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Research Article

Evaluation of Paired-End Sequencing Strategies for Detection of Genome Rearrangements in Cancer

  • Ali Bashir mail,

    abashir@ucsd.edu (AB); braphael@brown.edu (BJR)

    Affiliation: Bioinformatics Graduate Program, University of California San Diego, San Diego, California, United States of America

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  • Stanislav Volik,

    Affiliation: Comprehensive Cancer Center, University of California San Francisco, San Francisco, California, United States of America

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  • Colin Collins,

    Affiliation: Comprehensive Cancer Center, University of California San Francisco, San Francisco, California, United States of America

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  • Vineet Bafna,

    Affiliation: Department of Computer Science and Engineering, University of California San Diego, San Diego, California, United States of America

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  • Benjamin J. Raphael mail

    abashir@ucsd.edu (AB); braphael@brown.edu (BJR)

    Affiliation: Department of Computer Science and Center for Computational Molecular Biology, Brown University, Providence, Rhode Island, United States of America

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  • Published: April 25, 2008
  • DOI: 10.1371/journal.pcbi.1000051

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