From Principal Component to Direct Coupling Analysis of Coevolution in Proteins: Low-Eigenvalue Modes are Needed for Structure Prediction

Open Access

Peer-reviewed

Research Article

Simona Cocco,

Affiliation Laboratoire de Physique Statistique de l'Ecole Normale Supérieure - UMR 8550, associé au CNRS et à l'Université Pierre et Marie Curie, Paris, France
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Remi Monasson,

Affiliation Laboratoire de Physique Théorique de l'Ecole Normale Supérieure - UMR 8549, associé au CNRS et à l'Université Pierre et Marie Curie, Paris, France
⨯
Martin Weigt

* E-mail: martin.weigt@upmc.fr

Affiliations Université Pierre et Marie Curie, UMR 7238 - Laboratoire de Génomique des Microorganismes, Paris, France, Human Genetics Foundation, Torino, Italy
⨯

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Eigenvalues
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Principal component analysis
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Sequence alignment
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Protein structure prediction
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Multiple alignment calculation
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Statistical models
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Protein structure
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Protein structure comparison
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