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Practical Guidelines for the Comprehensive Analysis of ChIP-seq Data

  • Timothy Bailey ,

    t.bailey@imb.uq.edu.au (TB); pmad@igr.poznan.pl (PM)

    All authors contributed equally to this manuscript.

    Affiliation Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia

  • Pawel Krajewski ,

    All authors contributed equally to this manuscript.

    Affiliation Department of Biometry and Bioinformatics, Institute of Plant Genetics, Polish Academy of Sciences, Poznań, Poland

  • Istvan Ladunga ,

    All authors contributed equally to this manuscript.

    Affiliation Department of Statistics, Beadle Center, University of Nebraska-Lincoln, Lincoln, Nebraska, United States of America

  • Celine Lefebvre ,

    All authors contributed equally to this manuscript.

    Affiliation Inserm U981, Cancer Institute Gustave Roussy, Villejuif, France

  • Qunhua Li ,

    All authors contributed equally to this manuscript.

    Affiliation Department of Statistics, Penn State University, University Park, Pennsylvania, United States of America

  • Tao Liu ,

    All authors contributed equally to this manuscript.

    Affiliation Department of Biochemistry, University at Buffalo, Buffalo, New York, United States of America

  • Pedro Madrigal ,

    t.bailey@imb.uq.edu.au (TB); pmad@igr.poznan.pl (PM)

    All authors contributed equally to this manuscript.

    Affiliation Department of Biometry and Bioinformatics, Institute of Plant Genetics, Polish Academy of Sciences, Poznań, Poland

  • Cenny Taslim ,

    All authors contributed equally to this manuscript.

    Affiliation Department of Biomedical Informatics, The Ohio State University, Columbus, Ohio, United States of America

  • Jie Zhang

    All authors contributed equally to this manuscript.

    Affiliation Department of Biomedical Informatics, The Ohio State University, Columbus, Ohio, United States of America

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