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Algorithms to Model Single Gene, Single Chromosome, and Whole Genome Copy Number Changes Jointly in Tumor Phylogenetics

  • Salim Akhter Chowdhury,

    Affiliations Joint Carnegie Mellon/University of Pittsburgh Ph.D. Program in Computational Biology, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America, Lane Center for Computational Biology, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America

  • Stanley E. Shackney,

    Affiliation Intelligent Oncotherapeutics, Pittsburgh, Pennsylvania, United States of America

  • Kerstin Heselmeyer-Haddad,

    Affiliation Genetics Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland, United States of America

  • Thomas Ried,

    Affiliation Genetics Branch, Center for Cancer Research, NCI, NIH, Bethesda, Maryland, United States of America

  • Alejandro A. Schäffer,

    Affiliation Computational Biology Branch, NCBI, NIH, Bethesda, Maryland, United States of America

  • Russell Schwartz

    russells@andrew.cmu.edu

    Affiliations Lane Center for Computational Biology, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America, Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America

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