Binding Site Graphs: A New Graph Theoretical Framework for Prediction of Transcription Factor Binding Sites

Open Access

Peer-reviewed

Research Article

Timothy E Reddy,

Affiliation Program in Bioinformatics and Systems Biology, Boston University, Boston, Massachusetts, United States of America
⨯
Charles DeLisi,

Affiliations Program in Bioinformatics and Systems Biology, Boston University, Boston, Massachusetts, United States of America , Department of Biomedical Engineering, Boston University, Boston, Massachusetts, United States of America
⨯
Boris E Shakhnovich

*To whom correspondence should be addressed. E-mail: borya@acs.bu.edu

Affiliations Program in Bioinformatics and Systems Biology, Boston University, Boston, Massachusetts, United States of America , Department of Molecular and Cellular Biology, Harvard University, Cambridge, Massachusetts, United States of America
⨯

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Nucleotides
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Clustering coefficients
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Graphs
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Algorithms
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Saccharomyces cerevisiae
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Yeast
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Forecasting
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Sequence motif analysis
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