of cell growth 0.00341345 0.0211309 3593 96 12 3 9.35677 CDKN1A;IGFBP2;SPHK1 Cluster128 response to oxygen levels 0.00394371 0.0233037 3593 101 12 3 8.89356 CDKN1A;CX3CL1;CYP1A1 Cluster128 regulation of apoptotic process 0.00418579 0.0236588 3593 358 12 5 4.1818 CDKN1A;CX3CL1;MAL;SPHK1;SPRY2 Cluster128 regulation of programmed cell death 0.00444919 0.0240998 3593 363 12 5 4.1242 CDKN1A;CX3CL1;MAL;SPHK1;SPRY2 Cluster128 regulation of cell death 0.00495376 0.0257595 3593 372 12 5 4.02442 CDKN1A;CX3CL1;MAL;SPHK1;SPRY2 Cluster128 regulation of cell adhesion 0.00582948 0.0291474 3593 116 12 3 7.74353 CX3CL1;ONECUT1;VTN Cluster128 regulation of protein modification process 0.00756615 0.0364296 3593 253 12 4 4.73386 CDKN1A;SPHK1;SPRY2;VTN Cluster128 response to inorganic substance 0.00853528 0.0396281 3593 133 12 3 6.75376 CDKN1A;CYP1A1;IGFBP2 Cluster128 response to drug 0.00926415 0.0409574 3593 137 12 3 6.55657 CDKN1A;CYP1A1;IGFBP2 Cluster128 regulation of localization 0.00945171 0.0409574 3593 432 12 5 3.46547 CDKN1A;CX3CL1;ONECUT1;SPHK1;VTN Cluster128 response to extracellular stimulus 0.0104254 0.0422336 3593 143 12 3 6.28147 CDKN1A;CYP1A1;IGFBP2 Cluster128 negative regulation of catalytic activity 0.0106269 0.0422336 3593 144 12 3 6.23785 CDKN1A;SPRY2;VTN Cluster128 positive regulation of immune system process 0.0110369 0.0422336 3593 146 12 3 6.1524 CDKN1A;CX3CL1;IGFBP2 Cluster128 neurological system process 0.011239 0.0422336 3593 450 12 5 3.32685 CX3CL1;ID4;IGDCC3;MAL;SPRY2 Cluster128 regulation of cellular protein metabolic process 0.0113706 0.0422336 3593 284 12 4 4.21714 CDKN1A;SPHK1;SPRY2;VTN Cluster128 regulation of growth 0.0118848 0.0425671 3593 150 12 3 5.98833 CDKN1A;IGFBP2;SPHK1 Cluster128 developmental process 0.012327 0.0425671 3593 1398 12 9 1.92758 CDKN1A;CX3CL1;CYP1A1;ID4;IGFBP2;MAL;ONECUT1;SPHK1;SPRY2 Cluster128 negative regulation of biological process 0.01272 0.0425671 3593 882 12 7 2.37632 CDKN1A;CX3CL1;ID4;ONECUT1;SPHK1;SPRY2;VTN Cluster128 regulation of cell cycle 0.0127701 0.0425671 3593 154 12 3 5.83279 CDKN1A;CYP1A1;SPHK1 Cluster128 system development 0.0146487 0.0472368 3593 1154 12 8 2.07568 CDKN1A;CX3CL1;CYP1A1;ID4;MAL;ONECUT1;SPHK1;SPRY2 Cluster128 regulation of transport 0.0148978 0.0472368 3593 307 12 4 3.90119 CDKN1A;CX3CL1;SPHK1;VTN Cluster128 regulation of cellular process 0.0153762 0.047593 3593 2105 12 11 1.56465 CDKN1A;CX3CL1;CYP1A1;ID4;IGFBP2;MAL;ODZ2;ONECUT1;SPHK1;SPRY2;VTN Cluster148 small molecule metabolic process 0.00750183 0.0375091 3593 459 4 3 5.87092 CACNA1E;NPPA;SLC16A9 Cluster157 cell-cell adhesion 0.00104027 0.0218457 3593 139 6 3 12.9245 CDH23;CDH5;TNR Cluster164 regulation of signaling 0.0058439 0.0292195 3593 648 3 3 5.54475 CCKBR;FICD;NAT8L Cluster230 cell death 0.00148444 0.0113842 3593 264 4 3 10.2074 GRIK2;LMX1B;PAX3 Cluster230 death 0.00151789 0.0113842 3593 266 4 3 10.1306 GRIK2;LMX1B;PAX3